New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3026426 =	32 (0.610)	4 (0.080)	5/244	NT	11.0%	coding (210/1800 nt)	PP_2641	iron‑sulfur cluster‑binding protein
	?	NC_002947	3026446 =	34 (0.670)					coding (190/1800 nt)	PP_2641	iron‑sulfur cluster‑binding protein

GTATTTCCAGGCGCATGTCGCTGCAGGCGTGGCTCTGGCACAGCAACATCTCGTCGGCGGCCAAGGGATAGGACGGCGGCGGTGTGTCCGCATCCCGCTGCTTGTCCTGATGCTGCCCTGAGACCACCTTGACC‑TTGCACGAGCCGCAGGCGCC‑GCGGCGGCAGGAAAAGGGTACCGGCAGGCCGCTGGCGAGCATGGCATCGAGCAGCAGCTCCTGGCTGGCTTCGAAGGTTTTGCCCGAGGGCGACAATTCAATGACGTGGCGGCTTTGCATGAGCACCTCGGGGC  >  NC_002947/3026284‑3026571                                                                                                                                                |                                                                                                                                                   gTATTTCCAGGCGCATGTCGCTGCAGGCGTGGCTCTGGCACAGCAACATCTCGTCGGCGGCCAAGGGATAGGACGGCGGCGGTGTGTCCGCATCCCGCTGCTTGTCCTGATGCTGCCCTGAGACCACCTTGACC‑TTGCACGAGCCGCAg                                                                                                                                              <  2:160381/149‑1 (MQ=255) caatcgaacctccatttgccccgaggtgctcatgcaaagccgccacgtcattgaattgtcgccctcgggcaaaaccttcgaagccagccaggagctgctgctcgatgccatgctcgccagcggcctgccggtacccttttcctGCCg                                                                                                                                                 <  1:152458‑M1/4‑1 (MQ=255)    tttCCAGGCGCATGTCGCTGCAGGCGTGGCTCTGGCACAGCAACATCTCGTCGGCGGCCAAGGGATAGGACGGCGGCGGTGTGTCCGCATCCCGCTGCTTGTCCTGATGCTGCCCTGAGACCACCTTGACC‑TTGCACGAGCCGCAGgcg                                                                                                                                           >  7:42094/1‑149 (MQ=255)           gcgcATGTCGCTGCAGGCGTGGCTCTGGCACAGCAACATCTCGTCGGCGGCCAAGGGATAGGACGGCGGCGGTGTGTCCGCATCCCGCTGCTTGTCCTGATGCTGCCCTGAGACCACCTTGACC‑TTGCACGAGCCGCAGGCGCC‑gcggc                                                                                                                                   <  5:244853/149‑1 (MQ=255)               aTGTCGCTGCAGGCGTGGCTCTGGCACAGCAACATCTCGTCGGCGGCCAAGGGATAGGACGGCGGCGGTGTGTCCGCATCCCGCTGCTTGTCCTGATGCTGCCCTGAGACCACCTTGACC‑TTGCACGAGCCGCAGGCGCC‑GCGGCGGCa                                                                                                                               <  7:154115/149‑1 (MQ=255)                      tGCAGGCGTGGCTCTGGCACAGCAACATCTCGTCGGCGGCCGAGGGATAGGACGGCGGCGGTGTGTCCGCATCCCGCTGCTTGTCCTGATGCTGCCCTGAGACCACCTTGACC‑TTGCACGAGCCGCAGGCGCC‑GCGGCGGCAGGAAAAg                                                                                                                        >  6:108759/1‑149 (MQ=255)                        cAGGCGTGGCTCTGGCACAGCAACATCTCGTCGGCGGCCAAGGGATAGGACGGCGGCGGTGTGTCCGCATCCCGCTGCTTGTCCTGATGCTGCCCTGAGACCACCTTGACC‑TTGCACGAGCCGCAGGCGCC‑GCGGCGGCAGGAAAAgg                                                                                                                       <  3:171520/148‑1 (MQ=255)                                atgcaaagccgccacgtcattgaattgtcgccctcgggcaaaaccttcgaagccagccaggagctgctgctcgatgccatgctcgccagcggcctgccggtacccttttcctGcc                                                                                                                                                  <  4:180343‑M1/3‑1 (MQ=255)                                atgcaaagccgccacgtcattgaattgtcgccctcgggcaaaaccttcgaagccagccaggagctgctgctcgatgccatgctcgccagcggcctgccggtacccttttcctGcc                                                                                                                                                  >  3:180343‑M1/113‑115 (MQ=255)                                      gCACAGCAACATCTCGTCGGCGGCCAAGGGATAGGACGGCGGCGGTGTGTCCGCAACCCGCTGCTAGTCCTCATGCTGCCCTGAGACCACCTTGACC‑TTGCACGAGCCGCAGGCGCC‑GCGGCGGCAGGAAAAGGGTACCGGCAGGCCGc                                                                                                        >  1:242652/1‑149 (MQ=255)                                         caGCAACATCTCGTCGGCGGCCAAGGGATAGGACGGCGGCGGTGTGTCCGCATCCCGCTGCTTGTCCTGATGCTGCCCTGAGACCACCTTGACC‑TTGCACGAGCCGCAGGCGCC‑GCGGCGGCAGGAAAAGGGTACCGGCAGGCCGCTgg                                                                                                     <  8:42094/149‑1 (MQ=255)                                                       cggcggCCAAGGGATAGGACGGCGGCGGTGTGTCCGCATCCCGCTGCTTGTCCTGATGCTGCCCTGAGACCACCTTGACC‑TTGCACGCGCCGCAGGCGCC‑GCGGCGGCAGGAAAAGGGTACCGGCAGGCCGCTGGCGAGCATGGCATc                                                                                        >  2:268866/1‑148 (MQ=255)                                                                  ggATAGGACGGCGGCGGTGTGTCCGCATCCCGCTGCTTGTCCTGATGCTGCCCTGAGACCACCTTGACC‑TTGCACGAGCCGCAGGCGCC‑GCGGCGGCAGGAAAAGGGTACCGGCAGGCCGCTGGCGAGCATGGCATCGAGCAGCAGCTc                                                                            >  3:259575/1‑149 (MQ=255)                                                                    aTAGGACGGCGGCGGTGTGTCCGCATCACGCTGCTTGTCCTGATGCTGCCCTGAGACCACCTTGACC‑TTGCACGAGCCGCAGGCGCC‑GCGGCGGCAGGAAAAGGGTACCGGCAGGCCGCTGGCGAGCATGGCATCGAGCAGCAGCTCct                                                                          >  2:200630/1‑149 (MQ=255)                                                                             ttcgaagccagccaggagctgctgctcgatgccatgctcgccagcggcctgccggtacccttttcctGCCGCAGGCGCC‑GCGGCGGCAGGaaaa                                                                                                                         >  5:289359‑M1/68‑94 (MQ=255)                                                                             ttcgaagccagccaggagctgctgctcgatgccatgctcgccagcggcctgccggtacccttttcctGCCGCAGGCGCC‑GCGGCGGCAGGaaaa                                                                                                                         <  6:289359‑M1/27‑1 (MQ=255)                                                                                     tgtCCGCATCCCGCTGCTTGTCCTGATGCTGCCCTGAGACCACCTTGACC‑TTGCACGAGCCGCAGGCGCC‑GCGGCGGCAGGAAAAGGGTACCGGCAGGCCGCTGGCGAGCATGGCATCGAGCAGCAGCTCCTGGCTGGCTTCGAAGGt                                                          <  2:242652/148‑1 (MQ=255)                                                                                       tCCGCATCCCGCTGCTTGTCCTGATGCTGCCCTGAGACCACCTTGACC‑TTGCACGAGCCGCAGGCGCC‑GCGGCGGCAGGAAAAGGGTACCGGCAGGCCGCTGGCGAGCATGGCATCGAGCAGCAGCTCCTGGCTGGCTTCGAAGGtttt                                                       >  1:89529/1‑149 (MQ=255)                                                                                          gCATCCCGCTGCTTGTCCTGATGCTGCCCTGAGACCACCTTGACC‑TTGCACGAGCCGCAGGCGCC‑GCGGCGGCAGGAAAAGGGTACCGGCAGGCCGCTGGc                                                                                                    <  1:83384/101‑1 (MQ=255)                                                                                          gCATCCCGCTGCTTGTCCTGATGCTGCCCTGAGACCACCTTGACC‑TTGCACGAGCCGCAGGCGCC‑GCGGCGGCAGGAAAAGGGTACCGGCAGGCCGCTGGc                                                                                                    >  2:83384/1‑101 (MQ=255)                                                                                          gCATCCCGCTGCTTGTCCTGATGCTGCCCTGAGACCACCTTGACC‑TTGCACGAGCCGCAGGCGCC‑GCGGCGGCAGGAAAAGGGTACCGGCAGGCCGCTGGCGAGCATGGCATCGAGCAGCAGCTCCTGGCTGGCTTCGAAGGTTTTGcc                                                    >  1:80469/1‑149 (MQ=255)                                                                                             tCCCGCTGCTTGTCCTGATGCTGCCCTGAGACCACCTTGACC‑TTGCACGAGCCGCAGGCGCC‑GCGGCGGCAGGAAAAGGGTACCGGCAGGCCGCTGGCGAGCATGGCATCGAGCAGCAGCTCCAGGCTGGCTAGGAAGGATTTGccc                                                   >  3:258430/1‑147 (MQ=255)                                                                                               ccGCTGCTTGTCCTGATGCTGCCCTGAGACCACCTTGACC‑TTGCACGAGCCGCAGGCGCC‑GCGGCGGCAGGAAAAGGGTACCGGCAGGCCGCTGGCGAGCATGGCATCGAGCAGCAGCTCCTGGCTGGCTTCGAAGGTTTTGCCCGAgg                                               <  2:89529/149‑1 (MQ=255)                                                                                               ccGCTGCTTGTCCTGATGCTGCCCTGAGACCACCTTGACC‑TTGCACGAGCCGCAGGCGCC‑GCGGCGGCAGGAAAAGGGTACCGGCAGGCCGCTGGCGAGCATGGCATCGAGCAGCAGCTCCTGGCTGGCTTCGAAGGTTTTGCCCGAg                                                <  2:80469/148‑1 (MQ=255)                                                                                                   tgctTGTCCTGATGCTGCCCTGAGACCACCTTGACC‑TTGCACGAGCCGCAGGCGCC‑GCGGCGGCAGGAAAAGGGTACCGGCAGGCCGCTGGCGAGCATGGCATCGAGCAGCAGCTCCTGGCTGGCTTCGAAGGTTTTGCCCGAGGGCGa                                           <  4:259575/149‑1 (MQ=255)                                                                                                    gctTGTCCTGATGCTGCCCTGAGACCACCTTGACCTTTGCACGAGCCGCAGGCGCC‑GCGGCGGCAGGAAAAGGGTACCGGCAGGCCGCTGGCGAGCATGGCATCGAGCAGCAGCTCCTGGCTGGCTTCGAAg                                                            >  1:57593/1‑132 (MQ=255)                                                                                                    gctTGTCCTGATGCTGCCCTGAGACCACCTTGACC‑TTGCACGAGCCGCAGGCGCC‑GCGGCGGCAGGAAAAGGGTACCGGCAGGCCGCTGGCGAGCATGGCATCGAGCAGCAGCTCCTGGCTGGCTTCGAAg                                                            <  2:57593/131‑1 (MQ=255)                                                                                                         tCCTGATGCTGCCCTGAGACCACCTTGACC‑TTGCACGAGCCGCAGGCGCC‑GCGGCGGCAGGAAAAGGGTACCGGCAGGCCGCTGGCGAGCATGGCATCGAGCAGCAGCTCCTGGCTGGCTTCGAAGGTTTTGCCCGAGGGCGACAAtt                                      >  1:340616/1‑148 (MQ=255)                                                                                                             gATGCTGCCCTGAGCCCACCTTGACC‑TTGCACGAGCCGCAGGCGCC‑GCGGCGGCAGGAAAAGGGTACCGGCCGGCCGCTGGCGAGCATGGCATCGAGCAGCAGCTCCTGGCTGGCTTCGAAGGTTTTGCCCGAGGGCGACACTTCCATg                                 >  4:103793/1‑149 (MQ=255)                                                                                                                    cccTGAGACCACCTTGACC‑TTGCACGAGCCGCAGGCGCC‑GCGGCGGCAGGAAAAGGGTACCGGCAGGCCGCTGGCGAGCATGGCATCGAGCAGCAGCTCCTGGCTGGCTTCGAAGGTTTTGCCCGAGGGCGACAATTCAATGACGTg                            <  7:68600/147‑1 (MQ=255)                                                                                                                         agaCCACCTTGACC‑TTGCACGAGCCGCAGGCGCC‑GCGGCGGCAGGAAAAGGGTACCGGCAGGCCGCTGGCGAGCATGGCATCGAGCAGCAGCTCCTGGCTGGCTTCGAAGGTTTTGCCCGAGGGCGACAATTCAATGACGTGGCGGCt                      <  5:108759/148‑1 (MQ=255)                                                                                                                           accaccTTGACC‑TTGCACGAGCCGCAGGCGCC‑GCGGCGGCAGGAAAAGGGTACCGGCAGGCCGCTGGCGAGCATGGCATCGAGCAGCAGCTCCTGGCTGGCTTCGAAGGTTTTGCCCGAGGGCGACAATTCAATGACGTGGCGGCTTTg                   >  3:146025/1‑149 (MQ=255)                                                                                                                              accttgacc‑ttgCACGAGCCGCAGGCGCC‑GCGGCGGCAGGAAAAGGGTACCGGCAGGCCGCTGGCGAGCATGGCATCGAGCAGCAGCTCCTGGCTGGCTTCGAAGGTTTTGCCCGAGGGCGACAATTCAATGACGTGGCGGCTTTGCAt                >  5:81090/1‑149 (MQ=255)                                                                                                                                cttgacc‑ttgCACGAGCCGCAGGCGCC‑GCGGCGGCAGGAAAAGGGTACCGGCAGGCCGCTGGCGAGCATGGCATCGAGCAGCAGCTCCTGGCTGGCTTCGAAGGTTTTGCCCGAGGGCGACAATTCAATGACGTGGCGGCTTTGCAt                >  7:74577/1‑147 (MQ=255)                                                                                                                                      cccttttcctGCCGCCGCGGCG‑CCTGCGGCAGGAAAAGGGTACCGGCAGGCCGCTGGCGAGCATGGCATCGAGCAGCAGCTCCTGGCTGGCTTCGAAGGTTTTGCCCGAGGGCGACAATTCaa                                   <  8:6030‑M1/113‑1 (MQ=255)                                                                                                                                      cccttttcctGCCGCCGCGGCG‑CCTGCGGCAGGAAAAGGGTACCGGCAGGCCGCTGGCGAGCATGGCATCGAGCAGCAGCTCCTGGCTGGCTTCGAAGGTTTTGCCCGAGGGCGACAATTCaa                                   >  7:6030‑M1/11‑123 (MQ=255)                                                                                                                                      c‑ttgCACGAGCCGCAGGCGCC‑GCGGCGGCAGGAAAAGGGTACCGGCAGGCCGCTGGCGAGCATGGCATCGAGCAGCAGCTCCTGGCTGGCTTCGAAGGTTTTGCCCGAGGGCGACAATTCAATGACGTGGCGGCTTTGCATGAGCACCt        >  7:55286/1‑149 (MQ=255)                                                                                                                                        ttgCACGAGCCGCAGGCGCC‑GCGGCGGCAGGAAAAGGGTACCGGCAGGCCGCTGGCGAGCATGGCATCGAGCAGCAGCTCCTGGCTGGCTTCGAAGGTTTTGCCCGAGGGCGACAATTCAATGACGTGGCGGCTTTGCAt                >  7:313893/1‑140 (MQ=255)                                                                                                                                        ttgCACGAGCCGCAGGCGCC‑GCGGCGGCAGGAAAAGGGTACCGGCAGGCCGCTGGCGAGCATGGCATCGAGCAGCAGCTCCTGGCTGGCTTCGAAGGTTTTGCCCGAGGGCGACAATTCAATGACGTGGCGGCTTTGCAt                <  8:313893/140‑1 (MQ=255)                                                                                                                                           cACGAGCCGCAGGCGCC‑GCAGCGGCAGGAAAAGGGTACCGGCAGGCCGCTGGCGAGCATGGCATCGAGCAGCAGCTCCTGGCTGGCTTCGAAGGTTTTGCCCGAGGGCGACAATTCAATGACGTGGCGGCTTTGCATGAGCACCTCggg    >  2:152458/1‑149 (MQ=255)                                                                                                                                            tgccGCCGC‑GGCGCCTGCGGCGGCAGGAAAAGGGTACCGGCAGGCCGCTGGCGAGCATGGCATCGAGCAGCAGCTCCTGGCTGGCTTCGAAGGTTTTGCCCGAGGGCGACAATTCAATGACGTGGCGGCTTTGCATGAGCACCTCgggg   <  6:332803‑M1/145‑1 (MQ=255)                                                                                                                                            aCGAGCCGCAGGCGCC‑GCGGCGGCAGGAAAAGGGTACCGGCAGGCCGCTGGCGAGCATGGCATCGAGCAGCAGCTCCTGGCTGGCTTCGAAGGTTTTGCCCGAGGGCGACAATTCAATGACGTGGCGGCTTTGCATGa              >  3:272775/1‑138 (MQ=255)                                                                                                                                            aCGAGCCGCAGGCGCC‑GCGGCGGCAGGAAAAGGGTACCGGCAGGCCGCTGGCGAGCATGGCATCGAGCAGCAGCTCCTGGCTGGCTTCGAAGGTTTTGCCCGAGGGCGACAATTCAATGACGTGGCGGCTTTGCATGa              <  4:272775/138‑1 (MQ=255)                                                                                                                                            aCGAGCCGCAGGCGCC‑GCGGCGGCAGGAAAAGGGTACCGGCAGGCCGCTGGCGAGCATGGCATCGAGCAGCAGCTCCTGGCTGGCTTCGAAGGTTTTGCCCGAGGGCGACAATTCAATGACGTGGCGGCTTTGCATGAGCACCTCgggg   >  7:238123/1‑149 (MQ=255)                                                                                                                                             cGAGCCGCAGGCGCC‑GCGGCGGCAGGAAAAGGGTACCGGCAGGCCGCTGGCGAGCATGGCATCGAGCAGCAGCTCCTGGCTGGCTTCGAAGGTTTTGCCCGAGGGCGACAATTCAATGACGTGGCGGCTTTGCATGAGCACCTCGGGGc  <  2:340616/149‑1 (MQ=255)                                                                                                                                              ccGCCGC‑GGCGCCTGCGGCGGCAGGAAAAGGGTACCGGCAGGCCGCTGGCGAGCATGGCATCGAGCAGCAGCTCCTGGCTGGCTTCGAAGGTTTTGCCCGAGGGCGACAATTCAATGACGTGGCGGCTTTGCATGAGCACCTCGGGGc  <  8:114668‑M1/146‑1 (MQ=255)                                                                                                                                                |                                                                                                                                                   GTATTTCCAGGCGCATGTCGCTGCAGGCGTGGCTCTGGCACAGCAACATCTCGTCGGCGGCCAAGGGATAGGACGGCGGCGGTGTGTCCGCATCCCGCTGCTTGTCCTGATGCTGCCCTGAGACCACCTTGACC‑TTGCACGAGCCGCAGGCGCC‑GCGGCGGCAGGAAAAGGGTACCGGCAGGCCGCTGGCGAGCATGGCATCGAGCAGCAGCTCCTGGCTGGCTTCGAAGGTTTTGCCCGAGGGCGACAATTCAATGACGTGGCGGCTTTGCATGAGCACCTCGGGGC  >  NC_002947/3026284‑3026571

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.