| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3035075 = | 31 (0.590) | 4 (0.080) | 4/246 | NT | 10.3% | coding (114/1227 nt) | PP_2647 | MFS transporter |
| ? | NC_002947 | 3035106 = | 40 (0.780) | coding (83/1227 nt) | PP_2647 | MFS transporter | |||||
CTGCTACAGGCGAGATCCCTCATGGAACCTAACCCATGCCAAGCAACAGCCAGGCCCCTCGCGGCCTTCCCGAACACAGCCAACAAAGCGTGACCCAGCAATGGCTGGCAATCCTCTCGGTGGCCGTGGGCGCTTTCGCCCTGGTCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3035223‑3035075‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccGAGAGGATTGCCAGCCATTGCTGGGTCACGCTTTGTTGGCTGTGTTCGGGAAGGCCGCGAGGGGCCTGGCTGTTGCTTGGCATGGGTTAGGTTCCATGAGGGATCTCGCCTGTAGCAGGCGCAGGAGCGGGGGGATTTGCAGGGGATT > NC_002947/3035106‑3035253 CTGCTACAGGCGAGATCCCTCATGGAACCTAACCCATGCCAAGCAACAGCCAGGCCCCTCGCGGCCTTCCCGAACACAGCCAACAAAGCGTGACCCAGCAATGGCTGGTAATCCTCTCGGTGGCCGTGGGCGCTTTCGCCCTGGTCAC > 3:307608/1‑148 TGGCAATCCTCTCGGTGGCCGTGGGCGCTTTCGCCCTGGTCACCGAGAGGATTGCCAGCCATTGCTGGGTCACGCTTTGTTGGCTGTGTTCGGGAAGGCCGCGAGGGGCCTGGCTGTTGCTTGGCATGGGTTAGGTTCCATGAGGGATC > 6:281126/1‑149 CTCTCGGTGGCCGTGGGCGCTTTCGCCCTGGTCACCGAGAGGATTGCCAGCCATTGCTGGGTCACGCTTTGTTGGCTGTGTTCGGGAAGGCCGCGAGGGGCCTGGCTGTTGCTTGGCATGGGTTAGGTTCCATGAGGGATCTCGCCTG < 5:281126/148‑1 GTGGCCGTGGGCGCTTTCGCCCTGGTCACCGAGAGGATTGCCAGCCATTGCTGGGTCACGCTTTGTTGGCTGTGTTCGGGAAGGCCGCGAGGGGCCTGGCTGT > 7:173825/1‑103 GTGGCCGTGGGCGCTTTCGCCCTGGTCACCGAGAGGATTGCCAGCCATTGCTGGGTCACGCTTTGTTGGCTGTGTTCGGGAAGGCCGCGAGGGGCCTGGCTGT < 8:173825/103‑1 CGAGAGGATTGCCAGCCATTGCTGGGTCACGCTTTGTTGGCTGTGTTCGGGAAGGCCGCGAGGGGCCTGGCTGTTGCTTGGCATGGGTTAGGTTCCATGAGGGATCTCGCCTGTAGCAGGCGCAGGAGCGGGGGGATTTGCAGGGGATT > 6:346638/1‑149 CTGCTACAGGCGAGATCCCTCATGGAACCTAACCCATGCCAAGCAACAGCCAGGCCCCTCGCGGCCTTCCCGAACACAGCCAACAAAGCGTGACCCAGCAATGGCTGGCAATCCTCTCGGTGGCCGTGGGCGCTTTCGCCCTGGTCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3035223‑3035075‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccGAGAGGATTGCCAGCCATTGCTGGGTCACGCTTTGTTGGCTGTGTTCGGGAAGGCCGCGAGGGGCCTGGCTGTTGCTTGGCATGGGTTAGGTTCCATGAGGGATCTCGCCTGTAGCAGGCGCAGGAGCGGGGGGATTTGCAGGGGATT > NC_002947/3035106‑3035253 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |