New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3115542 =	36 (0.680)	4 (0.080)	4/238	NT	9.8%	coding (280/1527 nt)	PP_2732	hypothetical protein
	?	NC_002947	3115585 =	40 (0.810)					coding (323/1527 nt)	PP_2732	hypothetical protein

AGCTGGCGACGTTCTGTGGCCCAGCGCCCGAAGGCTTCACGGGAGCACAGAAAACGCGTGTCGCGAAACCACACAAGCGGCAGTGCGGCATCACGCAAGGCCTGCTCCAGGCGCCACTCACCGCACTCGGTCAAGTGAATGTGGGTGGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3115693‑3115542 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggcgccTGGAGCAGGCCTTGCGTGATGCCGCACTGCCGCTTGTGTGGTTTCGCGACACGCGTTTTCTGTGCTCCCGTGAAGCCTTCGGGCGCTGGGCCACAGAACGTCGCCAGCTGCGTATGG  >  NC_002947/3115585‑3115701                                                                                                                                                                                                                                                                               AGCTGGCGACGTTCTGTGGCCCAGCGCCCGAAGGCTTCACGGGAGCACAGAAAACGCGTGTCGCGAAACCACACAAGCGGCAGTGCGGCATCACGCAAGGCCTGCTCCAGGCGCCACTCACCGCACTCGGTCAAGTGAATGTGGGTGGC                                                                                                                          >  7:144287/1‑149                                                                                                               GCGCCACTCACCGCACTCGGTCAAGTGAATGTGGGTGGCGCCTGGAGCAGGCCTTGCGTGATGCCGCACTGCCGCTTGTGTGGTTTCGCGACACGCGTTTTCTGTGCTCCCGTGAAGCCTTCGGGCGCTGGGCCACAGAACGTCGCCAG            >  1:124267/1‑149                                                                                                                 GCCACTCACCGCACTCGGTCAAGTGAATGTGGGTGGCGCCTGGAGCAGGCCTTGCGTGATGCCGCACTGCCGCTTGTGTGGTTTCTCGACACGCGTTTTCTGTGCTCCCGTGAAGCCTTCGGGCGCTGG                              >  2:233663/1‑129                                                                                                                 GCCACTCACCGCACTCGGTCAAGTGAATGTGGGTGGCGCCTGGAGCAGGCCTTGCGTGATGCCGCACTGCCGCTTGTGTGGTTTCGCGACACGCGTTTTCTGTGCTCCCGTGAAGCCTTCGGGCGCTGG                              <  1:233663/129‑1                                                                                                                         CCGCACTCGGTCAAGTGAATGTGGGTGGCGCCTGGAGCAGGCCTTGCGTGATGCCGCACTGCCGCTTGTGTGGTTTCGCGACACGCGTTTTCTGTGCTCCCGTGAAGCCTTCGGGCGCTGGGCCACAGAACGTCGCCAGCTGCGTATGG  <  2:124267/149‑1                                                                                                                                                                                                                                                                               AGCTGGCGACGTTCTGTGGCCCAGCGCCCGAAGGCTTCACGGGAGCACAGAAAACGCGTGTCGCGAAACCACACAAGCGGCAGTGCGGCATCACGCAAGGCCTGCTCCAGGCGCCACTCACCGCACTCGGTCAAGTGAATGTGGGTGGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3115693‑3115542 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggcgccTGGAGCAGGCCTTGCGTGATGCCGCACTGCCGCTTGTGTGGTTTCGCGACACGCGTTTTCTGTGCTCCCGTGAAGCCTTCGGGCGCTGGGCCACAGAACGTCGCCAGCTGCGTATGG  >  NC_002947/3115585‑3115701

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.