New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3115542 =	36 (0.680)	4 (0.080)	4/238	NT	9.8%	coding (280/1527 nt)	PP_2732	hypothetical protein
	?	NC_002947	3115585 =	40 (0.810)					coding (323/1527 nt)	PP_2732	hypothetical protein

GCTGAAGATCGTTCTCATCTTCAGCGCCATGCGGCATTTTGCCCAGGCCCTGCGTGAACGGGGTTGGCAGGTGCACTATGTCGAACTGGACGCCGAGGGTAACAGCGGCAGCATCGTGGGTGAGTTGCATCGATGGCAACAAGCCTTGGGCGCCACCCACATTCACTTGACCGAGTGCGGTGAGTGGCGCCTGGAGCAGGCCTTGCGTGATGCCGCACTGCCGCTTGTGTGGTTTCGCGACACGCGTTTTCTGTGCTCCCGTGAAGCCTTCGGGCGCTGGGCCA  >  NC_002947/3115394‑3115677                                                                                                                                                     |                                                                                                                                        gCTGAAGATCGTTCTCATCTTCAGCGCCATGCGGCATTTTGCCCAGGCCCTGCGTGAACGGGGTTGGCAGGTGCACTATGTCGAACTGGACGCCGAGGGTAACAGCGGCAGCATCGTGGGTGAGTTGCATCGATGGCAACAAGCCTTgg                                                                                                                                         <  7:136816/149‑1 (MQ=255)           gTTCTCATCTTCAGCGCCATGCGGCATTTTGCCCAGGCCCTGCGTGAACGGGGTTGGCAGGTGCACTATGTCGAACTGGACGCCGAGGGTAACAGCGGCAGCATCGTGGGTGAGTTGCATCGATGGCAACAAGCCTTGGGCGccaccc                                                                                                                                <  6:47349/148‑1 (MQ=255)                       aGCGCCATGCGGCATTTTGCCCAGGCCCTGCGTGAACGGGGTTGGCAGGTGCACTATGTCGAACTGGACGCCGAGGGTAACAGCGGCAGCATCGTGGGTGAGTTGCATCGATGGCAACAAGCCTTGGGCGCCACCCACATTCAc                                                                                                                        >  4:252347/1‑144 (MQ=255)                       aGCGCCATGCGGCATTTTGCCCAGGCCCTGCGTGAACGGGGTTGGCAGGTGCACTATGTCGAACTGGACGCCGAGGGTAACAGCGGCAGCATCGTGGGTGAGTTGCATCGATGGCAACAAGCCTTGGGCGCCACCCACATTCAc                                                                                                                        <  3:252347/144‑1 (MQ=255)                          gcCATGCGGCATTTTGCCCAGGCCCTGCGTGAACGGGGTTGGCAGGTGCACTATGTCGAACTGGACGCCGAGGGTAACAGCGGCAGCATCGTGGGTGAGTTGCATCGATGGCAACAAGCCTTGGGCGCCACCCACATTCACTTGACCGa                                                                                                                <  4:218873/149‑1 (MQ=255)                                ccatacgcagctggcgacgttctgtggcccagcgcccgaaggcttcacgggagcacagaaaacgcgtgtcgcgaaaccacacaagcggcagtgcggcatcacgcaaggcctgctccaGGCGCCACCCACATTCACTTGACCGAGTGCgg                                                                                                          <  2:124267‑M1/32‑1 (MQ=255)                                cGGCATTTTGCCCAGGCCCTGCGTGAACGGGGTTGGCAGGTGCACTATGTCGAACTGGACGCCGAGGGTAACAGCGGCAGCATCGTGGGTGAGTTGCATCGATGGCAACAAGCCTTGGGCGCCACCCACATTCACTTGACCGAGTGCgg                                                                                                          >  2:244021/1‑149 (MQ=255)                                          ctggcgacgttctgtggcccagcgcccgaaggcttcacgggagcacagaaaacgcgtgtcgcgaaaccacacaagcggcagtgcggcatcacgcaaggcctgctccaGGCGCCACCCACATTCACTTGACCGAGTGCGGTGAGTGgcgc                                                                                                >  1:124267‑M1/108‑149 (MQ=255)                                          cccAGGCCCTGCGTGAACGGGGTTGGCAGGTGCACTATGTCGAACTGGACGCCGAGGGTAACAGCGGCGGCATCGTGGGTGAGTTGCATCGATGGCAACAAGCCTTGGGCGCCACCCACATTCACTTGACCGAGTGCGGTGAGTGgcgc                                                                                                >  4:251473/1‑149 (MQ=255)                                            ctggCCCTGCGTGAACGGGGTTGGCAGGTGCACTATGTCGAACTGGACGCCGAGGGTAACAGCGGCAGCATCGTGGGTGAGTTGCATCGAGGGCAACAAGCCTTGTGCGCCACCCACATTCTCTTGACCGAGTGCGGTGAGTGGCGCCt                                                                                              <  1:244021/147‑1 (MQ=255)                                            cAGGCCCTGCGTGAAGGGGGTTGGCAGGTGCACTATGTCGAACTGGACGCCGAGGGTAACAGCGGCAGGATCGTGGGTGAGTTGCATCGATGGCAACAAGCCTTGGGCGCCACCCACATTCACTTGACCGAGTGCGGTGAGTGGCGCCt                                                                                              <  2:115105/149‑1 (MQ=255)                                                 ccTGCGTGAACGGGGTTGGCAGGTGCACTATGTCGAACTGGACGCCGAGGGTAACAGCGGCAGCATCGTGGGTGAGTTGCATCGATGGCAACAAGCCTTGGGCGCCACCCACATTCACTTGACCGAGTGCGGTGAGTGGCGCCTg                                                                                             <  3:261177/145‑1 (MQ=255)                                                 ccTGCGTGAACGGGGTTGGCAGGTGCACTATGTCGAACTGGACGCCGAGGGTAACAGCGGCAGCATCGTGGGTGAGTTGCATCGATGGCAACAAGCCTTGGGCGCCACCCACATTCACTTGACCGAGTGCGGTGAGTGGCGCCTg                                                                                             >  4:261177/1‑145 (MQ=255)                                                            ggggTTGGCAGGTGCACTATGTCGAACTGGACGCCGAGGGTAACAGCGGCAGCATCGTGGGTGAGTTGCATCGATGGCAACAAGCCTTGGGCGCCACCCACATTCACTTGACCGAGTGCGGTGAGTGGCGCCTGGAGCAGGCCTTGCGt                                                                              >  8:162921/1‑149 (MQ=255)                                                            ccagcgcccgaaggcttcacgggagcacagaaaacgcgtgtcgcgaaaccacacaagcggcagtgcggcatcacgcaaggcctgctccaGGCGCCACCCACATTCACTTGACCGAGTGCGGTGAGTGgc                                                                                                  <  1:233663‑M1/40‑1 (MQ=255)                                                            ccagcgcccgaaggcttcacgggagcacagaaaacgcgtgtcgagaaaccacacaagcggcagtgcggcatcacgcaaggcctgctccaGGCGCCACCCACATTCACTTGACCGAGTGCGGTGAGTGgc                                                                                                  >  2:233663‑M1/90‑129 (MQ=255)                                                                       gTGCACTATGTCGAACTGGACGCCGAGGGTAACAGCGGCGGCATCGTGGGTGAGTTGCATCGATGGCAACAAGCCTTGGGCGCCACCCACATTCACTTGACCGAGTGCGGTGAGTGGCGCCTGGAGCAGGCCTTGCGTGATGCCGCACt                                                                   <  3:251473/149‑1 (MQ=255)                                                                       gTGCACTATGTCGAACTGGACGCCGAGGGTAACAGCGGCAGCATCGTGGGTGAGTTGCATCGATGGCAACAAGCCTTGGGCGCCACCCACATTCACTTGACCGAGTGCGGTGAGTGGCGCCTGGAGCAGGCCTTGCGTGATGCCGCACt                                                                   <  7:162921/149‑1 (MQ=255)                                                                          cACTATGTCGAACTGGACGCCGAGGGTACCAGCGGCAGCATCGTGGGTGAGTTGCATCGATGGCAACAAGCCTTGGGCGCCACCCACATTCACTTGACCGAGTGCGGTGAGTGGCGCCTGGAGCAGGCCTTGCGTGATGCCGCACTGcc                                                                <  6:238291/149‑1 (MQ=255)                                                                             tATGTCGAACTGGACGCCGAGGGTAACAGCGGCAGCATCGTGGGTGAGTTGCATCGATGGCAACAAGCCTTGGGCGCCACCCACATTCACTTGACCGAGTGCGGTGAGTGGCGCCTGGAGCAGGCCTTGCGTGATGCCGCACTGCCGCt                                                             >  1:103450/1‑149 (MQ=255)                                                                               tGTCGAACTGGACGCCGAGGGTAACAGCGGCAGCATCGTGGGTGAGTTGCATCGATGGCAACAAGCCTTGGGCGCCACCCACATTCACTTGACCGAGTGCGGTGAGTGGCGCCTGGAGCAGGcc                                                                                    >  5:257680/1‑124 (MQ=255)                                                                               tGTCGAACTGGACGCCGAGGGTAACAGCGGCAGCATCGTGGGTGAGTTGCATCGATGGCAACAAGCCTTGGGCGCCACCCACATTCACTTGACCGAGTGCGGTGAGTGGCGCCTGGAGCAGGcc                                                                                    <  6:257680/124‑1 (MQ=255)                                                                                   gAACTGGACGCCGAGGGTAACAGCGGCAGCATCGTGGGTGAGTTGCATCGATGGCAACAAGCCTTGGGCGCCACCCACATTCACTTGACCGAGTGCGGTGAGTGGCGCCTGGAGCAGGCCTTGCGTGATGCCGCACTGCCGCTtgtgtg                                                       >  6:240535/1‑149 (MQ=255)                                                                                    aaCTGGACGCCGAGGGTAACAGCGGCAGCATCGTGGGTGAGTTGCATCGATGGCAACAAGCCTTGGGCGCCACCCACATTCACTTGACCGAGTGCGGTGAGTGGCGCCTGGAGCAGGCCTTGCGTGATGCCGCACTGCCGCTTGTGTgg                                                      <  2:98965/149‑1 (MQ=255)                                                                                         gACGCCGAGGGTAACAGCGGCAGCATCGTGGGTGAGTTGCATCGATGGCAACAAGCCTTGGGCGCCACCCACATTCACTTGACCGAGTGCGGTGAGTGGCGCCTGGAGCAGGCCTTGCGTGATGCCGCACTGCCGCTTGTGTGGTTTcg                                                 >  8:298731/1‑149 (MQ=255)                                                                                               gAGGGTAACAGCGGCAGCATCGTGGGTGAGTTGCATCGATGGCAACAAGCCTTGGGCGCCACCCACATTCACTTGACCGAGTGCGGTGAGTGGCGCCTGGAGCAGGCCTTGCGTGATGCCGCACTGCCGCTTGTGTGGTTTCGCGacac                                           >  7:234937/1‑149 (MQ=255)                                                                                                    tAACAGCGGCAGCATCGTGGGTGAGTTGCATCGATGGCAACAAGCCTTGGGCGCCACCCACATTCACTTGACCGAGTGCGGTGAGTGGCGCCTGGAGCAGGCCTTGCGTGATGCCGCACTGCCGCTTGTGTGGTTTCGCGACACGCGtt                                      <  8:234937/149‑1 (MQ=255)                                                                                                                 aTCGTGGGTGAGTTGCATCGATGGCAACAAGCCTTGGGCGCCACCCACATTCACTTGACCGAGTGCGGTGAGTGGCGCCTGGAGCAGGCCTTGCGTGATGCCGCACTGCCGCtt                                                            <  1:51036/114‑1 (MQ=255)                                                                                                                 aTCGTGGGTGAGTTGCATCGATGGCAACAAGCCTTGGGCGCCACCCACATTCACTTGACCGAGTGCGGTGAGTGGCGCCTGGAGCAGGCCTTGCGTGATGCCGCACTGCCGCtt                                                            >  2:51036/1‑114 (MQ=255)                                                                                                                 aTCGTGGGTGAGTTGCATCGATGGCAACAAGCCTTGGGCGCCACCCACATTCACTTGACCGAGTGCGGTGAGTGGCGCCTGGAGCAGGCCTTGCGTGATGCCGCACTGCCGCTTGTGTGGTTTCGCGACACGCGTTTTCTGTGCTCCCg                         <  5:240535/149‑1 (MQ=255)                                                                                                                               gCATCGATGGCAACAAGCCTTGGGCGCCACCCACATTCACTTGACCGAGTGCGGTGAGTGGCGCCTGGAGCAGGCCTTGCGTGATGCCGCACTGCCGCTTGTGTGGTTTCGCGACACGCGTTTTCTGTGCTCCCGTGAAGCCTTCGGgc           >  4:342529/1‑149 (MQ=255)                                                                                                                                cATCGATGGCAACAAGCCTTGGGCGCCACCCACATTCACTTGACCGAGTGCGGTGAGTGGCGCCTGGAGCAGGCCTTGCGTGATGCCGCACTGCCGCTTGTGTGGTTTCGCGACACGCGTTTTCTGTGCTCCCGTGAAGCCTTCGGgcg          >  7:312859/1‑149 (MQ=255)                                                                                                                                    gATGGCAACAAGCCTTGGGCGCCACCCACATTCACTTGACCGAGTGCGGTGAGTGGCGCCTGGAGCAGGCCTTGCGTGATGCCGCACTGCCGCTTGTGTGGTTTCGCGACACGCGTTTTCTGTGCTCCCGTGAAGCCTTCGGGCGCTgg      <  8:312859/149‑1 (MQ=255)                                                                                                                                     aTGGCAACAAGCCTTGGGCGCCACCCACATTCACTTGACCGAGTGCGGTGAGTGGCGCCTGGAGCAGGCCTTGCGTGATGCCGCACTGCCGCTtgtgt                                                        >  4:319394/1‑98 (MQ=255)                                                                                                                                     aTGGCAACAAGCCTTGGGCGCCACCCACATTCACTTGACCGAGTGCGGTGAGTGGCGCCTGGAGCAGGCCTTGCGTGATGCCGCACTGCCGCTtgtgt                                                        <  3:319394/98‑1 (MQ=255)                                                                                                                                     aTGGCAACAAGCCTTGGGCGCCACCCACATTCACTTGACCGAGTGCGGTGAGTGGCGCCTGGAGCAGGCCTTGCGTGATGCCGCACTGCCGCTTGTGTGGTTTCGCGACACGCGTTTTCTGTGCTCCCGTGAAGCCTTCggg            >  8:210278/1‑142 (MQ=255)                                                                                                                                     aTGGCAACAAGCCTTGGGCGCCACCCACATTCACTTGACCGAGTGCGGTGAGTGGCGCCTGGAGCAGGCCTTGCGTGATGCCGCACTGCCGCTTGTGTGGTGTCGCGACCCGCGTTTTCTGTGCTCCCGTGAAGCCTTCggg            <  7:210278/142‑1 (MQ=255)                                                                                                                                      tGGCAACAAGCCTTGGGCGCCACCCACATTCACTTGACCGAGTGCGGTGAGTGGCGCCTGGAGCAGGCCTTGCGTGATGCCGCACTGCCGCTTGTGTGGTTTCGCGACACGCGTTTTCTGTGCTCCCGTGAAGCCTTCGGGCGCTGGGc    <  7:298731/149‑1 (MQ=255)                                                                                                                                          aacaaGCCTTGGGCGCCACCCACATTCACTTGACCGAGTGCGGTGAGTGGCGCCTGGAGCAGGCCTTGCg                                                                               >  4:49944/1‑70 (MQ=255)                                                                                                                                          aacaaGCCTTGGGCGCCACCCACATTCACTTGACCGAGTGCGGTGAGTGGCGCCTGGAGCAGGCCTTGCg                                                                               <  3:49944/70‑1 (MQ=255)                                                                                                                                          aacaaGCCTTGGGCGCCACCCACATTCACTTGACCGAGTGCGGTGAGTGGCGCCTGGAGCAGGCCTTGCGTGATGCCGCACTGCCGCTTGTGTGGTTTCGCGACACGCGTTTTCTGTGCTCCCGTGAAGCCTTCGGGCGCTGGGCca  >  8:144287/1‑147 (MQ=255)                                                                                                                                                     |                                                                                                                                        GCTGAAGATCGTTCTCATCTTCAGCGCCATGCGGCATTTTGCCCAGGCCCTGCGTGAACGGGGTTGGCAGGTGCACTATGTCGAACTGGACGCCGAGGGTAACAGCGGCAGCATCGTGGGTGAGTTGCATCGATGGCAACAAGCCTTGGGCGCCACCCACATTCACTTGACCGAGTGCGGTGAGTGGCGCCTGGAGCAGGCCTTGCGTGATGCCGCACTGCCGCTTGTGTGGTTTCGCGACACGCGTTTTCTGTGCTCCCGTGAAGCCTTCGGGCGCTGGGCCA  >  NC_002947/3115394‑3115677

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.