| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3126578 = | 38 (0.720) | 3 (0.060) | 3/238 | NT | 8.0% | coding (847/960 nt) | PP_2744 | ribose‑phosphate pyrophosphokinase family protein |
| ? | NC_002947 | 3126653 = | 33 (0.670) | coding (772/960 nt) | PP_2744 | ribose‑phosphate pyrophosphokinase family protein | |||||
CTGATCAGCACGGGGCAGACGCTGCTACGCGCTGCCCAGGCCTGCCGGCAGGCCGGAGCCAGCCGCATGCTGGCCGCGGCCACCCACGGCCTGTTCACCACCGGTGGCGAGCTGTTCGACAGCGGCGCGTTCGAACGGGTACTGGTGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3126728‑3126578‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtggccgCGGCCAGCATGCGGCTGGCTCCGGCCTGCCGGCAGGCCTGGGCAGCGCGTAGCAGCGTCTGCCCCGTGCTGATCAGGTCGTCGAATACGATGACGGTGCTGCCTGCCACGTTACCGACCAGGTGTTCGCCGCTCAGGCCTGCC > NC_002947/3126653‑3126795 CTGATCAGCACGGGGCAGACGCTGCTACGCGCTGCCCAGGCCTGCCGGCAGGCCGGAGCCAGCCGCATGCTGGCCGCGGCCACCCACGGCCTGTTCACCACCGGTGGCGAGCTGTTCGACAGCGGCGCGTTCGAACGGGTACTGGTGGC > 3:121988/1‑149 GCCTGCCGGCAGGCCGGAGCCAGCCGCATGCTGGCCGCGGCCACCCACGGCCTGTTCACCACCGGTGGCGAGCTGTTCGACAGCGGCGCGTTCGAACGGGTACTGGT > 5:327016/1‑107 GCCTGCCGGCAGGCCGGAGCCAGCCGCATGCTGGCCGCGGCCACCCACGGCCTGTTCACCACCGGTGGCGAGCTGTTCGACAGCGGCGCGTTCGAACGGGTACTGGT < 6:327016/107‑1 GCGGCCACCCACGGCCTGTTCACCACCGGTGGCGAGCTGTTCGACAGCGGCGCGTTCGAACGGGTACTGGTGGCCGCGGCCAGCATGCGGCTGGCTCCGGCCTGCCGGCAGGCCTGGGCAGCGCGTAGCAGCGTCTG < 8:157792/137‑1 GGCCACCCACGGCCTGTTCACCACCGGTGGCGAGCTGTTCGACAGCGGCGCGTTCGAACGGGTACTGGTGGCCGCGGCCAGCATGCGGCTGGCTCCGGCCTGCCGGCAGGCCTGGGCAGCG < 3:98482/121‑1 GGCCACCCACGGCCTGTTCACCACCGGTGGCGAGCTGTTCGACAGCGGCGCGTTCGAACGGGTACTGGTGGCCGCGGCCAGCATGCGGCTGGCTCCGGCCTGCCGGCAGGCCTGGGCAGCG > 4:98482/1‑121 TGGCCGCGGCCAGCATGCGGCTGGCTCCGGCCTGCCGGCAGGCCTGGGCAGCGCGTAGCAGCGTCTGCCCCGTGCTGATCAGGTCGTCGAATACGATGACGGTGCTGCCTGCCACGTTACCGACCAGGTGTTCGCCGCTCAGGCCTGCC > 5:53983/1‑149 CTGATCAGCACGGGGCAGACGCTGCTACGCGCTGCCCAGGCCTGCCGGCAGGCCGGAGCCAGCCGCATGCTGGCCGCGGCCACCCACGGCCTGTTCACCACCGGTGGCGAGCTGTTCGACAGCGGCGCGTTCGAACGGGTACTGGTGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3126728‑3126578‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtggccgCGGCCAGCATGCGGCTGGCTCCGGCCTGCCGGCAGGCCTGGGCAGCGCGTAGCAGCGTCTGCCCCGTGCTGATCAGGTCGTCGAATACGATGACGGTGCTGCCTGCCACGTTACCGACCAGGTGTTCGCCGCTCAGGCCTGCC > NC_002947/3126653‑3126795 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |