| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3371988 = | 51 (0.970) | 3 (0.060) | 3/246 | NT | 5.9% | coding (85/288 nt) | csoR | copper utilization transcriptional regulator |
| ? | NC_002947 | 3372008 = | 47 (0.920) | coding (65/288 nt) | csoR | copper utilization transcriptional regulator | |||||
GTTTGACCATATCCCCCCCAGGGGGATAGGATGCGAGCGTAATTCATCGATGCATGAGACTCAAGGCATGAGCGATCACGAACACGGCCATCAGCACCAAAGTCATAGCGATATCATCAAAAGGTTGAAGCGTGCGGAGGGCCACCTGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3372139‑3371988‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcaCGCTTCAACCTTTTGATGATATCGCTATGACTTTGGTGCTGATGGCCGTGTTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTT > NC_002947/3372008‑3372151 GTTTGACCATATCCCCCCCAGGGGGATAGGATGCGAGCGTAATTCATCGATGCATGAGACTCAAGGCATGAGCGATCACGAACACGGCCATCAGCACCAAAGTCATAGCGATATCATCAAAAGGTTGAAGCGTGCGGAGGGCCACCTGC > 1:176538/1‑149 TTTGACCATATCCCCCCCAGGGGGATAGGATGCGAGCGTAATTCATCGATGCATGAGACTCAAGGCATGAGCGATCACGAACACGGCCATCAGCACCAAAGTCATAGCGATATCATCAAAAGGTTGAAGCGTGCGGAGGGCCACCTGCG < 4:288763/149‑1 GACCATATCCCCCCCAGGGGGATAGGATGCGAGCGTAATTCATCGATGCATGAGACTCAAGGCATGAGCGATCACGAACACGGCCATCAGCACCAAAGTCATAGCGATATCATCAAAAGGTTGAAGCGTGCGGAGGGCCACCTGCGCA < 4:302373/148‑1 GGGGATAGGATGCGAGCGTAATTCATCGATGCATGAGACTCAAGGCATGAGCGATCACGAACACGGCCATCAGCACCAAAGTCATAGCGATATCATCAAAAGGTTGAAGCGTGCGCAGGTGGCCCTCCGCACGCTTCAACCTTTTGATG < 2:12433/149‑1 TCAAGGCATGAGCGATCACGAACACGGCCATCAGCACCAAAGTCATAGCGATATCATCAAAAGGTTGAAGCGTGCGCAGGTGGCCCTCCGCACGCTTCAACCTTT < 5:115741/105‑1 TCAAGGCATGAGCGATCACGAACACGGCCATCAGCACCAAAGTCATAGCGATATCATCAAAAGGTTGAAGCGTGCGCAGGTGGCCCTCCGCACGCTTCAACCTTT > 6:115741/1‑105 CGCACGCTTCAACCTTTTGATGATATCGCTATGACTTTGGTGCTGATGGCCGTGTTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTT < 6:143486/148‑1 GTTTGACCATATCCCCCCCAGGGGGATAGGATGCGAGCGTAATTCATCGATGCATGAGACTCAAGGCATGAGCGATCACGAACACGGCCATCAGCACCAAAGTCATAGCGATATCATCAAAAGGTTGAAGCGTGCGGAGGGCCACCTGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3372139‑3371988‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcaCGCTTCAACCTTTTGATGATATCGCTATGACTTTGGTGCTGATGGCCGTGTTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTT > NC_002947/3372008‑3372151 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |