| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3495957 = | 44 (0.830) | 3 (0.060) | 3/242 | NT | 6.7% | coding (257/1503 nt) | puuD | uricase/urate oxidase |
| ? | NC_002947 | 3496003 = | 41 (0.810) | coding (211/1503 nt) | puuD | uricase/urate oxidase | |||||
GCCCGCTCCGACACCGAGCGCAACCGCACCCGCGACCTGATTGGCGAACTGGTGAACCAGGTGCTCGAGGGTGAGATGACCCCGAGCAAGGACCTGATCGCCGTGCTCGATTCGCGCATCGCCGAGATCGACGCGATGCTCTCCGAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3496105‑3495957‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgagcaCGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAGCACCTGGTTCACCAGTTCGCCAATCAGGTCGCGGGTGCGGTTGCGCTCGGTGTCGGAGCGGGCCACGCGGCTTTGCGAAATGATGCTGTCGAGCAGCGAGGGCTG > NC_002947/3496003‑3496147 GCCCGCTCCGACACCGAGCGCAACCGCACCCGCGACCTGATTGGCGAACTGGTGAACCAGGTGCTCGAGGGTGAGATGACCCCGAGCAAGGACCTGATCGCCGTGCTCGATTCGCGCATCGCCGAGATCGACGCGATGCTCTCCGAGCA < 3:66418/149‑1 GCCGTGCTCGATTCGCGCATCGCCGAGATCGACGCGATGCTCTCCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAGCACCTGGTTCACCAGTTCGCCAATCAGGTCGCGGGTGCGGTTGCGCTCGGTGTCGGAGC > 2:130136/1‑149 GCTCGATTCGCGCATCGCCGAGATCGACGCGATGCTCTCCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAGCACCTGGTTCACCAGTTCGCCAATCA > 7:228884/1‑111 GCTCGATTCGCGCATCGCCGAGATCGACGCGATGCTCTCCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAGCACCTGGTTCACCAGTTCGCCAATCA < 8:228884/111‑1 AGCACGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAGCACCTGGTTCACCAGTTCGCCAATCAGGTCGCGGGTGCGGTTGCGCTCGGTGTCGGAGCGGGCCACGCGGCTTTGCGAAATGATGCTGTCGAGCAGCGAGGGCTG < 4:66418/149‑1 GCCCGCTCCGACACCGAGCGCAACCGCACCCGCGACCTGATTGGCGAACTGGTGAACCAGGTGCTCGAGGGTGAGATGACCCCGAGCAAGGACCTGATCGCCGTGCTCGATTCGCGCATCGCCGAGATCGACGCGATGCTCTCCGAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3496105‑3495957‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgagcaCGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAGCACCTGGTTCACCAGTTCGCCAATCAGGTCGCGGGTGCGGTTGCGCTCGGTGTCGGAGCGGGCCACGCGGCTTTGCGAAATGATGCTGTCGAGCAGCGAGGGCTG > NC_002947/3496003‑3496147 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |