New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3495957 =	44 (0.830)	3 (0.060)	3/242	NT	6.7%	coding (257/1503 nt)	puuD	uricase/urate oxidase
	?	NC_002947	3496003 =	41 (0.810)					coding (211/1503 nt)	puuD	uricase/urate oxidase

TCAGCGTGGTGCTGGTCTCGGTCTGGTCTACCTGGTATTTCAGGCCGCGCCAGGAGGCTTCCAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAGCACCTGGTTCACCAGTTCGCCAATCAGGTCGCGGGTGCGGTTGCGCTCGGTGTCGGAGCGGGCCACGCGGCTTTGCGAAATGATGCTGTCGAGCAGCGAGGGCTG  >  NC_002947/3495856‑3496147                                                                                                                                                    |                                                                                                                                                 tCAGCGTGGTGCTGGTCTCGGTCTGGTCTACCTGGTATTTCAGGCCGCGCCAGGAGGCTTCCAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACg                                                                                                                                                 >  3:139227/1‑149 (MQ=255)  cAGCGTGGTGCTGGTCTCGGTCTGGTCTACCTGGTATTTCAGGCCGCGCCAGGAGGCTTCCAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACg                                                                                                                                                 <  6:73914/148‑1 (MQ=255)   gctccgacaccgagcgcaaccgcacccgcgacctgattggcgaactggtgaaccaggtgctcgagggtgagatgaccccgagcaaggacctgatcgccgTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGc                                                                                                                                               >  2:130136‑M1/100‑149 (MQ=255)         gtgCTGGTCTCGGTCTGGTCTACCTGGTATTTCAGGCCGCGCCAGGAGGCTTCCAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAg                                                                                                                                         <  4:139227/149‑1 (MQ=255)          tgCTGGTCTCGGTCTGGTCTACCTGGTATTTCAGGCCGCGCCAGGAGGCTTCCAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAgg                                                                                                                                        >  3:103953/1‑149 (MQ=255)           gCTGGTCTCGGTCTGGTCTACCTGGTATTTCAGGCCGCGCCAGGAGGCTTCCAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGt                                                                                                                                       >  2:111403/1‑149 (MQ=255)               gTCTCGGTCTGGTCTACCTGGTATTTCAGGCCGCGCCAGGAGGCTTCCAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTCCt                                                                                                                                    <  5:117420/148‑1 (MQ=255)                          gtctACCTGGTATTTCAGGCCGCGCCAGGAGGCTTCCAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCa                                                                                                                        <  4:103953/149‑1 (MQ=255)                              aCCTGGTATTTCAGGCCGCGCCAGGAGGCTTCCAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACgg                                                                                                                                                <  4:231927/121‑1 (MQ=255)                              aCCTGGTATTTCAGGCCGCGCCAGGAGGCTTCCAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACgg                                                                                                                                                >  3:231927/1‑121 (MQ=255)                               ccTGGTATTTCAGGCCGCGCCAGGAGGCTTCCAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCAtct                                                                                                                     <  1:111403/147‑1 (MQ=255)                               ccTGGTATTTCAGGCCGCGCCAGGAGGCTTCCAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCATCTCa                                                                                                                   <  2:67827/149‑1 (MQ=255)                                 tGGTATTTCAGGCCGCGCCAGGAGGCTTCCAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCATCTCAcc                                                                                                                 >  4:71515/1‑149 (MQ=255)                                      tttCAGGCCGCGCCAGGAGGCTTCCAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTc                                                                                                              >  6:61962/1‑147 (MQ=255)                                        tCAGGCCGCGCCAGGAGGCTTCCAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAg                                                                                                           <  3:71515/148‑1 (MQ=255)                                          aGGCCGCGCCAGGAGGCTTCCAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTcc                                                                                                                                     <  6:7465/120‑1 (MQ=255)                                          aGGCCGCGCCAGGAGGCTTCCAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTcc                                                                                                                                     >  5:7465/1‑120 (MQ=255)                                            gCCGCGCCAGGAGGCTTCCAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAGCACCt                                                                                                      <  2:185236/149‑1 (MQ=255)                                              cgcgCCAGGAGGCTTCCAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAGCACCTgg                                                                                                    <  5:61962/149‑1 (MQ=255)                                              cgcgCCAGGAGGCTTCCAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAGCACCTgg                                                                                                    <  3:213978/149‑1 (MQ=255)                                              cgcgCCAGGAGGCTTCCAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAGCACCTgg                                                                                                    <  2:117008/149‑1 (MQ=255)                                                    aggaggCTTCCAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCAGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAGCACCTGGTTCAc                                                                                               >  5:15334/1‑148 (MQ=255)                                                         gCTTCCAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAGCACCTGGTTCACCAGTTc                                                                                         >  8:232346/1‑149 (MQ=255)                                                           ttCCAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAg                                                                                                           <  6:308910/129‑1 (MQ=255)                                                           ttCCAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTCCTTGCACGGGGTCATCTCACCCTCGAg                                                                                                           >  5:308910/1‑129 (MQ=255)                                                              cAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAGCACCTGGTTCACCAGTTCGCCa                                                                                     >  7:97362/1‑148 (MQ=255)                                                               aaCTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACCGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAGCACCTGGTTCACCAGTTCGCCaa                                                                                    >  2:155989/1‑148 (MQ=255)                                                                  tgctgAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAGCAc                                                                                                        <  1:95180/125‑1 (MQ=255)                                                                  tgctgAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAGCAc                                                                                                        >  2:95180/1‑125 (MQ=255)                                                                    ctgAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGAAGCGCGAATCGAGCACGGCGATCAGGTCCTTGATCGTGGTAATCTAACCCTCGAGCACCTGGTTCAACAGTTCGCCAATCAgg                                                                               >  4:46841/1‑148 (MQ=255)                                                                               gggCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAGCACCTGGTTCACCAGTTCGCCAATCAGGTCGCGGGTGCgg                                                                   >  2:229241/1‑149 (MQ=255)                                                                                 gCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAGCACCTGGTTCACCAGTTCGCCAATCAGGTCGCGGGTGCGGtt                                                                 <  1:155989/149‑1 (MQ=255)                                                                                 gCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAGCACCTGGTTCACCAGTTCGCCAATCAGGTCGCGGGTGCGGtt                                                                 <  1:229241/149‑1 (MQ=255)                                                                                   gTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAGCACCTGGTTCACCAGTTCGCCAATCAGGTCGCGGGTGCGGTTgc                                                               <  6:15334/149‑1 (MQ=255)                                                                                   gTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAGCACCTGGTTCACCAGTTCGCCAATCAGGTCGCGGGTGCGGTTgc                                                               <  7:232346/149‑1 (MQ=255)                                                                                     gCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAGCACCTGGTTCACCAGTTCGCCAATCAGGTCGCGGGTGCGGTTgcgc                                                             >  6:16888/1‑149 (MQ=255)                                                                                      cATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAGCACCTGGTTCACCAGTTCGCCAATCAGGTCGCGGGTGCGGTTGCGCt                                                            >  8:230155/1‑149 (MQ=255)                                                                                               gTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAGCACCTGGTTCACCAGTTCGCCAATCAGGTCGCGGGTGCGGTTGCGCTCGgtgt                                                      <  7:230155/146‑1 (MQ=255)                                                                                                  gccgtgctcgattcgcgcatcgccgagatcgacgcgatgctctccgagcaCGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAGCACCTGGTTCACCAGTTCGCCAATCAGGTCGCGGGTGCGGTTGCGCTCGGTGTCGGAGc                                                >  2:130136‑M2/51‑149 (MQ=255)                                                                                                    tCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCGCGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAGCACCTGGTTCACCAGTTCGCCAATCAGGTCGCGGGTGCGGTTGCGCTCGgt                                                        <  8:78461/139‑1 (MQ=255)                                                                                                    tCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCGCGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAGCACCTGGTTCACCAGTTCGCCAATCAGGTCGCGGGTGCGGTTGCGCTCGgt                                                        >  7:78461/1‑139 (MQ=255)                                                                                                      TGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAGCACCTGGTTCACCAGTTCGCCAATCAGGTCGCGGGTGCGGTTGCGCTCGGTGTCGGAGCGGGc                                            <  3:66418‑M1/149‑1 (MQ=255)                                                                                                       gctcgattcgcgcatcgccgagatcgacgcgatgctctccgagcaCGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAGCACCTGGTTCACCAGTTCGCCAATCa                                                                                 >  7:228884‑M2/46‑111 (MQ=255)                                                                                                       gctcgattcgcgcatcgccgagatcgacgcgatgctctccgagcaCGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAGCACCTGGTTCACCAGTTCGCCAATCa                                                                                 <  8:228884‑M2/66‑1 (MQ=255)                                                                                                             agagCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAGCACCTGGTTCACCAGTTCg                                                                                        >  4:203163/1‑98 (MQ=255)                                                                                                             agagCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAGCACCTGGTTCACCAGTTCg                                                                                        <  3:203163/98‑1 (MQ=255)                                                                                                                                ggCGATGCGCGAATCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAGCACCTGGTTCACCAGTTCGCCAATCAGGTCGCGGGTGCGGTTGCGCTCGGTGTCGGAGCGGGCCACGCGGCTTTGCGAAatgatg                      <  8:97362/145‑1 (MQ=255)                                                                                                                                ggCGATGCGCGAATCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAGCACCTGGTTCACCAGTTCGCCAATCAGGTCGCGGGTGCGGTTGCGCTCGGTGTCGGAGCGGGCCACGCGGCTTTGCGAAatga                        <  5:16888/143‑1 (MQ=255)                                                                                                                                        gcgAATCGAGCCCGGCGATCAGGTCCTTGCTCGGGGTCATCTCACACTCGAGCACCTGGTTCACCAGTTCGCCAATCAGGTCGCGGGTGCGGTTGCGCTCGGTGGAGGAGCGGGCCACGCGGATTTGCGAAATGATGCAGTCGagcagc          >  3:180303/1‑149 (MQ=255)                                                                                                                                        gcgAATCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAGCACCTGGTTCACCAGTTCGCCAATCAGGTCGCGGGTGCGGTTGCGCTCGGTGTCGGAGCGGGCCACGCGGCTTTGCGAAATGATGCTGTCGagcagc          >  7:332625/1‑149 (MQ=255)                                                                                                                                                agcaCGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAGCACCTGGTTCACCAGTTCGCCAATCAGGTCGCGGGTGCGGTTGCGCTCGGTGTCGGAGCGGGCCACGCGGCTTTGCGAAATGATGCTGTCGAGCAGCGAGGGCtg  <  4:66418‑M2/145‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                 TCAGCGTGGTGCTGGTCTCGGTCTGGTCTACCTGGTATTTCAGGCCGCGCCAGGAGGCTTCCAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAGCACCTGGTTCACCAGTTCGCCAATCAGGTCGCGGGTGCGGTTGCGCTCGGTGTCGGAGCGGGCCACGCGGCTTTGCGAAATGATGCTGTCGAGCAGCGAGGGCTG  >  NC_002947/3495856‑3496147

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.