New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3495957 =	44 (0.830)	3 (0.060)	3/242	NT	6.7%	coding (257/1503 nt)	puuD	uricase/urate oxidase
	?	NC_002947	3496003 =	41 (0.810)					coding (211/1503 nt)	puuD	uricase/urate oxidase

AGGTCGCGTACCAGGTCTTTCTTCGAGGCATTGAGCAGGTGGATCTTCAGCGTGGTGCTGGTCTCGGTCTGGTCTACCTGGTATTTCAGGCCGCGCCAGGAGGCTTCCAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAGCACCTGGTTCACCAGTTCGCCAATCAGGTCGCGGGTGCGGTTGCGCTCGGTGTCGGAGCGGGC  >  NC_002947/3495810‑3496105                                                                                                                                                    |                                                                                                                                                     aGGTCGCGTACCAGGTCTTTCTTCGAGGCATTGAGCAGGTGGATCTTCAGCGTGGTGCTGGTCTCGGTCTGGTCTACCTGGTATTTCAGGCCGCGCCAGGAGGCTTCCAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCt                                                                                                                                                      <  2:124265/148‑1 (MQ=255)   cagccctcgctgctcgacagcatcatttcgcaaagccgcgtggcccgctccgacaccgagcgcaaccgcacccgcgacctgattggcgaactggtgaaccaggtgctcgagggtgagatgaccccgagcaaggacctgatcgccgTGCt                                                                                                                                                   <  4:66418‑M1/4‑1 (MQ=255)                              aTTGAGCAGGTGGATCTTCAGCGTGGTGCTGGTCTCGGTCTGGTCTACCTGGTATTTCAGGCCGCGCCAGGAGGCTTCCAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGa                                                                                                                        >  6:117420/1‑149 (MQ=255)                                         ggATCTTCAGCGTGGTGCTGGTCTCGGTCTGGTCTACCTGGTATTTCAGGCCGCGCCAGGAGGCTTCCAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTc                                                                                                                                   >  1:143633/1‑127 (MQ=255)                                         ggATCTTCAGCGTGGTGCTGGTCTCGGTCTGGTCTACCTGGTATTTCAGGCCGCGCCAGGAGGCTTCCAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTc                                                                                                                                   <  2:143633/127‑1 (MQ=255)                                          gATCTTCAGCGTGGTGCTGGTCTCGGTCTGGTCTACCTGGTATTTCAGGCCGCGCCAGGAGGCTTCCAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATc                                                                                                              >  1:67827/1‑147 (MQ=255)                                          gATCTTCAGCGTGGTGCTGGTCTCGGTCTGGTCTACCTGGTATTTCAGGCCGCGCCAGGAGGCTTCCAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGa                                                                                                            <  5:98938/149‑1 (MQ=255)                                               tCAGCGTGGTGCTGGTCTCGGTCTGGTCTACCTGGTATTTCAGGCCGCGCCAGGAGGCTTCCAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACg                                                                                                       >  3:139227/1‑149 (MQ=255)                                                cAGCGTGGTGCTGGTCTCGGTCTGGTCTACCTGGTATTTCAGGCCGCGCCAGGAGGCTTCCAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACg                                                                                                       <  6:73914/148‑1 (MQ=255)                                                 gctccgacaccgagcgcaaccgcacccgcgacctgattggcgaactggtgaaccaggtgctcgagggtgagatgaccccgagcaaggacctgatcgccgTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGc                                                                                                     >  2:130136‑M1/100‑149 (MQ=255)                                                       gtgCTGGTCTCGGTCTGGTCTACCTGGTATTTCAGGCCGCGCCAGGAGGCTTCCAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAg                                                                                               <  4:139227/149‑1 (MQ=255)                                                        tgCTGGTCTCGGTCTGGTCTACCTGGTATTTCAGGCCGCGCCAGGAGGCTTCCAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAgg                                                                                              >  3:103953/1‑149 (MQ=255)                                                         gCTGGTCTCGGTCTGGTCTACCTGGTATTTCAGGCCGCGCCAGGAGGCTTCCAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGt                                                                                             >  2:111403/1‑149 (MQ=255)                                                             gTCTCGGTCTGGTCTACCTGGTATTTCAGGCCGCGCCAGGAGGCTTCCAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTCCt                                                                                          <  5:117420/148‑1 (MQ=255)                                                                        gtctACCTGGTATTTCAGGCCGCGCCAGGAGGCTTCCAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCTTCTCGGAGAGCATCGCGTc                                                                                                                                   >  1:69271/1‑96 (MQ=255)                                                                        gtctACCTGGTATTTCAGGCCGCGCCAGGAGGCTTCCAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCTTCTCGGAGAGCATCGCGTc                                                                                                                                   <  2:69271/96‑1 (MQ=255)                                                                        gtctACCTGGTATTTCAGGCCGCGCCAGGAGGCTTCCAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCa                                                                              <  4:103953/149‑1 (MQ=255)                                                                            aCCTGGTATTTCAGGCCGCGCCAGGAGGCTTCCAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACgg                                                                                                      <  4:231927/121‑1 (MQ=255)                                                                            aCCTGGTATTTCAGGCCGCGCCAGGAGGCTTCCAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACgg                                                                                                      >  3:231927/1‑121 (MQ=255)                                                                             ccTGGTATTTCAGGCCGCGCCAGGAGGCTTCCAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCAtct                                                                           <  1:111403/147‑1 (MQ=255)                                                                             ccTGGTATTTCAGGCCGCGCCAGGAGGCTTCCAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCATCTCa                                                                         <  2:67827/149‑1 (MQ=255)                                                                               tGGTATTTCAGGCCGCGCCAGGAGGCTTCCAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCATCTCAcc                                                                       >  4:71515/1‑149 (MQ=255)                                                                                  tgattggcgaactggtgaaccaggtgctcgagggtgagatgaccccgagcaaggacctgatcgccgTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGc                                                                                                          <  8:228884‑M1/45‑1 (MQ=255)                                                                                  tgattggcgaactggtgaaccaggtgctcgagggtgagatgaccccgagcaaggacctgatcgccgTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGc                                                                                                          >  7:228884‑M1/67‑111 (MQ=255)                                                                                    tttCAGGCCGCGCCAGGAGGCTTCCAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTc                                                                    >  6:61962/1‑147 (MQ=255)                                                                                      tCAGGCCGCGCCAGGAGGCTTCCAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAg                                                                 <  3:71515/148‑1 (MQ=255)                                                                                        aGGCCGCGCCAGGAGGCTTCCAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTcc                                                                                           <  6:7465/120‑1 (MQ=255)                                                                                        aGGCCGCGCCAGGAGGCTTCCAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTcc                                                                                           >  5:7465/1‑120 (MQ=255)                                                                                          gCCGCGCCAGGAGGCTTCCAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAGCACCt                                                            <  2:185236/149‑1 (MQ=255)                                                                                            cgcgCCAGGAGGCTTCCAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAGCACCTgg                                                          <  3:213978/149‑1 (MQ=255)                                                                                            cgcgCCAGGAGGCTTCCAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAGCACCTgg                                                          <  5:61962/149‑1 (MQ=255)                                                                                            cgcgCCAGGAGGCTTCCAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAGCACCTgg                                                          <  2:117008/149‑1 (MQ=255)                                                                                                  aggaggCTTCCAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCAGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAGCACCTGGTTCAc                                                     >  5:15334/1‑148 (MQ=255)                                                                                                       gCTTCCAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAGCACCTGGTTCACCAGTTc                                               >  8:232346/1‑149 (MQ=255)                                                                                                         ttCCAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAg                                                                 <  6:308910/129‑1 (MQ=255)                                                                                                         ttCCAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTCCTTGCACGGGGTCATCTCACCCTCGAg                                                                 >  5:308910/1‑129 (MQ=255)                                                                                                            cAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAGCACCTGGTTCACCAGTTCGCCa                                           >  7:97362/1‑148 (MQ=255)                                                                                                             aaCTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACCGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAGCACCTGGTTCACCAGTTCGCCaa                                          >  2:155989/1‑148 (MQ=255)                                                                                                                tgctgAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAGCAc                                                              <  1:95180/125‑1 (MQ=255)                                                                                                                tgctgAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAGCAc                                                              >  2:95180/1‑125 (MQ=255)                                                                                                                  ctgAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGAAGCGCGAATCGAGCACGGCGATCAGGTCCTTGATCGTGGTAATCTAACCCTCGAGCACCTGGTTCAACAGTTCGCCAATCAgg                                     >  4:46841/1‑148 (MQ=255)                                                                                                                             gggCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAGCACCTGGTTCACCAGTTCGCCAATCAGGTCGCGGGTGCgg                         >  2:229241/1‑149 (MQ=255)                                                                                                                               gCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAGCACCTGGTTCACCAGTTCGCCAATCAGGTCGCGGGTGCGGtt                       <  1:155989/149‑1 (MQ=255)                                                                                                                               gCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAGCACCTGGTTCACCAGTTCGCCAATCAGGTCGCGGGTGCGGtt                       <  1:229241/149‑1 (MQ=255)                                                                                                                                 gTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAGCACCTGGTTCACCAGTTCGCCAATCAGGTCGCGGGTGCGGTTgc                     <  6:15334/149‑1 (MQ=255)                                                                                                                                 gTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAGCACCTGGTTCACCAGTTCGCCAATCAGGTCGCGGGTGCGGTTgc                     <  7:232346/149‑1 (MQ=255)                                                                                                                                   gCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAGCACCTGGTTCACCAGTTCGCCAATCAGGTCGCGGGTGCGGTTgcgc                   >  6:16888/1‑149 (MQ=255)                                                                                                                                    cATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAGCACCTGGTTCACCAGTTCGCCAATCAGGTCGCGGGTGCGGTTGCGCt                  >  8:230155/1‑149 (MQ=255)                                                                                                                                             gTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAGCACCTGGTTCACCAGTTCGCCAATCAGGTCGCGGGTGCGGTTGCGCTCGgtgt            <  7:230155/146‑1 (MQ=255)                                                                                                                                                  tCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCGCGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAGCACCTGGTTCACCAGTTCGCCAATCAGGTCGCGGGTGCGGTTGCGCTCGgt              >  7:78461/1‑139 (MQ=255)                                                                                                                                                  tCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCGCGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAGCACCTGGTTCACCAGTTCGCCAATCAGGTCGCGGGTGCGGTTGCGCTCGgt              <  8:78461/139‑1 (MQ=255)                                                                                                                                                    TGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAGCACCTGGTTCACCAGTTCGCCAATCAGGTCGCGGGTGCGGTTGCGCTCGGTGTCGGAGCGGGc  <  3:66418‑M1/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                     AGGTCGCGTACCAGGTCTTTCTTCGAGGCATTGAGCAGGTGGATCTTCAGCGTGGTGCTGGTCTCGGTCTGGTCTACCTGGTATTTCAGGCCGCGCCAGGAGGCTTCCAACTGCTGAAACTCGCGGGCGTGCATGATCTCGTTCATCTGCTCGGAGAGCATCGCGTCGATCTCGGCGATGCGCGAATCGAGCACGGCGATCAGGTCCTTGCTCGGGGTCATCTCACCCTCGAGCACCTGGTTCACCAGTTCGCCAATCAGGTCGCGGGTGCGGTTGCGCTCGGTGTCGGAGCGGGC  >  NC_002947/3495810‑3496105

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.