New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3796293 =	49 (0.930)	4 (0.080)	4/242	NT	7.6%	coding (161/1884 nt)	fcs	feruloyl‑CoA‑synthetase
	?	NC_002947	3796330 =	50 (0.990)					coding (124/1884 nt)	fcs	feruloyl‑CoA‑synthetase

AAGCCCGCTCAGGGTCGACCGACCCTGGCCAACGTCCGCGCTACCGCCAGGTGGCCATCGGGCATCCCCAGGTGCAGGTCAGTCACGTCGACGACGTGCTGCGCATGCAACCTGTCGAGCCACTGGCGCCGCTGCCGGCGCGCCTGCTCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3796443‑3796293 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctcgaCAGGTTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCGGACGTTGGCCAGGGTCGGTCGA  >  NC_002947/3796330‑3796429                                                                                                                                                                                                                                                             AAGCCCGCTCAGGGTCGACCGACCCTGGCCAACGTCCGCGCTACCGCCAGGTGGCCATCGGGCATCCCCAGGTGCAGGTCAGTCACGTCGACGACGTGCTGCGCATGCAACCTGTCGAGCCACTGGCGCCGCTGCCGGCGCGCCTGCTC                                                                                                        <  8:211465/149‑1                                                                                                                CTGTCGAGCCACTGGCGCCGCTGCCGGCGCGCCTGCTCGACAGGTTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCGGACGTTGGCCAGGGTCGGTCGA  >  7:245085/1‑140                                                                                                                CTGTCGAGCCACTGGCGCCGCTGCCGGCGCGCCTGCTCGACAGGTTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCGGACGTTGGCCAGGGTCGGTCGA  <  8:245085/140‑1                                                                                                                       GCCACTGGCGCCGCTGCCGGCGCGCCTGCTCGACAGGTTGCATGCGCAGCACGTCGTCG                                                                            >  3:150698/1‑59                                                                                                                       GCCACTGGCGCCGCTGCCGGCGCGCCTGCTCGACAGGTTGCATGCGCAGCACGTCGTCG                                                                            <  4:150698/59‑1                                                                                                                                                                                                                                                             AAGCCCGCTCAGGGTCGACCGACCCTGGCCAACGTCCGCGCTACCGCCAGGTGGCCATCGGGCATCCCCAGGTGCAGGTCAGTCACGTCGACGACGTGCTGCGCATGCAACCTGTCGAGCCACTGGCGCCGCTGCCGGCGCGCCTGCTCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3796443‑3796293 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctcgaCAGGTTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGGCCACCTGGCGGTAGCGCGGACGTTGGCCAGGGTCGGTCGA  >  NC_002947/3796330‑3796429

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.