New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3796293 = | 49 (0.930) | 4 (0.080) | 4/242 | NT | 7.6% | coding (161/1884 nt) | fcs | feruloyl‑CoA‑synthetase |
? | NC_002947 | 3796330 = | 50 (0.990) | coding (124/1884 nt) | fcs | feruloyl‑CoA‑synthetase |
ACATCGGCGAGCATCTGCACGTAGCTGATCGAACGCCAGGCACCGTCTGCCTGGCGTGCCGCGATGAAAGTGGTGTCCGGGCGCACCTGGGCCCAATGCACCAGGCGCTCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAGG‑TTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGG‑CCACCTGGCGGTAGCGCGGACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTG > NC_002947/3796185‑3796468 | acaTCGGCGAGCATCTGCACGTAGCTGATCGAACGCCAGGCACCGTCTGCCTGGCGTGCCGCGATGAAAGTGGTGTCCGGGCGCACCTGGGCCCAATGCACCAGGCGCTCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAgg > 6:317549/1‑149 (MQ=255) acaTCGGCGAGCATCTGCACGTAGCTGATCGAACGCCAGGCACCGTCTGCCTGGCGTGCCGCGATGAAAGTGGTGTCCGGGCGCACCTGGGCCCAATGCACCAGGCGCTCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAgg > 5:168947/1‑149 (MQ=255) aTCGGCGAGCATCTGCACGTAGCTGATCGAACGCCAGGCACCGTCTGCCTGGCGTGCCGCGATGAAAGTGGTGTCCGGGCGCACCTGGGCCCAATGCACCAGGCGCTCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAGG‑tt < 6:19422/149‑1 (MQ=255) ggCGAGCATCTGCACGTAGCTTATCGAACGCCAGGCACCTTCTGCCTGGCGTGCCGCGATGAAAGTGGGGTCCGGGCGCACCTGGGCCCAATGCACCAGGCGCTCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAGG‑TTGc < 2:328385/148‑1 (MQ=255) tcgaccgaccctggccaacgtccgcgctaccgccaggtggccatcgggcatccccaggtgcaggtcagtcacgtcgacgacgtgctgcgcatgcaacctgTCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAg < 8:245085‑M1/40‑1 (MQ=255) tcgaccgaccctggccaacgtccgcgctaccgccaggtggccatcgggcatccccaggtgcaggtcagtcacgtcgacgacgtgctgcgcatgcaacctgTCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAg > 7:245085‑M1/101‑140 (MQ=255) gCATCTGCACGTAGCTGATCGAACGCCAGGCACCGTCTGCCTGGCGTGCCGCGATGAAAGTGGTGTCCGGGCGCACCTGGGCCCAATGCACCAGGCGCTCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAGG‑TTGCATgcgc < 5:317549/149‑1 (MQ=255) cTGCACGTAGCTGATCGAACGCCAGGCACCGTCTGCCTGGCGTGCCGCGATGAAAGTGGTGTCCGGGCGCACCTGGGCCCAATGCACCAGGCGCTCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAGG‑TTGCATGGgcagca > 2:291982/1‑149 (MQ=255) cTGCACGTAGCTGATCGAACGCCAGGCACCGTCTGCCTGGCGTGCCGCGATGAAAGTGGTGTCCGGGCGCACCTGGGCCCAATGCACCAGGCGCTCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAGG‑TTGCATGCgcagca > 6:105558/1‑149 (MQ=255) tGCACGTAGCTGATCGAACGCCAGGCACCGTCTGCCTGGCGTGCCGCGATGAAAGTGGTGTCCGGGCGCACCTGGGCCCAATGCACCAGGCGCTCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAGG‑TTGCATGCGCAGCAc > 4:180197/1‑149 (MQ=255) cACGTAGCTGATCGAACGCCAGGCACCGTCTGCCTGGCGTGCCGCGATGAAAGTGGTGTCCGGGCGCACCTGGGCCCAATGCACCAGGCGCTCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAGG‑TTGCATGCgcagca < 5:105558/146‑1 (MQ=255) gTAGCTGATCGAACGCCAGGCACCGTCTGCCTGGCGTGCCGCGATGAAAGTGGTGTCCGGGCGCACCTGGGCCCAATGCACCAGGCGCTCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAGG‑TTGCATGCGCAGCAcgtcgt < 1:9950/149‑1 (MQ=255) tAGCTGATCGAACGCCAGGCACCGTCTGCCTGGCGTGCCGCGATGAAAGTGGTGTCCGGGCGCACCTGGGCCCAATGCACCAGGCGCTCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAGG‑TTGCATGCGCAGCACgtcgtc > 2:39877/1‑149 (MQ=255) gCTGATCGAACGCCAGGCACCGTCTGCCTGGCGTGCCGCGATGAAAGTGGTGTCCGGGCGCACCTGGGCCCAATGCACCAGGCGCTCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAGG‑TTGCATGCGCAGCACGTCGTCGa < 3:180197/149‑1 (MQ=255) cTGATCGAACGCCAGGCACCGTGTGCCTGGCGTGCCGCGATGAAAGTGGTGTCCGGGCGCACCTGGGCCCAATGCACCAGGCGCTCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAGG‑TTGCATGCGCAGCACGTCGTCGAc > 7:53266/1‑149 (MQ=255) cTGATCGAACGCCAGGCACCGTCTGCCTGGCGTGCCGCGATGAAAGTGGTGTCCGGGCGCACCTGGGCCCAATGCACCAGGCGCTCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAGG‑TTGCATGCGCAGCACGTCGTCGAc < 1:336046/149‑1 (MQ=255) aTCGAACGCCAGGCACCGTCTGCCTGGCGTGCCGCGATGAAAGTGGTGTCCGGGCGCACCTGGGCCCAATGCACCAGGCGCTCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAGG‑TTGCATGCGCAGCACGTCGTCGACGt > 1:138489/1‑148 (MQ=255) gCCAGGCACCGTCTGCCTGGCGTGCCGCGATGAAAGTGGTGTCCGGGCGCACCTGGGCCCAATGCACCAGGCGCTCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGAc < 6:152682/112‑1 (MQ=255) gCCAGGCACCGTCTGCCTGGCGTGCCGCGATGAAAGTGGTGTCCGGGCGCACCTGGGCCCAATGCACCAGGCGCTCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAGG‑TTGCATGCGCAGCACGTCGTCGACGTGACTGAcc > 6:357225/1‑149 (MQ=255) accAGGCACCGTCTGCCTGGCGTGCCGCGATGAAAGTGGTGTCCGGGCGCACCTGGGCCCAATGCACCAGGCGCTCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAGG‑TTGCATGCGCAGCACGTCGTCGACGTGACTGAcc > 2:104646/2‑149 (MQ=255) cGTCTGCCTGGCGTGCCGCGATGAAAGTGGTGTCCGGGCGCACCTGGGCCCAATGCACCAGGCGCTCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAGG‑TTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTgg < 1:284901/149‑1 (MQ=255) ccTGGCGTGCCGCGATGAAAGTGGTGTCCGGGCGCACCTGGGCCCAATGCACCAGGCGCTCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAGG‑TTGCATGCGCAGCACGTCGTCGACGtga > 7:273816/1‑128 (MQ=255) ccTGGCGTGCCGCGATGAAAGTGGTGTCCGGGCGCACCTGGGCCCAATGCACCAGGCGCTCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAGG‑TTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATg < 6:34931/148‑1 (MQ=255) cTGGCGTGCCGCGATGAAAGTGGTGTCCGGGCGCACCTGGGCCCAATGCACCAGGCGCTCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAGG‑TTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGcc > 6:316564/1‑149 (MQ=255) tGGCGTGCCGCGATGAAAGTGGTGTCCGGGCGCACCTGGGCCCAATGCACCAGGCGCTCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAGG‑TTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGccc > 3:207857/1‑149 (MQ=255) gcgATGAAAGTGGTGTCCGGGCGCACCTGGGCCCAATGCACCAGGCGCTCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAGG‑TTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGG‑CCAc < 4:207857/149‑1 (MQ=255) gATGAAAGTGGTGTCCGGGCGCACCTGGGCCCAATGCACCAGGCGCTCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAGG‑TTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGG‑CCACCt < 1:291982/149‑1 (MQ=255) tGAAAGTGGTGTCCGGGCGCACCTGGGCCCAATGCACCAGGCGCTCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAGG‑TTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGG‑CCACCTgg > 3:168416/1‑149 (MQ=255) aaGGGGTGTCCGGGCGCACCTGGGCCCAATGCACCAGGCGCGCGAGCAGGCGCGCCGGCAGCGGGGCCAGTGGGTCGACAGGCCTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGG‑CCACCTGGCg < 1:104646/149‑1 (MQ=255) tgtCCGGGCGCACCTGGGCCCAATGCACCAGGCGCTCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAGG‑TTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGG‑CCACCTGGCGGTAgcgc < 1:39877/149‑1 (MQ=255) gtCCGGGCGCACCTGGGCCCAATGCACCAGGCGCTCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAGG‑TTGCATGCGCAGCAcgtcg < 3:264688/94‑1 (MQ=255) gtCCGGGCGCACCTGGGCCCAATGCACCAGGCGCTCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAGG‑TTGCATGCGCAGCAcgtcg > 4:264688/1‑94 (MQ=255) tCCGGGCGCACCTGGGCCCAATGCACCAGGCGCTCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAGG‑TTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGG‑CCACCTGGCGGTAGcgcg > 1:152902/1‑148 (MQ=255) tCCGGGCGCACCTGGGCCCAATGCACCAGGCGCTCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAGG‑TTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGG‑CCACCTGGCGGTAGcgcg < 5:316564/148‑1 (MQ=255) cGGGCGCACCTGGGCCCAATGCACCAGGCGCTCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAGG‑TTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGG‑CCACCTGGCGGTa > 4:127246/1‑141 (MQ=255) cGGGCGCACCTGGGCCCAATGCACCAGGCGCTCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAGG‑TTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGG‑CCACCTGGCGGTa < 3:127246/141‑1 (MQ=255) cGGGCGCACCTGGGCCCAATGCACCAGGCGCTCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAGG‑TTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGG‑CCACCTGGCGGTAGCGCGGAc > 8:120241/1‑149 (MQ=255) cgcACCTGGGCCCAATGCACCAGGCGCTCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAGG‑TTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGG‑CCACCTGGCGGTAGCGCGGACGTTg < 5:357225/149‑1 (MQ=255) aCCTGGGCCCAATGCACCAGGCGCTCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAGG‑TTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGG‑CCACCTGGCGGTAGCGCGGACGTTGGc > 8:18101/1‑148 (MQ=255) cTGGGCCCAATGCACCAGGCGCTCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAGG‑TTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGG‑CCACCTGGCGGTAGCGCGGACGTTGGCCAg > 5:275539/1‑149 (MQ=255) ggCCCAATGCACCAGGCGCTCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAGG‑TTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGG‑CCACCTGGCGGTAGCGCGGACGt > 5:348040/1‑139 (MQ=255) ggCCCAATGCACCAGGCGCTCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAGG‑TTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGG‑CCACCTGGCGGTAGCGCGGACGt < 6:348040/139‑1 (MQ=255) ggCCCAATGCACCAGGCGCTCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAGG‑TTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGG‑CCACCTGGCGGTAGCGCGGACGTTGGCCAGggt < 7:120241/149‑1 (MQ=255) cccAATGCACCAGGCGCTCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAGG‑TTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGG‑CCACCTGGCGGTAGCGCGGACGTTGGCCAGggtcg < 2:152902/149‑1 (MQ=255) cAATGCACCAGGCGCTCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAGG‑TTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGG‑CCACCTGGCGGTAGCGCGGACGTTGGCCAGggtcggt < 6:168947/149‑1 (MQ=255) ctgtcgagccactggcgccgctgccggcgcgcctgctcgaCAGG‑TTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGG‑CCACCTGGCGGTAGCGCGGACGTTGGCCAGGGTCGGTCGa > 7:245085‑M2/41‑140 (MQ=255) ctgtcgagccactggcgccgctgccggcgcgcctgctcgaCAGG‑TTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGG‑CCACCTGGCGGTAGCGCGGACGTTGGCCAGGGTCGGTCGa < 8:245085‑M2/100‑1 (MQ=255) cTCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAGG‑TTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGG‑CCACCTGGCGGTAGCGCGGACGTTGGCCAGGGTCGGTCGACCCTGAGCggg < 8:53266/149‑1 (MQ=255) GAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAGG‑TTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGG‑CCACCTGGCGGTAGCGCGGACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCtt < 8:211465‑M1/149‑1 (MQ=255) gccactggcgccgctgccggcgcgcctgctcgaCAGG‑TTGCATGCGCAGCACGtcgtcg < 4:150698‑M2/26‑1 (MQ=255) gccactggcgccgctgccggcgcgcctgctcgaCAGG‑TTGCATGCGCAGCACGtcgtcg > 3:150698‑M2/34‑59 (MQ=255) aGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAGG‑TTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGG‑CCACCTGGCGGTAGCGCGGACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGtt < 4:168416/149‑1 (MQ=255) gcgcgcCGGCAGCGGCGCCAGTGGCTCGACAGG‑TTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGGCCCACCTGGCGGTAGCGCGGACGTTGGCCAGGGTCGGTCGACCCTGa < 1:73765/136‑1 (MQ=255) gcgcgcCGGCAGCGGCGCCAGTGGCTCGACAGG‑TTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGG‑CCACCTGGCGGTAGCGCGGAc > 4:60495/1‑110 (MQ=255) gcgcgcCGGCAGCGGCGCCAGTGGCTCGACAGG‑TTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGG‑CCACCTGGCGGTAGCGCGGAc < 3:60495/110‑1 (MQ=255) gcgcgcCGGCAGCGGCGCCAGTGGCTCGACAGG‑TTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGG‑CCACCTGGCGGTAGCGCGGACGTTGGCCAGGGTCGGTCGACCCTGa > 2:73765/1‑135 (MQ=255) cgcCGGCAGCGGCGCCAGTGGCTCGACAGG‑TTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGG‑CCACCTGGCGGTAGCGCGGACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCa < 6:275539/149‑1 (MQ=255) gCAGCGGCGCCAGTGGCTCGACAGG‑TTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGG‑CCACCTGGCGGTAGCGCGGACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAg > 6:147429/1‑149 (MQ=255) cggcgCCAGTGGCTCGACAGG‑TTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGG‑CCACCTGGc > 6:12255/1‑86 (MQ=255) cgcCAGTGGCTCGACAGG‑TTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGG‑CCACCTGGCGGTAGCGCGGACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTc > 8:42669/1‑149 (MQ=255) aGTGGCTCGACAGG‑TTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGG‑CCACCTGGCGGTAGCGCGGACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCcttg < 7:42669/149‑1 (MQ=255) | ACATCGGCGAGCATCTGCACGTAGCTGATCGAACGCCAGGCACCGTCTGCCTGGCGTGCCGCGATGAAAGTGGTGTCCGGGCGCACCTGGGCCCAATGCACCAGGCGCTCGAGCAGGCGCGCCGGCAGCGGCGCCAGTGGCTCGACAGG‑TTGCATGCGCAGCACGTCGTCGACGTGACTGACCTGCACCTGGGGATGCCCGATGG‑CCACCTGGCGGTAGCGCGGACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTG > NC_002947/3796185‑3796468 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |