New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3958559	44 (0.830)	3 (0.060)	3/240	NT	6.9%	coding (1826/5844 nt)	mnxG	manganese‑oxidizing multicopper oxidase
	?	NC_002947	= 3958588	39 (0.780)					coding (1797/5844 nt)	mnxG	manganese‑oxidizing multicopper oxidase

CTGGCGTGGTCGTCATCATCCTCGTCTTCGTGGTCATCATCGTTGGCGGCAACCAATGCTTCGGAAAGCTTGGGCACGACCACGACTTTGCCGGGCATGGGCGCCATGGCCTTGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3958442‑3958559 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgccggTACGCCGATTCCGGCCATCGTGCCGTTGCCCGGCAAGGCCATGGCGCCCATGCCCGGCAAAGTCGTGGTCGTGCCCAAGCTTTCCGAAGCATTGGTTGCCGCCAACGATGATGACCACGAAGACGAGGATGATGACGACCACGCCAG  <  NC_002947/3958588‑3958442                                                                                                                                                                                                                                                                           CTGGCGTGGTCGTCATCATCCTCGTCTTCGTGGTCATCATCGTTGGCGGCAACCAATGCTTCGGAAAGCTTGGGCACGACCACGACTTTGCCGGGCATGGGCGCCATGGCCTTGCCGGTACGCCGATTCCGGCCATCGTGCCGTTGCCC                                                                                                                      <  4:125470/149‑1                TCATCCTCGTCTTCGTGGTCATCATCGTTGGCGGCAACCAATGCTTCGGAAAGCTTGGGCACGACCACGACTTTGCCGGGCATGGGCGCCATGGCCTTGCCGGTACGCCGATTCCGGCCATCGTGCCGTTGCCCGGCAAGGC                                                                                                              >  3:271455/1‑142                TCATCCTCGTCTTCGTGGTCATCATCGTTGGCGGCAACCAATGCTTCGGAAAGCTTGGGCACGACCACGACTTTGCCGGGCATGGGCGCCATGGCCTTGCCGGTACGCCGATTCCGGCCATCGTGCCGTTGCCCGGCAAGGC                                                                                                              <  4:271455/142‑1                                                                                                                   CCGGTACGCCGATTCCGGCCATCGTGCCGTTGCCCGGCAAGGTCATGGCGCCCATGCCCGGCAAAGTCGTGGTCGTGCCCAAGCTTTCCGAAGCATTGGTTGCCGCCAACGATGATGACCACGAAGACGAGGATGAT                <  3:323637/137‑1                                                                                                                   CCGGTACGCCGATTCCGGCCATCGTGCCGTTGCCCGGCAAGGTCATGGCGCCCATGCCCGGCAAAGTCGTGGTCGTGCCCAAGCTTTCCGAAGCATTGGTTGCCGCCAACGATGATGACCACGAAGACGAGGATGAT                >  4:323637/1‑137                                                                                                                     GGTACGCCGATTCCGGCCATCGTGCCGTTGCCCGGCAAGGCCATGGCGCCCATGCCCGGCAAAGTCGTGGTCGTGCCCAAGCTTTCCGAAGCATTGGTTGCCGCCAACGATGATGACCACGAAGACGAGGATGATGACGACCACGCCAG  >  2:316454/1‑149                                                                                                                                                                                                                                                                           CTGGCGTGGTCGTCATCATCCTCGTCTTCGTGGTCATCATCGTTGGCGGCAACCAATGCTTCGGAAAGCTTGGGCACGACCACGACTTTGCCGGGCATGGGCGCCATGGCCTTGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3958442‑3958559 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgccggTACGCCGATTCCGGCCATCGTGCCGTTGCCCGGCAAGGCCATGGCGCCCATGCCCGGCAAAGTCGTGGTCGTGCCCAAGCTTTCCGAAGCATTGGTTGCCGCCAACGATGATGACCACGAAGACGAGGATGATGACGACCACGCCAG  <  NC_002947/3958588‑3958442

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.