| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4012710 = | 37 (0.700) | 3 (0.060) | 3/240 | NT | 6.6% | coding (546/900 nt) | mvaB | hydroxymethylglutaryl‑CoA lyase |
| ? | NC_002947 | 4012765 = | 50 (1.000) | coding (601/900 nt) | mvaB | hydroxymethylglutaryl‑CoA lyase | |||||
GCGCGGTACCTGGGCCGACACCACCTCGAACAGGCGTCGGGTGTCGCCTGCGGTACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4012767‑4012710‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtaccgCGCGAGCAGTTGGCCGGACACTTCCATGACACTTACGGCCAGGCCTTGGCTAACGTCTATGCCAGCCTGCTCGAGGGCATCAGCGTATTCGACAGCTCGGTAGCCGGGCTGGGCGGCTGCCCTTACGCCAAGGGTGCTACCGGCAATA > NC_002947/4012765‑4012912 GCGCGGTACCTGGGCCGACACCACCTCGAACAGGCGTCGGGTGTCGCCTGCGGTACCGCGCGAGCAGTTGGCCGGACACTTCCATGACACTTACGGCCAGGCCTTGGCTAACGTCTATGCCAGCCTGCTCGAGGGCATCAGCGTATTC < 5:87118/148‑1GCGCGGTACCTGGGCCGACACCACCTCGAACAGGCGTCGGGTGTCGCCTGCGGTACCGCGCGAGCAGTTGGCCGGACACTTCCATGACACTTACGGCCAGGCCTTGGCTAACGTCTATGCCAGCCTGCTCGAGGGCATCAGCGTATTC > 6:87118/1‑148 GCGGTACCTGGGCCGACACCACCTCGAACAGGCGTCGGGTGTCGCCTGCGGTACCGCGCGAGCAGTTGGCCGGACACTTCCATGACACTTACGGCCAGGCCTTGGCTAACGTCTATGCCAGCCTGCTCGAGGGC < 2:316976/134‑1 TACCGCGCGAGCAGTTGGCCGGACACTTCCATGACACTTACGGCCAGGCCTTGGCTAACGTCTATGCCAGCCTGCTCGAGGGCATCAGCGTATTCGACAGCTCGGTAGCCGGGCTGGGCGGCTGCCCTTACGCCAAGGGTGCTACCGGC < 2:62680/149‑1 ACCGCGCGAGCAGTTGGCCGGACACTTCCATGACACTTACGGCCAGGCCTTGGCTAACGTCTATGCCAGCCTGCTCGAGGGCATCAGCGTATTCGACAGCTCGGTAGCCGGGCTGGGCGGCTGCCCTTACGCCAAGGGTGCTACCGGC > 6:53565/1‑148 GCGCGAGCAGTTGGCCGGACACTTCCATGACACTTACGGCCAGGCCTTGGCTAACGTCTATGCCAGCCTGCTCGAGGGCATCAGCGTATTCGACAGCTCGGTAGCCGGGCTGGGCGGCTGCCCTTACGCCAAGGGTGCTACCGGCAATA < 3:342126/149‑1 GCGCGAGCAGTTGGCCGGACACTTCCATGACACTTACGGCCAGGCCTTGGCTAACGTCTATGCCAGCCTGCTCGAGGGCATCAGCGTATTCGACAGCTCGGTAGCCGGGCTGGGCGGCTGCCCTTACGCCAAGGGTGCTACCGGCAATA > 4:342126/1‑149 GCGCGGTACCTGGGCCGACACCACCTCGAACAGGCGTCGGGTGTCGCCTGCGGTACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4012767‑4012710‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtaccgCGCGAGCAGTTGGCCGGACACTTCCATGACACTTACGGCCAGGCCTTGGCTAACGTCTATGCCAGCCTGCTCGAGGGCATCAGCGTATTCGACAGCTCGGTAGCCGGGCTGGGCGGCTGCCCTTACGCCAAGGGTGCTACCGGCAATA > NC_002947/4012765‑4012912 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |