New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4210980	43 (0.810)	4 (0.080)	4/240	NT	8.8%	coding (97/285 nt)	PP_5621	hypothetical protein
	?	NC_002947	= 4210995	42 (0.840)					coding (82/285 nt)	PP_5621	hypothetical protein

CAATACCGATCAAGCTACCGGCGATGAGCTCCCGGATGGCTGTCGCCTCCATGAAGTGACGCAGCCGACTTGCAGCTTCGCGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4210827‑4210980 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgcaagTCTTGCATTCCGCAGCTTGCATGCTTGTGTCAGTGGTTGGAGATTGAGATGCAACCTCAAAAAACTAGAAATCATCTGATCAACGAGCGCGAAGCTGCAAGTCGGCTGCGTCACTTCATGGAG  <  NC_002947/4210995‑4210873                                                                                                                                                                                                                                                                                       CAATACCGATCAAGCTACCGGCGATGAGCTCCCGGATGGCTGTCGCCTCCATGAAGTGACGCAGCCGACTTGCAGCTTCGCGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCAT                                                                                                                                  >  2:178499/1‑149  AATACCGATCAAGCTACCGGCGATGAGCTCCCGGATGGCTGTCGCCTCCATGAAGTGACGCAGCCGACTTGCAGCTTCGCGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATG                                                                                                                                 >  6:235912/1‑149                                         TGTCGCCTCCATGAAGTGACGCAGCCGACTTGCAGCTTCGCGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAG                                                                                                                             >  3:314818/1‑114                                         TGTCGCCTCCATGAAGTGACGCAGCCGACTTGCAGCTTCGCGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAG                                                                                                                             <  4:314818/114‑1                                                 CCATGAAGTGACGCAGCCGGCTTGCAGCTTCGCGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGTCTTGCATTCCGCAGCTTGCATGCTTGTGT                                                                                               >  1:189131/1‑136                                                 CCATGAAGTGACGCAGCCGGCTTGCAGCTTCGCGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGTCTTGCATTCCGCAGCTTGCATGCTTGTGT                                                                                               <  2:189131/136‑1                                                   ATGAAGTGACGCAGCCGACTTGCAGCTTCGCGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGTCTTGCATTCCGCAGCTTGCATGCTTGT                                                                                                 >  7:322796/1‑132                                                   ATGAAGTGACGCAGCCGACTTGCAGCTTCGCGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGTCTTGCATTCCGCAGCTTGCATGCTTGT                                                                                                 <  8:322796/132‑1                                                                                                                                                        AAGTCTTGCATTCCGCAGCTTGCATGCTTGTGTCAGTGGTTGGAGATTGAGATGCAACCTCAAAAAACTAGAAATCATCTGATCAACGAGCGCGAAGCTGCAAGTCGGCTGCGTCACTTCATGGAG  <  8:147991/126‑1                                                                                                                                                                                                                                                                                       CAATACCGATCAAGCTACCGGCGATGAGCTCCCGGATGGCTGTCGCCTCCATGAAGTGACGCAGCCGACTTGCAGCTTCGCGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4210827‑4210980 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgcaagTCTTGCATTCCGCAGCTTGCATGCTTGTGTCAGTGGTTGGAGATTGAGATGCAACCTCAAAAAACTAGAAATCATCTGATCAACGAGCGCGAAGCTGCAAGTCGGCTGCGTCACTTCATGGAG  <  NC_002947/4210995‑4210873

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.