| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4591748 = | 32 (0.610) | 3 (0.060) | 3/246 | NT | 8.8% | coding (7/1953 nt) | mccA | methylcrotonyl‑CoA carboxylase biotin‑containing subunit alpha |
| ? | NC_002947 | 4591788 = | 31 (0.610) | coding (47/1953 nt) | mccA | methylcrotonyl‑CoA carboxylase biotin‑containing subunit alpha | |||||
GACGGGCGTCACGGTCGGTGGCGCTGTGCACGGCGACAGTGGTCAGGCCCATGGCCTTGGCGGTGCGCATCACCCGGCAGGCGATTTCGCCGCGGTTGGCGACCAGCAGGGTGGTCAAAGCGGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4591874‑4591748‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgAAATCGCCTGCCGGGTGATGCGCACCGCCAAGGCCATGGGCCTGACCACTGTCGCCGTGCACAGCGCCACCGACCGTGACGCCCGTCACAGCCGCGAAGCCGACATCCGCGTCGACCTGGGCGGCACCAAGGCTGCCGAAAGCTACCT > NC_002947/4591788‑4591935 GACGGGCGTCACGGTCGGTGGCGCTGTGCACGGCGACAGTGGTCAGGCCCATGGCCTTGGCGGTGCGCATCACCCGGCAGGCGATTTCGCCGCGGTTGGCGACCAGCAGGGTGGTCAAAGCGGGG > 3:268231/1‑125GACGGGCGTCACGGTCGGTGGCGCTGTGCACGGCGACAGTGGTCAGGCCCATGGCCTTGGCGGTGCGCATCACCCGGCAGGCGATTTCGCCGCGGTTGGCGACCAGCAGGGTGGTCAAAGCGGGG < 4:268231/125‑1 GATTTCGCCGCGGTTGGCGACCAGCAGGGTGGTCAAAGCGGGGCGAAATCGCCTGCCGGGTGATGCGCACCGCCAAGGCCATGGGCCTGACC > 7:203773/1‑92 GATTTCGCCGCGGTTGGCGACCAGCAGGGTGGTCAAAGCGGGGCGAAATCGCCTGCCGGGTGATGCGCACCGCCAAGGCCATGGGCCTGACC < 8:203773/92‑1 GCCGCGGTTGGCGACCAGCAGGGTGGTCAAAGCGGGGCGAAATCGCCTGCCGGGTGATGCGCACCGCCAAGGCCATGGGCCTGACCACTGTCGCCGTGCACAGCGCCACCGACCGTGACGCCCGTCACAGCCGCGAAGCCGACATCCGC > 7:181613/1‑149 GGCGAAATCGCCTGCCGGGTGATGCGCACCGCCAAGGCCATGGGCCTGACCACTGTCGCCGTGCACAGCGCCACCGACCGTGACGCCCGTCACAGCCGCGAAGCCGACATCCGCGTCGACCTGGGCGGCACCAAGGCTGCCGAAAGCTA < 6:139822/149‑1 CGAAATCGCCTGCCGGGTGATGCGCACCGCCAAGGCCATGGGCCTGACCACTGTCGCCGTGCACAGCGCCACCGACCGTGACGCCCGTCACAGCCGCGAAGCCGACATCCGCGTCGACCTGGGCGGCACCAAGGCTGCCGAAAGCTACC < 6:143772/149‑1 GAAATCGCCTGCCGGGTGATGCGCACCGCCAAGGCCATGGGCCTGACCACTGTCGCCGTGCACAGCGCCACCGACCGTGACGCCCGTCACAGCCGCGAAGCCGACATCCGCGTCGACCTGGGCGGCACCAAGGCTGCCGAAAGCTACCT > 2:246956/1‑149 GAAATCGCCTGCCGGGTGATGCGCACCGCCAAGGCCATGGGCCTGACCACTGTCGCCGTGCACAGCGCCACCGACCGTGACGCCCGTCACAGCCGCGAAGCCGACATCCGCGTCGACCTGGGCGGCACCAAGGCTGCCGAAAGCTACCT > 3:28962/1‑149 GACGGGCGTCACGGTCGGTGGCGCTGTGCACGGCGACAGTGGTCAGGCCCATGGCCTTGGCGGTGCGCATCACCCGGCAGGCGATTTCGCCGCGGTTGGCGACCAGCAGGGTGGTCAAAGCGGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4591874‑4591748‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgAAATCGCCTGCCGGGTGATGCGCACCGCCAAGGCCATGGGCCTGACCACTGTCGCCGTGCACAGCGCCACCGACCGTGACGCCCGTCACAGCCGCGAAGCCGACATCCGCGTCGACCTGGGCGGCACCAAGGCTGCCGAAAGCTACCT > NC_002947/4591788‑4591935 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |