New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4591748 =	32 (0.610)	3 (0.060)	3/246	NT	8.8%	coding (7/1953 nt)	mccA	methylcrotonyl‑CoA carboxylase biotin‑containing subunit alpha
	?	NC_002947	4591788 =	31 (0.610)					coding (47/1953 nt)	mccA	methylcrotonyl‑CoA carboxylase biotin‑containing subunit alpha

AACTCAGCCCGGCCCTGCGCCGTTACTGCGAAAACACCATCGCCCGTATCCGCGTCAGCGCCGAAGGCCAGGAGGGCCTGCGCGCTTTCCTGGAAAAACGCCGCCCTGCCTGGCAAACCGTTGACAAGAAGGAGCCGCGCCCATGAGCCGCCCCGCTTTGACCACCCTGCTGGTCGCCAACCGCGGCGAAATCGCCTGCCGGGTGATGCGCACCGCCAAGGCCATGGGCCTGACCACTGTCGCCGTGCACAGCGCCACCGACCGTGACGCCCGTCACAGCCGCGAAGCCGAC  >  NC_002947/4591600‑4591891                                                                                                                                                     |                                                                                                                                                aggtagctttcggcagccttggtgccgcccaggtcgacgcggatgtcggcttcgcggctgtgacgggcgtcacggtcggtggcgctgtgcacggcgacagtggtcaggcccatggccttggcggtgcgcatcacccggcaggcgatttc                                                                                                                                                 >  2:246956‑M1/149‑149 (MQ=255) aggtagctttcggcagccttggtgccgcccaggtcgacgcggatgtcggcttcgcggctgtgacgggcgtcacggtcggtggcgctgtgcacggcgacagtggtcaggcccatggccttggcggtgcgcatcacccggcaggcgatttc                                                                                                                                                 >  3:28962‑M1/149‑149 (MQ=255)  ggtagctttcggcagccttggtgccgcccaggtcgacgcggatgtcggcttcgcggctgtgacgggcgtcacggtcggtggcgctgtgcacggcgacagtggtcaggcccatggccttggcggtgcgcatcacccggcaggcgatttCg                                                                                                                                                <  6:143772‑M1/2‑1 (MQ=255)    tagctttcggcagccttggtgccgcccaggtcgacgcggatgtcggcttcgcggctgtgacgggcgtcacggtcggtggcgctgtgcacggcgacagtggtcaggcccatggccttggcggtgcgcatcacccggcaggcgatttCGcc                                                                                                                                              <  6:139822‑M1/4‑1 (MQ=255)    tCAGCCCGGCCCTGCGCCGTTACTGCGAAAACACAATCGCCCGTATCCGCGTCAGCGCCGAAGGCCAGGAGGGCCTGCGCGCTTTCCTGGAAAAACGCCGCCCTGCCTGGCAAACCGTTGACAAGAAGGAGCCGCGCCCATGAgccgcc                                                                                                                                              >  7:330699/1‑149 (MQ=255)        cccGGCCCTGCGCCGTTACTGCGAAAACACCATCGCCCGTATCCGCGTCAGCGCCGAAGGCCAGGAGGGCCTGCGCGCTTTCCTGGAAAAACGCCGCCCTGCCTGGCAAACCGTTGACAAGAAGGAGCCGCGCCCATGAGCCGCCCCGc                                                                                                                                          >  7:328109/1‑149 (MQ=255)            gCCCTGCGCCGTTACTGCGAAAACACCATCGCCCGTATCCGCGTCAGCGCCGAAGGCCAGGAGGGCCTGCGCGCTTTCCTGGAAAAACGCCGCCCTGCCTGGCAAACCGTTGACAAGAAGGAGCCGCGCCCATGAGCCGCCCCGCttt                                                                                                                                       >  7:49394/1‑148 (MQ=255)             cccTGCGCCGTTACTGCCAAAACACCATCGCCCGTATCCGCGTCAGCGCCGAAGGCCAGGAGGGCCTGCGCGCTTTCCTGGAAAAACGCCGCCCTGCCTGGCAAACCGTTGACAAGAAGGAGCCGCGCCCATGAGCCGCCCCGCTTTGa                                                                                                                                     <  8:330699/149‑1 (MQ=255)                  cgcCGTTACTGCGAAAACACCATCGCCCGTATCCGCGTCAGCGCCGAAGGCCAGGAGGGCCTGCGCGCTTTCCTGGAAAAACGCCGCCCTGCCTGGCAAACCGTTGACAAGAAGGAGCCGCGCCCATGAGCCGCCCCGCTTTGaccacc                                                                                                                                <  5:116240/149‑1 (MQ=255)                    ccGTTACTGCGAAAACACCATCGCCCGTATCCGCGTCAGCGCCGAAGGCCAGGAGGGCCTGCGCGCTTTCCTGGAAAAACGCCGCCCTGCCTGGCAAACCGTTGACAAGAAGGAGCCGCGCCCATGAGCCGCCCCGCTTTGACCACCct                                                                                                                              >  8:115910/1‑149 (MQ=255)                         aCTGCGAAAACACCATCGCCCGTATCCGCGTCAGCGCCGAAGGCCAGGAGGGCCTGCGCGCTTTCCTGGAAAAACGCCGCCCTGCCTGGCAAACCGTTGACAAGAAGGAGCCGCGCCCATGAGCCGCCCCGCTTTGACCACCctgctg                                                                                                                          <  8:49394/148‑1 (MQ=255)                         aCTGCGAAAACACCATCGCCCGTATCCGCGTCAGCGCCGAAGGCCAGGAGGGCCTGCGCGCTTTCCTGGAAAAACGCCGCCCTGCCTGGCAAACCGTTGACAAGAAGGAGCCGCGCCCATGAGCCGCCCCGCTTTGACCACCctgctg                                                                                                                          <  2:134480/148‑1 (MQ=255)                          cTGCGAAAACACCATCGCCCGTATCCGCGTCAGCGCCGAAGGCCAGGAGGGCCTGCGCGCTTTCCTGGAAAAACGCCGCCCTGCCTGGCAAACCGTTGACAAGAAGGAGCCGCGCCCATGAGCCGCCCCGc                                                                                                                                          <  7:240190/131‑1 (MQ=255)                           tGCGAAAACACCATCGCCCGTATCCGCGTCAGCGCCGAAGGCCAGGAGGGCCTGCGCGCTTTCCTGGAAAAACGCCGCCCTGCCTGGCAAACCGTTGACAAGAAGGAGCCGCGCCCATGAGCCGCCCCGCTTTGACCACCCTGCTGGTc                                                                                                                       <  8:328109/149‑1 (MQ=255)                             cGAAAACACCATCGCCCGTATCCGCGTCAGCGCCGAAGGCCAGGAGGGCCTGCGCGCTTTCCTGGAAAAACGCCGCCCTGCCTGGCAAACCGTTGACAAGAAGGAGCCGCGCCCATGAGCCGCCCCGCTTTGACCACCCTGCTGGTCGc                                                                                                                     <  8:14083/149‑1 (MQ=255)                                     ccATCGCCCGTATCCGCGTCAGCGCCGAAGGCCAGGAGGGCCTGCGCGCTTTCCTGGAAAAACGCCGCCCTGCCTGGCAAACCGTTGACAAGAAGGAGCCGCGCCCATGAGCCGCCCCGCTTTGACCACCCTGCTGGTCGCCAACcgcg                                                                                                             <  6:35332/149‑1 (MQ=255)                                      cATCGCCCGTATCCGCGTCAGCGCCGAAGGCCAGGAGGGCCTGCGCGCTTTCCTGGAAAAACGCCGCCCTGCCTGGCAAACCGTTGACAAGAAGGAGCCGCGCCCATGAGCCGCCCCGCTTTGACCACCCTGCTGGTCGCCAACCgcgg                                                                                                            <  7:49127/149‑1 (MQ=255)                                       gcggatgtcggcttcgcggctgtgacgggcgtcacggtcggtggcgctgtgcacggcgacagtggtcaggcccatggccttggcggtgcgcatcacccggcaggcgatttCGCCCCGCTTTGACCACCCTGCTGGTCGCCAACCgcggc                                                                                                           >  7:181613‑M1/111‑149 (MQ=255)                                                                                 cgcgcTTTCCTGGAAAAACGCCGCCCTGCCTGGCAAACCGTTGACAAGAAGGAGCCGCGCCCATGAGCCGCCCCGCTTTGACCACCCTGCTGGTCGCCAACCGCGGCGAAATCGCCTGCCGGGTGATGCGCACCGcc                                                                             >  1:43314/1‑137 (MQ=255)                                                                                 cgcgcTTTCCTGGAAAAACGCCGCCCTGCCTGGCAAACCGTTGACAAGAAGGAGCCGCGCCCATGAGCCGCCCCGCTTTGACCACCCTGCTGGTCGCCAACCGCGGCGAAATCGCCTGCCGGGTGATGCGCACCGcc                                                                             <  2:43314/137‑1 (MQ=255)                                                                                 cgcgcTTTCCTGGAAAAACGCCGCCCTGCCTGGCAAACCGTTGACAAGAAGGAGCCGCGCCCATGAGCCGCCCCGCTTTGACCACCCTGCTGGTCGCCAACCGCGGCGAAATCGCCTGCCGGGTGATGCGCACCGCCAAGGCCATgg                                                                   <  7:115910/147‑1 (MQ=255)                                                                                           tGGAAAAACGCCGCCCTGCCTGGCAAACCGTTGACAAGAAGCAGCCGCGCCCATGAGCCGCCCCGCTTTGACCACCCTGCTGGTCGCCAACCGCGGCGAAATCGCCTGCCGGGTGATGCGCACCGCCAAGGCCATGGGCCTGACCACTg                                                       >  3:191404/1‑149 (MQ=255)                                                                                                  aCGCCGCCCTGCCTGGCAAACCGTTGACAAGAAGGAGCCGCGCCCATGAGCCGCCCCGCTTTGACCACCCTGCTGGTCGCCAACCGCGGCGAAATCGCCTGCCGGGTGATGCGCACCGCCAAGGCCATGGGCCTGACCACTGTCGCCGt                                                <  2:114130/149‑1 (MQ=255)                                                                                                  aCGCCGCCCTGCCTGGCAAACCGTTGACAAGAAGGAGCCGCGCCCATGAGCCGCCCCGCTTTGACCACCCTGCTGGTCGCCAACCGCGGCGAAATCGCCTGCCGGGTGATGCGCACCGCCAAGGCCATGGGCCTGACCACTGTCGCCGt                                                >  1:114130/1‑149 (MQ=255)                                                                                                      ggtcaggcccatggccttggcggtgcgcatcacccggcaggcgatttCGCCCCGCTTTGACCACCCTGCTGGTCGCCAACCGCGGCGAAATc                                                                                                     >  7:203773‑M1/48‑92 (MQ=255)                                                                                                      ggtcaggcccatggccttggcggtgcgcatcacccggcaggcgatttCGCCCCGCTTTGACCACCCTGCTGGTCGCCAACCGCGGCGAAATc                                                                                                     <  8:203773‑M1/45‑1 (MQ=255)                                                                                                       gccCTGCCTGGCAAACCGTTGACAAGAAGGAGCCGCGCCCATGAGCCGCCCCGCTTTGACCACCCTGCTGGTCGCCAACCGCGGCGAAATCGCCTGCCGGGTGATGCGCACCGCCAAGGCCATGGGCCTGACCACTGTCGCCGTGca                                             >  7:47413/1‑147 (MQ=255)                                                                                                         cctgcctgGCAAACCGTTGACAAGAAGGAGCCGCGCCCATGAGCCGCCCCGCTTTGACCACCCTGCTGGTCGCCAACCGCGGCGAAATCGCCTGCCGGGTGATGCGCACCGCCAAGGCCATGGGCCTGACCACTGTCGCCGTGCACAgc                                         >  7:223254/1‑149 (MQ=255)                                                                                                          ctgcctgGCAAACCGTTGACAAGAAGGAGCCGCGCCCATGAGCCGCCCCGCTTTGACCACCCTGCTGGTCGCCAACCGCGGCGAAATCGCCTGCCGGGTGATGCGCACCGCCAAGGCCATGGGCCTGAcc                                                           <  4:339058/130‑1 (MQ=255)                                                                                                               tgGCAAACCGTTGACAAGAAGGAGCCGCGCCCATGAGCCGCCCCGCTTTGACCACCCTGCTGGTCGCCAACCGCGGCGAAATCGCCTGCCGGGTGATGCGCACCGCCAAGGCCATGGGCCTGACCACTGTCGCCGTGCACAGCGCCacc                                   >  2:112457/1‑149 (MQ=255)                                                                                                                        gTTGACAAGAAGGAGCCGCGCCCATGAGCCGCCCCGCTTTGACCACCCTGCTGGTCGCCAACCGCGGCGAAATCGCCTGCCGGGTGATGCGCACCGCCAAGGCCATGGGCCTGACCACTGTCGCCGTGCACAGCGCCACCGACCGTGAc                          >  8:238689/1‑149 (MQ=255)                                                                                                                                gaagGAGCCGCGCCCATGAGCCGCCCCGCTTTGACCACCCTGCTGGTCGCCAACCGCGGCGAAATCGCCTGCCGGGTGATGCGCACCGCCAAGGCCATGGGCCTGACCACTGTCGCCGTGCACAGCGCCaccgacc                               >  3:279337/1‑136 (MQ=255)                                                                                                                                gaagGAGCCGCGCCCATGAGCCGCCCCGCTTTGACCACCCTGCTGGTCGCCAACCGCGGCGAAATCGCCTGCCGGGTGATGCGCACCGCCAAGGCCATGGGCCTGACCACTGTCGCCGTGCACAGCGCCaccgacc                               <  4:279337/136‑1 (MQ=255)                                                                                                                                    gAGCCGCGCCCATGAGCCGCCCCGCTTTGACCACCCTGCTGGTCGCCAACCGCGGCGAAATCGCCTGCCGGGTGATGCGCACCGCCAAGGCCATGGGCCTGACCACTGt                                                      <  3:210977/109‑1 (MQ=255)                                                                                                                                    gAGCCGCGCCCATGAGCCGCCCCGCTTTGACCACCCTGCTGGTCGCCAACCGCGGCGAAATCGCCTGCCGGGTGATGCGCACCGCCAAGGCCATGGGCCTGACCACTGt                                                      >  4:210977/1‑109 (MQ=255)                                                                                                                                    gAGCCGCGCCCATGAGCCGCCCCGCTTTGACCACCCTGCTGGTCGCCAACCGCGGCGAAATCGCCTGCCGGGTGATGCGCACCGCCAAGGCCATGGGCCTGACCACTGTCGCCGTGCACAGCGCCACCGACCGTGACGCCCGTCACAGc              >  2:124670/1‑149 (MQ=255)                                                                                                                                       ccGCGCCCATGAGCCGCCCCGCTTTGACCACCCTGCTGGTCGCCAACCGCGGCGAAATCGCCTGCCGGGTGATGCGCACCGCCAAGGCCATGGGCCTGACCACTGTCGCCGTGCACAGCGCCACCGACCGTGACGCCCGTCACAGCcgc           <  4:191404/149‑1 (MQ=255)                                                                                                                                             ccATGAGCCGCCCCGCTTTGACCACCCTGCTGGTCGCCAACCGCGGCGAAATCGCCTGCCGGGTGATGCGCACCGCCAAGGc                                                                        >  8:226713/1‑82 (MQ=255)                                                                                                                                             ccATGAGCCGCCCCGCTTTGACCACCCTGCTGGTCGCCAACCGCGGCGAAATCGCCTGCCGGGTGATGCGCACCGCCAAGGc                                                                        <  7:226713/82‑1 (MQ=255)                                                                                                                                               aTGAGCCGCCCCGCTTTGACCACCCTGCTGGTCGCCAACCGCGGCGAAATCGCCTGCCGGGTGATGCGCACCGCCAAGGCCATGGGCCTGACCACTGTCGCCGTGCACAGCGCCACCGACCGTGACGCCCGTCACAGCCGCGAAGCCGa   >  5:143772/1‑149 (MQ=255)                                                                                                                                                tGAGCCGCCCCGCTTTGACCACCCTGCTGGTCGCCAACCGCGGCGAAATCGCCTGCCGGGTGATGCGCACCGCCAAGGCCATGGGCCTGACCACTGTCGCCGTGCACAGCGCCACCGACCGTGACGCCCGTCACAGCCGCGAAGCCGAc  <  8:223254/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                AACTCAGCCCGGCCCTGCGCCGTTACTGCGAAAACACCATCGCCCGTATCCGCGTCAGCGCCGAAGGCCAGGAGGGCCTGCGCGCTTTCCTGGAAAAACGCCGCCCTGCCTGGCAAACCGTTGACAAGAAGGAGCCGCGCCCATGAGCCGCCCCGCTTTGACCACCCTGCTGGTCGCCAACCGCGGCGAAATCGCCTGCCGGGTGATGCGCACCGCCAAGGCCATGGGCCTGACCACTGTCGCCGTGCACAGCGCCACCGACCGTGACGCCCGTCACAGCCGCGAAGCCGAC  >  NC_002947/4591600‑4591891

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.