New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4592540	27 (0.510)	3 (0.060)	3/240	NT	8.4%	coding (799/1953 nt)	mccA	methylcrotonyl‑CoA carboxylase biotin‑containing subunit alpha
	?	NC_002947	= 4592565	40 (0.800)					coding (824/1953 nt)	mccA	methylcrotonyl‑CoA carboxylase biotin‑containing subunit alpha

AGGTGTTCGCCGATCAGCACGGCAACTGCCTGTACCTCAACGAACGCGACTGTTCCATTCAGCGCCGCCATCAGAAGGTGGTGGAAGAGGCCCCTGCCCCCGGCCTGTCGCCCGAACTGCGCCGGGCCATGGGCGAAGCGGCGGTGCGTGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4592388‑4592540 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtgccgGCACCCACGTAACCGATAGCCTGGGCGGCACGCACCGCCGCTTCGCCCATGGCCCGGCGCAGTTCGGGCGACAGGCCGGGGGCAGGGGCCTCTTCCACCACCTTCTGATGGCGGCGCTGAATGGAACAGTCGCGTTCGTTGAG  <  NC_002947/4592565‑4592423                                                                                                                                                                                                                                                                                                          AGGTGTTCGCAGATCAGCACGGCAACTGCCTGTACCTCAACGAACGCGACTGTTCCATTCAGCGCCGCCATCAGAAGGTGGTGGAAGAGGCCCCTGCCCCCGGCCTGTCGCCCGAACTGCGCCGGGCCATGGGCGAAGCGGCGGTGCGT                                                                                                                                                     >  1:162424/1‑149                                       AACGAACGCGACTGTTCCATTCAGCGCCGCCATCAGAAGGTGGTGGAAGAGGCCCCTGCCCCCGGCCTGTCGCCCGAACTGCGCCGGGCCATGGGCGAAGCGGCGGTGCGTGCCGGCACCCACGTAACCGATAGCCTGGGCGGCACG                                                                                                                 <  4:34842/147‑1                                                   TGTTCCATTCAGCGCCGCCATCAGAAGGTGGTGGAAGAGGCCCCTGCCCCCGGCCTGTCGCCCGAACTGCGCCGGGCCATGGGCGAAGCGGCGGTGCGTGCCGGCACCCACGTAACCGATAGCCTGGGCGGCACGCAC                                                                                                              <  5:91665/138‑1                                                   TGTTCCATTCAGCGCCGCCATCAGAAGGTGGTGGAAGAGGCCCCTGCCCCCGGCCTGTCGCCCGAACTGCGCCGGGCCATGGGCGAAGCGGCGGTGCGTGCCGGCACCCACGTAACCGATAGCCTGGGCGGCACGCAC                                                                                                              >  6:91665/1‑138                                                                                                                                                    GTGCCGGCACCCACGTAACCGATAGCCTGGGCGGCACGCACCGCCGCTTCGCCCATGGCCCGGCGCAGTTCGGGTGACAGGCCGGGGGCAGGGGCCTCTTCCACCACCTTCTGATGGCGGCGCTGAATGGAACAGTCGCGTTCGTTGAG  <  7:322943/149‑1                                                                                                                                                    GTGCCGGCACCCACGTAACCGATAGCCTGGGCGGCACGCACCGCCGCTTCGCCCATGGCCCGGCGCAGTTCGGGCGACAGGCCGGGGGCAGGGGCCTCTTCCACCACCTTCTGATGGCGGCGCTGAATGGAACAGTCGCGTTCGTTGAG  <  6:256707/149‑1                                                                                                                                                                                                                                                                                                          AGGTGTTCGCCGATCAGCACGGCAACTGCCTGTACCTCAACGAACGCGACTGTTCCATTCAGCGCCGCCATCAGAAGGTGGTGGAAGAGGCCCCTGCCCCCGGCCTGTCGCCCGAACTGCGCCGGGCCATGGGCGAAGCGGCGGTGCGTGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4592388‑4592540 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtgccgGCACCCACGTAACCGATAGCCTGGGCGGCACGCACCGCCGCTTCGCCCATGGCCCGGCGCAGTTCGGGCGACAGGCCGGGGGCAGGGGCCTCTTCCACCACCTTCTGATGGCGGCGCTGAATGGAACAGTCGCGTTCGTTGAG  <  NC_002947/4592565‑4592423

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.