New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4722314 | 49 (0.930) | 4 (0.080) | 4/242 | NT | 7.5% | coding (1250/1905 nt) | htpG | chaperone protein HtpG |
? | NC_002947 | = 4722346 | 52 (1.030) | coding (1218/1905 nt) | htpG | chaperone protein HtpG |
AGTGAGCAGCAGCACTTCGATGCCTTTCTTGCGGAAGACTTCCAGGTGCGGGCTGTTCTTGACCTGCGCGTACGACTCGCCGGTGAGATAGTAGATCTTGTCCTGACCTTCCTTGGCGCGGGCCAGGTAGTCGGCCAGGGCGACGCTCTGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4722163‑4722314 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tctgctGCGCTTTGCGTCCACCCAGGACGACAGCGGCGAGCAGAG < NC_002947/4722346‑4722308 AGTGAGCAGCAGCACTTCGATGCCTTTCTTGCGGAAGACTTCCAGGTGCGGGCTGTTCTTGACCTGCGCGTACGACTCCCCGGTGAGATAGTAGATCTTGTCCTGACCTTCCTTGGCGCGGGCCAGGTAGTCGGCCAGGGCGACGCTC < 3:170571/148‑1 GGAAGACTTCCAGGTGCGGGCTGTTCTTGACCTGCGCGTACGACTCGCCGGTGAGATAGTAGATCTTGTCCTGACCTTCCTTGGCGCGGGCCAGGTAGTCGGCCAGGGCGACGCTCTGCTGCGCTTTGCGTCCACCCAGGACGACAGCG > 6:336508/1‑149 CAGGTGCGGGCTGTTCTTGACCTGCGCGTACGACTCGCCGGTGAGATAGTAGATCTTGTCCTGACCTTCCTTGGCGCGGGCCAGGTAGTCGGCCAGGGCGACGCTCTGCTGCGCTTTGCGTCCACCCAGGACGACAGCGGCGAGCAGA < 5:336508/148‑1 TGTTCTTGACCTGCGCGTACGACTCGCCGGTGAGATAGTAGATCTTGTCCTGACCTTCCTTGGCGCGGGCCAGGTAGTCGGCCAGGGCGACGCTCTGCTGCGCTTTGCGTCCACCCAGGACGACAGCGGCGAGCAGAG > 7:61834/1‑138 TGTTCTTGACCTGCGCGTACGACTCGCCGGTGAGATAGTAGATCTTGTCCTGACCTTCCTTGGCGCGGGCCAGGTAGTCGGCCAGGGCGACGCTCTGCTGCGCTTTGCGTCCACCCAGGACGACAGCGGCGAGCAGAG < 8:61834/138‑1 AGTGAGCAGCAGCACTTCGATGCCTTTCTTGCGGAAGACTTCCAGGTGCGGGCTGTTCTTGACCTGCGCGTACGACTCGCCGGTGAGATAGTAGATCTTGTCCTGACCTTCCTTGGCGCGGGCCAGGTAGTCGGCCAGGGCGACGCTCTGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4722163‑4722314 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tctgctGCGCTTTGCGTCCACCCAGGACGACAGCGGCGAGCAGAG < NC_002947/4722346‑4722308 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |