New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4722314	49 (0.930)	4 (0.080)	4/242	NT	7.5%	coding (1250/1905 nt)	htpG	chaperone protein HtpG
	?	NC_002947	= 4722346	52 (1.030)					coding (1218/1905 nt)	htpG	chaperone protein HtpG

GCAGCACTTCGATGCCTTTCTTGCGGAAGACTTCCAGGTGCGGGCTGTTCTTGACCTGCGCGTACGACTCGCCGGTGAGATAGTAGATCTTGTCCTGACCTTCCTTGGCGCGGGCCAGGTAGTCGGCCAGGGCGACGCTCTGCTCGCCGCTGTCGTCCTGGGTGGACGCAAAGCGCAGCAGACCGGC‑GATTTTCTCCTTGTTGGCGAAGTCTTCGGCCGGGCCCTCTTTCAGCACCTGACCGAAGTTTTTCCAGAAGCCCTTGTATTTCTCGGGTTCGTTCTTCGCCAGC  >  NC_002947/4722171‑4722460                                                                                                                                                |                                                                                                                                                    gcagcaCTTCGATGCCTTTCTTGCGGAAGACTTCCAGGTGCGGGCTGTTCTTGACCTGCGCGTACGACTCGCCGGTGAGATAGTAGATCTTGTCCTGACCTTCCTTGGCGCGGGCCAGGTAGTCGGCCAGGGCGACGCTCTGCTcgccg                                                                                                                                                >  5:197405/1‑149 (MQ=255)   agcaCTTCGATGCCTTTCTTGCGGAAGACTTCCAGGTGCGGGCTGTTCTTGACCTGCGCGTACGACTCGCCGGTGAGATAGTAGATCTTGTCCTGACCTTCCTTGGCGCGGGCCAGGTAGTCGGCCAGGGCGACGCTCTGCTCGCCGCt                                                                                                                                              >  6:133194/1‑149 (MQ=255)      aCTTCGATGCCTTTCTTGCGGAAGACTTCCAGGTGCGGGCTGTTCTTGACCTGCGCGTACGACTCGCCGGTGAGATAGTAGATCTTGTCCTGACCTTCCTTGGCGCGGGCCAGGTAGTCGGCCAGGGCGACGCTCTGCTCGCCGCTgtc                                                                                                                                           <  8:60666/149‑1 (MQ=255)           gATGCCTTTCTTGCGGAAGACTTCCAGGTGCGGGCTGTTCTTGACCTGCGCGTACGACTAGCCGGTGAGATAGTAGATCTTGTCCTGACATTCCTTGGCGCGGGCCAGGTAGTCGGCCAGGGCGACGCTCTGCTCGCCGCTGTCGTCCt                                                                                                                                      >  1:26753/1‑149 (MQ=255)               ccTTTCTTGCGGAAGACTTCCAGGTGCGGGCTGTTCTTGACCTGCGCGTACGACTCGCCGGTGAGATAGTAGATCTTGTCCTGACCTTCCTTGGCGCGGGCCAGGTAGTCGGCCAGGGCGACGCTCTGCTCGCCGCTGTCGTCCTGGGt                                                                                                                                  <  1:89161/149‑1 (MQ=255)                         ggAAGACTTCCAGGTGCGGGCTGTTCTTGACCTGCGCGTACGACTCGCCGGTGAGATAGTAGATCTTGTCCTGACCTTCCTTGGCGCGGGCCAGGTAGTCGGCCAGGGCGACGCTCTGCTgcgctttgcgtccacccaggacgacagcg                                                                                                                        >  6:336508‑M1/1‑120 (MQ=255)                         ggAAGACTTCCAGGTGCGGGCTGTTCTTGACCTGAGCGTACGACTCGCCGGTGAGATAGTAGATCTTGTCCTGACCATCCTTGGCGCGGGCCAGGAAGTCGGCCAGGGCGACGCTCTGCTCGCCGCTGTCGTCCTGCGTGGACGCAAAg                                                                                                                        >  1:346717/1‑149 (MQ=255)                         ggAAGACTACCAGGTGCGGGCTGTTCTTGACCTGCGCGTACGACTCGCCGGTGAGATAGTAGATCTTGTCCTGACCTTCCTTGGCGCGGGCCAGGTAGTCGGCCAGGGCGACGCTCTGCTCGCCGCTGTCGTCCTgg                                                                                                                                    <  4:269879/137‑1 (MQ=255)                         ggAAGACTACCAGGTGCGGGCTGTTCTTGACCTGCGCGTACGACTCGCCGGTGAGATAGTAGATCTTGTCCTGACCTTCCTTGGCGCGGGCCAGGTAGTCGGCCAGGGCGACGCTCTGCTCGCCGCTGTCGTCCTgg                                                                                                                                    >  3:269879/1‑137 (MQ=255)                                   cAGGTGCGGGCTGTTCTTGACCTGCGCGTACGACTCGCCGGTGAGATAGTAGATCTTGTCCTGACCTTCCTTGGCGCGGGCCAGGTAGTCGGCCAGGGCGACGCTCTGCTgcgctttgcgtccacccaggacgacagcggcgagcaga                                                                                                               <  5:336508‑M1/148‑39 (MQ=255)                                     ggTGCGGGCTGTTCTTGACCTGCGCGTACGACTCGCCGGTGAGATAGTAGATCTTGTCCTGACCTTCCTTGGCGCGGGCCAGGTAGTCGGCCAGGGCGACGCTCTGCTCGCCGCTGTCGTCCTg                                                                                                                                     >  5:176410/1‑124 (MQ=255)                                     ggTGCGGGCTGTTCTTGACCTGCGCGTACGACTCGCCGGTGAGATAGTAGATCTTGTCCTGACCTTCCTTGGCGCGGGCCAGGTAGTCGGCCAGGGCGACGCTCTGCTCGCCGCTGTCGTCCTg                                                                                                                                     <  6:176410/124‑1 (MQ=255)                                           ggCTGTTCTTGACCTGGGCGTACGACTCGCCGGTGAGATAGTAGATCTTGTCCTGACCTTCCTTGGCGCGGGCCAGGTAGTCGGCCAGGGCGACGCTCTGCTCGCCGCTGTCGTCCTGGGTGGACGCAAAGCGCAGCAGACCGGc                                                                                                          <  3:40226/145‑1 (MQ=255)                                           ggCTGTTCTTGACCTGGGCGTACGACTCGCCGGTGAGATAGTAGATCTTGTCCTGACCTTCCTTGGCGCGGGCCAGGTAGTCGGCCAGGGCGACGCTCTGCTCGCCGCTGTCGTCCTGGGTGGACGCAAAGCGCAGCAGACCGGc                                                                                                          >  4:40226/1‑145 (MQ=255)                                              tGTTCTTGACCTGCGCGTACGACTCGCCGGTGAGATAGTAGATCTTGTCCTGACCTTCCTTGGCGCGGGCCAGGTAGTCGGCCAGGGCGACGCTCTGCTgcgctttgcgtccacccaggacgacagcggcgagcagag                                                                                                              <  8:61834‑M1/138‑40 (MQ=255)                                              tGTTCTTGACCTGCGCGTACGACTCGCCGGTGAGATAGTAGATCTTGTCCTGACCTTCCTTGGCGCGGGCCAGGTAGTCGGCCAGGGCGACGCTCTGCTgcgctttgcgtccacccaggacgacagcggcgagcagag                                                                                                              >  7:61834‑M1/1‑99 (MQ=255)                                              tGTTCTTGACCTGCGCGTACGACTCGCCGGTGAGATAGTAGATCTTGTCCTGACCTTCCTTGGCGCGGGCCAGGTAGTCGGCCAGGGCGACGCTCTGCTCGCCGCTGTCGTCCTGGGTGGACGCAAAGCGCAGCAGACCGGC‑GATTTtc                                                                                                  >  3:120325/1‑149 (MQ=255)                                                               tACGACTCGCCGGTGAGATAGTAGATATTGTCCTGACATTCCTTGGCGAGGGCCAGGTAGTCGTCCAGGGAGACGCTCTGCTCGCCGCTGTCGTCATGGGTGGACGCAAAGCGCAGCAGACCGGC‑GATTTTCTCCTTGTTGGCGAAGTc                                                                                 >  7:180278/1‑149 (MQ=255)                                                                  gACTCGCCGGTGAGATAGTAGATCTTGTCCTGACCTTCCTTGGCGCGGGCCAGGTAGTCGGCCAGGGCGACGCTCTGCTCGCCGCTGTCGTCCTGGGTGGACGCAAAGCGCAGCAGACCGGC‑GATTTTCTCCttgttg                                                                                         >  2:296805/1‑138 (MQ=255)                                                                  gACTCGCCGGTGAGATAGTAGATCTTGTCCTGACCTTCCTTGGCGCGGGCCAGGTAGTCGGCCAGGGCGACGCTCTGCTCGCCGCTGTCGTCCTGGGTGGACGCAAAGCGCAGCAGACCGGC‑GATTTTCTCCttgttg                                                                                         <  1:296805/138‑1 (MQ=255)                                                                  gACTCGCCGGTGAGATAGTAGATCTTGTCCTGACCTTCCTTGGCGCGGGCCAGGTAGTCGGCCAGGGCGACGCTCTGCTCGCCGCTGTCGTCCTGGGTGGACGCAAAGCGCAGCAGACCGGC‑GATTTTCTCCTTGTTGGCGAAGTCTTc                                                                              >  2:301125/1‑149 (MQ=255)                                                                        cgggTGAGATAGTAGTTCTTGTCCTGACCTTCCTTGGGGGGGGCCAGGTAGTCGGCCAGGGCGACTCTCTGCTCGCCGGTGTCGTCCTGGGTGGACGCAAAGCGCAGCATACCGGA‑GATTTTGTCCTTGTTGGCGAAGTCTTCGGCCgg                                                                        <  2:346717/147‑1 (MQ=255)                                                                               gaTAGTAGATCTTGTCCTGACCTTCCTTGGCGCGGGCCAGGTAGTCGGCCAGGGCGACGCTCTGCTCGCCGCTGTCGTCCTGGGTGGACGCAAAGCGCAGCAGACCGGC‑GATTTTCTCCTTGTTGGCGAAGTCTTCg                                                                             <  6:226153/137‑1 (MQ=255)                                                                               gaTAGTAGATCTTGTCCTGACCTTCCTTGGCGCGGGCCAGGTAGTCGGCCAGGGCGACGCTCTGCTCGCCGCTGTCGTCCTGGGTGGACGCAAAGCGCAGCAGACCGGC‑GATTTTCTCCTTGTTGGCGAAGTCTTCg                                                                             >  5:226153/1‑137 (MQ=255)                                                                                  agtagATCTTGTCCTGACCTTCCTTGGCGCGGGCCAGGTAGTCGGCCAGGGCGACGCTCTGCTCGCCGCTGTCGTCCTGGGTGGACGCAAAGCGCAGCAGACCGGC‑GATTTTCTCCTTGTTGGCGAAGTCTTCGGCCGGGCCCTCttt                                                               >  8:109902/1‑148 (MQ=255)                                                                                   gtagATCTTGTCCTGACCTTCCTTGGCGCGGGCCAGGTAGTCGGCCAGGGCGACGCTCTGCTCGCCGCTGTCGTCCTGGGTGGACGCAAAGCGCAGCAGACCGGC‑GATTTTCTCCTTGTTGGCGAAGTCTTCGGCCGGGCCCTCTTTCa                                                             <  6:197405/149‑1 (MQ=255)                                                                                    tagATCTTGTCCTGACCTTCCTTGGCGCGGGCCAGGTAGTCGGCCAGGGCGACGCTCTGCTCGCCGCTGTCGTCCTGGGTGGACGCAAAGCGCAGCAGACCGGCAGATTTTCTCCTTGTTGGCGAAGTCTTCGGCCGGGCCCTCTTTCa                                                             <  1:248655/149‑1 (MQ=255)                                                                                    tagATCTTGTCCTGACCTTCCTTGGCGCGGGCCAGGTAGTCGGCCAGGGCGACGCTCTGCTCGCCGCTGTCGTCCTGGGTGGACGCAAAGCGCAGCAGACCGGC‑GATTTTCTCCTTGTTGGCGAAGTCTTCGGCCGGGCCCTCttt                                                               >  2:248655/1‑146 (MQ=255)                                                                                             tCCTGACCTTCCTTGGCGCGGGCCAGGTAGTCGGCCAGGGCGACGCTCTGCTCGCCGCTGTCGTCCTGGGTGGACGCAAAGCGCAGCAGACCGGC‑GATTTTCTCCTTGTTGGCGAAGTCTTCGGCCGGGCCCTCTTTCAGCACCTGAc                                                    >  7:172260/1‑148 (MQ=255)                                                                                             tCCTGACCTTCCTTGGCGCGGGCCAGGTAGTCGGCCAGGGCGACGCTCTGCTCGCCGCTGTCGTCCTGGGTGGACGCAAAGCGCAGCAGACCGGC‑GATTTTCTCCTTGTTGGCGAAGTCTTCGGCCGGGCCCTCTTTCAGCACCTGAc                                                    <  8:172260/148‑1 (MQ=255)                                                                                             tCCTGACCTTCCTTGGCGCGGGCCAGGTAGTCGGCCAGGGCGACGCTCTGCTCGCCGCTGTCGTCCTGGGTGGACGCAAAGCGCACCAGACCGGC‑GATTTTCTCCTTGATGGCGAAGTCTTCGGCCGGGCCCTCTTTCAGCACCTGAcc                                                   >  7:153397/1‑149 (MQ=255)                                                                                              ccTGACCTTCCTTGGCGCGGGCCAGGTAGTCGGCCAGGGCGACGCTCTGCTCGCCGCTGTCGTCCTGGGTGGACGCAAAGCGCAGCAGACCGGC‑GATTTTCTCCTTGTTGGCGAAGTCTTCGGCCGGGCCCTCTTTCAGCACCTGAcc                                                   >  8:109701/1‑148 (MQ=255)                                                                                                  aCCTTCCTTGGCGCGGGCCAGGTAGTCGGCCAGGGCGACGCTCTGCTCGCCGCTGTCGTCCTGGGTGGACGCAAAGCGCAGCAGACCGGC‑GATTTTCTCCTTGTTGGCGAAGTCTTCGGCCGGGCCCTCTTTCAGCACCTGACCGaa                                                <  4:120325/147‑1 (MQ=255)                                                                                                       gcttGGCTGGGGCCAGGTAGTCGGCAAGGGCGACGCTCTGCTCGCCGATGTAGTCCTGTTTGTACGCAAAGCTCAGCAGACCGGC‑GATTTTCTCCTTGTTGGCGAAGTCTTCTGCCGTGCCCTCTTTCAGCACCTGACCTAAGtttt                                           <  8:180278/146‑1 (MQ=255)                                                                                                        cttGGCGCGGGCCAGGTAGTCGGCCAGGGCGACGCTCTGCTCGCCGCTGTCGTCCTGGGTGGACGCAAAGCGCAGCAGACCGGC‑GATTTTCTCCTTGTTGGCGAAGTCTTCGGCCGGGCCCTCTTTCAGCACCTGACCGAAATTTTTc                                         >  5:329032/1‑148 (MQ=255)                                                                                                         ttGGCGCGGGCCAGGTAGTCGGCCAGGGCGACGCTCTGCTCGCCGCTGTCGTCCTGGGTGGACGCAAAGCGCAGCAGACCGGC‑GATTTTCTCCTTGTTGGCGAAGTCTTCGGCCGGGCCCTCTTTCAGCACCTGACCGAAGTTTTTc                                         >  6:155092/1‑147 (MQ=255)                                                                                                           ggCGCGGGCCAGGTAGTCGGCCAGGGCGACGCTCTGCTCGCCGCTGTCGTCCTGGGTGGACGCAAAGCGCAGCAGACCGGC‑GATTTTCTCCTTGTTGGCGAAGTCTTCGGCCGGGCCCTCTTTCAGCACCTGACCGAAGTTTTTCCa                                       <  5:133194/147‑1 (MQ=255)                                                                                                                   ccAGGTAGTCGGCCAGGGCGACGCTCTGCTCGCCGCTGTCGTCCTGGGTGGACGCAAAGCGCAGCAGACCGGC‑GATTTTCTCCTTGTTGGCGAAGTCTTCGGCCGGGCCCTCTTTCAGCACCTGACCGAAGTTTTTCCAGAAGCCCTTg                             >  2:335611/1‑149 (MQ=255)                                                                                                                      ggTAGTCGGCCAGGGCGACGCTCTGCTCGCCGCTGTCGTCCTGGGTGGACGCAAAGCGCAGCAGACCGGC‑GATTTTCTCCTTGTTGGCGAAGTCTTCGGCCGGGCCCTCTTTCAGCACCTGACCGAAGTTTTTcc                                        <  3:193888/135‑1 (MQ=255)                                                                                                                      ggTAGTCGGCCAGGGCGACGCTCTGCTCGCCGCTGTCGTCCTGGGTGGACGCAAAGCGCAGCAGACCGGC‑GATTTTCTCCTTGTTGGCGAAGTCTTCGGCCGGGCCCTCTTTCAGCACCTGACCGAAGTTTTTcc                                        >  4:193888/1‑135 (MQ=255)                                                                                                                       gTAGTCGGCCAGGGCGACGCTCTGCTCGCCGCTGTCGTCCTGGGTGGACGCAAAGCGCAGCAGACCGGC‑GATTTTCTCCTTGTTGGCGAAGTCTTCGGCCGGGCCCTCTTTCa                                                             <  7:204712/113‑1 (MQ=255)                                                                                                                       gTAGTCGGCCAGGGCGACGCTCTGCTCGCCGCTGTCGTCCTGGGTGGACGCAAAGCGCAGCAGACCGGC‑GATTTTCTCCTTGTTGGCGAAGTCTTCGGCCGGGCCCTCTTTCa                                                             >  8:204712/1‑113 (MQ=255)                                                                                                                          gTCGGCCAGGGCGACGCTCTGCTCGCCGCTGTCGTCCTGGGTGGACGCAAAGCGCAGCAGACCGGC‑GATTTTCTCCTTGTTGGCGAAGTCTTCGGCCGGGCCCTCTTTCAGCACCTGACCGAAGTTTTTCCAGAAGCCCTTGTATTtc                       <  2:26753/148‑1 (MQ=255)                                                                                                                             ggCCAGGGCGACGCTCTGCTCGCCGCTGTCGTCCTGGGTGGACGCAAAGCGCAGCAGACCGGC‑GATTTTCTCCTTGTTGGCGAAGTCTTCGGCCGGGCCCTCTTTCAGCACCTGACCGAAGTTTTTCCAGAAGCCCTTGTATTTCTCgg                   <  7:109701/149‑1 (MQ=255)                                                                                                                              gCCAGGGCGACGCTCTGCTCGCCGCTGTCGTCCTGGGTGGACGCAAAGCGCAGCAGACCGGC‑GATTTTCTCCTTGTTGGCGAAGTCTTCGGCCGGGCCCTCTTTCAGCACCTGACCGAAGttttt                                          <  3:322338/125‑1 (MQ=255)                                                                                                                              gCCAGGGCGACGCTCTGCTCGCCGCTGTCGTCCTGGGTGGACGCAAAGCGCAGCAGACCGGC‑GATTTTCTCCTTGTTGGCGAAGTCTTCGGCCGGGCCCTCTTTCAGCACCTGACCGAAGttttt                                          >  4:322338/1‑125 (MQ=255)                                                                                                                                  gggCGACGCTCTGCTCGCCGCTGTCGTCCTGGGTGGACGCAAAGCGCAGCAGACCGGC‑GATTTTCTCCTTGTTGGCGAAGTCTTCGGCCGGGCCCTCTTTCAGCACCTGACCGAAGTTTTTCCAGAAGCCCTTGTATTTCTCGGgttcg              <  5:155092/149‑1 (MQ=255)                                                                                                                                       aCGCTCTGCTCGCCGCTGTCGTCCTGGGTGGACGCAAAGCGCAGCAGACCGGC‑GATTTTCTCCTTGTTGGCGAAGTCTTCGGCCGGGCCCTCTTTCAGCACCTGACCGAAGTTTTTCCAGAAGCCCTTGTATTTCTCGGGTTCGttctt         <  1:301125/149‑1 (MQ=255)                                                                                                                                        cGCTCTGCTCGCCGCTGTCGTCCTGGGTGGACGCAAAGCGCAGCAGACCGGC‑GATTTTCTCCTTGTTGGCGAAGTCTTCGGCCGGGCCCTCTTTCAGCACCTGACCGAACTTTTTCCAGAAGCCCTTGTATTTCTCGGGTTCGttcttc        <  6:329032/149‑1 (MQ=255)                                                                                                                                         gCTCTGCTCGCCGCTGTCGTCCTGGGTGGACGCAAAGCGCAGCAGACCGGC‑GATTTTCTCCTTGTTGGCGAAGTTTTCGGCCGGGCCCTCTTTCAGCACCTGACCGAAGTTTTTCCAGAAGCCCTTg                             <  1:91419/127‑1 (MQ=255)                                                                                                                                         gCTCTGCTCGCCGCTGTCGTCCTGGGTGGACGCAAAGCGCAGCAGACCGGC‑GATTTTCTCCTTGTTGGCGAAGTCTTCGGCCGGGCCCTCTTTCAGCACCTGACCGAAGTTTTTCCAGAAGCCCTTGTATTTCTCGGGTTCGTTCTTCg       >  5:64608/1‑149 (MQ=255)                                                                                                                                         gCTCTGCTCGCCGCTGTCGACCTGGGAGGACGCAAAGCGCAGCAGACCGGC‑GATTTTCTCCTTGTTGGCGAAGTCTTCGGCCGGGCCCTCTTACAGCACCTCACCGAAGTATTTCCAGAAGCCCTTg                             >  2:91419/1‑127 (MQ=255)                                                                                                                                          ctctGCTCGCCGCTGTCGTCCTGGGTGGACGCAAAGCGCagcagagcgtcgccctggccgactacctggcccgcgccaaggaaggtcaggacaagatctactatctcaccggcgagtcgtacgcgcaggtcaagaaca                  <  8:61834‑M2/138‑100 (MQ=255)                                                                                                                                          ctctGCTCGCCGCTGTCGTCCTGGGTGGACGCAAAGCGCagcagagcgtcgccctggccgactacctggcccgcgccaaggaaggtcaggacaagatctactatctcaccggcgagtcgtacgcgcaggtcaagaaca                  >  7:61834‑M2/1‑39 (MQ=255)                                                                                                                                           tctGCTCGCCGCTGTCGTCCTGGGTGGACGCAAAGCGCagcagagcgtcgccctggccgactacctggcccgcgccaaggaaggtcaggacaagatctactatctcaccggcgagtcgtacgcgcaggtcaagaacagcccgcacctg       <  5:336508‑M2/148‑111 (MQ=255)                                                                                                                                           tctGCTCGCCGCTGTCGTCCTGGGTGGACGCAAAGCGCAGCAGACCGGC‑GATTTTCTCCTTGTTGGCGAAGTCTTCGGCCGGGCCCTCTTTCAGCACCTGACCGAAGTTTTTCCAGAAGccc                                >  6:248047/1‑122 (MQ=255)                                                                                                                                           tctGCTCGCCGCTGTCGTCCTGGGTGGACGCAAAGCGCAGCAGACCGGC‑GATTTTCTCCTTGTTGGCGAAGTCTTCGGCCGGGCCCTCTTTCAGCACCTGACCGAAGTTTTTCCAGAAGccc                                <  5:248047/122‑1 (MQ=255)                                                                                                                                               cTCGCCGCTGTCGTCCTGGGTGGACGCAAAGCGCAGCAGACCGGC‑GATTTTCTCCTTGTTGGCGAAGTCTTCGGCCGGGCCCTCTTTCAGCACCTGACCGAAGTTTTTCCAGAAGCCCTTGTATTTCTCGGGTTCGTTCTTCGCCAGc  <  6:64608/148‑1 (MQ=255)                                                                                                                                                |                                                                                                                                                    GCAGCACTTCGATGCCTTTCTTGCGGAAGACTTCCAGGTGCGGGCTGTTCTTGACCTGCGCGTACGACTCGCCGGTGAGATAGTAGATCTTGTCCTGACCTTCCTTGGCGCGGGCCAGGTAGTCGGCCAGGGCGACGCTCTGCTCGCCGCTGTCGTCCTGGGTGGACGCAAAGCGCAGCAGACCGGC‑GATTTTCTCCTTGTTGGCGAAGTCTTCGGCCGGGCCCTCTTTCAGCACCTGACCGAAGTTTTTCCAGAAGCCCTTGTATTTCTCGGGTTCGTTCTTCGCCAGC  >  NC_002947/4722171‑4722460

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.