| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4734978 = | 32 (0.610) | 5 (0.100) | 5/240 | NT | 12.5% | coding (657/2832 nt) | sucA | 2‑oxoglutarate dehydrogenase subunit E1 |
| ? | NC_002947 | 4735020 = | 40 (0.800) | coding (615/2832 nt) | sucA | 2‑oxoglutarate dehydrogenase subunit E1 | |||||
TTGTCGCACCATTGGCGCCGAATTCACCCACATCGTCGATTCCGAGCAGCGCAGCTGGTTCCAGCAGCGCCTGGAAAGCGTGCGCGGCCGTCCGGAGTATTCCGCTGACGTGCAGGCCCACCTGCTCGAGCGCGTAACCGCCGGTGAGGGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4735131‑4734978‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcctgCACGTCAGCGGAATACTCCGGACGGCCGCGCACGCTTTCCAGGCGCTGCTGGAACCAGCTGCGCTGCTCGGAATCGACGATGTGGGTGAATTCGGCGCCAATGGTGCGACAATATGTCTTCTGGAGTGCATCGAAGATGTCGCGTA > NC_002947/4735020‑4735165 TTGTCGCACCATTGGCGCCGAATTCACCCACATCGTCGATTCCGAGCAGCGCAGCTGGTTCCAGCAGCGCCTGGAAAGCGTGCGCGGCCGTCCGGAGTATTCCGCTGACGTGCAGGCCCACCTGCTCGAGCGCGTAACCGCCGGTGAGG < 3:125754/149‑1TTGTCGCACCATTGGCGCCGAATTCACCCACATCGTCGATTCCGAGCAGCGCAGCTGGTTCCAGCAGCGCCTGGAAAGCGTGCGCGGCCGTCCGGAGTATTCCGCTGACGTGCAGGCCCACCTGCTCGAGCGCGTAACCGCCGGTGAG < 1:56189/148‑1 GTCGCACCATTGGCGCCGAATTCACCCACATCGTCGATTCCGAGCAGCGCAGCTGGTTCCAGCAGCGCCTGGAAAGCGTGCGCGGCCGTCCGGAGTATTCCGCTGACGTGCAGGCCCACCTGCTCGAGCGCGTAACCGCCGGTGAGGGC > 3:336446/1‑149 TCGCACCATTGGCGCCGAATTCACCCACATCGTCGATTCCGAGCAGCGCAGCTGGTTCCAGCAGCGCCTGGAAAGCGTGCGCGGCCGTCCGGAGTATTCCGCTGACGTGCAGGCCCACCTGCTCGAGCGCGTAACCGCCGGTGAGGGC < 1:82915/148‑1 TCGCACCATTGGCGCCGAATTCACCCACATCGTCGATTCCGAGCAGCGCAGCTGGTTCCAGCAGCGCCTGGAAAGCGTGCGCGGCCGTCCGGAGTATTCCGCTGACGTGCAGGCCCACCTGCTCGAGCGCGTAACCGCCGGTGAGGGC < 4:59904/148‑1 CCACATCGTCGATTCCGAGCAGCGCAGCTGGTTCCAGCAGCGCCTGGAAAGCGTGCGCGGCCGTCCGGAGTATTCCGCTGACGTGCAGGCCCACCTGCTCGAGCGCGTAACCGCCGGTGAGGGCC > 7:323938/1‑125 CCACATCGTCGATTCCGAGCAGCGCAGCTGGTTCCAGCAGCGCCTGGAAAGCGTGCGCGGCCGTCCGGAGTATTCCGCTGACGTGCAGGCCCACCTGCTCGAGCGCGTAACCGCCGGTGAGGGCC < 8:323938/125‑1 TGACGTGCAGGCCCCCCTGCTCGAGCGCGTAACCGCCGGTGAGGGCCTGCACGTCAGCGGAATACTCCGGACGGCCGCGCACGCTTTCCAGGCGCTGCTGGAACCAGCTGCGCTGCTCGGAATCGACGATGTGGGTGAATTCGGCGCC > 5:62036/1‑148 GCAGGCCCACCTGCTCGAGCGCGTAACCGCCGGTGAGGGCCTGCACGTCAGCGGAATACTCCGGACGGCCGCGCACGCTTTCCAGGCGCTGCTGGAACCAGCTGCGCTGCTCGGAATCGACGATGTGGGTGAATTCGGCG < 1:320899/140‑1 GCAGGCCCACCTGCTCGAGCGCGTAACCGCCGGTGAGGGCCTGCACGTCAGCGGAATACTCCGGACGGCCGCGCACGCTTTCCAGGCGCTGCTGGAACCAGCTGCGCTGCTCGGAATCGACGATGTGGGTGAATTCGGCG > 2:320899/1‑140 CAGGCCCACCTGCTCGAGCGCGTAACCGCCGGTGAGGGCCTGCACGTCAGCGGAATACTCCGGACGGCCGCGCACGCTTTCCAGGCGCTGCTGGAACCAGCTGCGCTGCTCGGAATCGACGATGTGGGTGAATTCGGCGCCAATGGTGC > 1:194831/1‑149 CACCTGCTCGAGCGCGTAACCGCCGGTGAGGGCCTGCACGTCAGCGGAATACTCCGGACGGCCGCGCACGCTTTCCAGGCGCTGCTGGAACCAGCTGCGCTGCTCGGAATCGACGATGTGGGTGAATTCGGCGCCAATGGTGCGACAAT < 2:194831/149‑1 CTGCACGTCAGCGGAATACTCCGGACGGCCGCGCACGCTTTCCAGGCGCTGCTGGAACCAGCTGCGCTGCTCGGAATCGACGATGTGGGTGAATTCGGCGCCAATGGTGCGACAATATGTGTTCTGGAGTGCATCGAAGATGTCGCGTA < 3:59904/149‑1 TTGTCGCACCATTGGCGCCGAATTCACCCACATCGTCGATTCCGAGCAGCGCAGCTGGTTCCAGCAGCGCCTGGAAAGCGTGCGCGGCCGTCCGGAGTATTCCGCTGACGTGCAGGCCCACCTGCTCGAGCGCGTAACCGCCGGTGAGGGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4735131‑4734978‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcctgCACGTCAGCGGAATACTCCGGACGGCCGCGCACGCTTTCCAGGCGCTGCTGGAACCAGCTGCGCTGCTCGGAATCGACGATGTGGGTGAATTCGGCGCCAATGGTGCGACAATATGTCTTCTGGAGTGCATCGAAGATGTCGCGTA > NC_002947/4735020‑4735165 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |