New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4734978 =	32 (0.610)	5 (0.100)	5/240	NT	12.5%	coding (657/2832 nt)	sucA	2‑oxoglutarate dehydrogenase subunit E1
	?	NC_002947	4735020 =	40 (0.800)					coding (615/2832 nt)	sucA	2‑oxoglutarate dehydrogenase subunit E1

CCACGGTGGGCCATGCCGATCACGACCTCCTTGGCGCCGTAAGAGCCGGAACGCTGGATCATTTCATCCAGCATCGGAATCAGGCTCTCGCCGCCTTCAAGGCCGAATCGCTTGGTGCCCGGGTACTTGGTGCCCAGGTACTTTTCCAGGCCCTCACCGGCGGTTACGC‑GCTCGAGCAGGTGGGCCTGCACGTCAGCGGAATACTCCGGACGGCCGCGCACGCTTTCCAGGCGCTGCTGGAACCAGCTGCGCTGCTCGGAATCGACGATGTGGGTGAATTCG  >  NC_002947/4734832‑4735113                                                                                                                                                   |                                                                                                                                         tacgcgacatcttcgatgcactccagaacacatattgtcgcaccattggcgccgaattcacccacatcgtcgattccgagcagcgcagctggttccagcagcgcctggaaagcgtgcgcggccgtccggagtattccgctgacgtgCAg                                                                                                                                        <  3:59904‑M1/3‑1 (MQ=255)    cGGTGGGCCATGCCGATCACGACCTCCTTGGCGCCGTAAGAGCCGGAACGCTGGATCATTTCATCCAGCATCGGAATCAGGCTCTCGCCGCCTTCAAGGCCGAATCGCTTGGTGCCCGGGTACTTGGTGCCCAGGTACTTTTCCAGGcc                                                                                                                                     <  4:344270/149‑1 (MQ=255)                ccGATCACGACCTCCTTGGCGCCGTAAGAGCCGGAACGCTGGATCATTTCATCCAGCATCGGAATCAGGCTCTCGCCGCCTTCAAGGCCGAATCGCTTGGTGCCCGGGTACTTGGTGCCCAGGTACTTTTCCAGGCCCTCACCGGCGGt                                                                                                                         <  4:346508/149‑1 (MQ=255)                       cGACCTCCTTGGCGCCGTAAGAGCCGGAACGCTGGATCATTTCATCCAGCATCGGAATCAGGCTCTCGCCGCCTTCAAGGCCGAATCGCTTGGTGCCCGGGTACTTGGTGCCCAGGTACTTTTCCAGGCCCTCACCGGCGGTTACgc‑gc                                                                                                                 >  1:154880/1‑149 (MQ=255)                        gACCTCCTTGGCGCCGTAATAGCCGGAAAGCTGGATCATTTCATCCATCATCGGAATCAGGCTCTCGCCGCCTTCAAGGCCGTATCGCTTGGTGCCCGGGTACTTGGTGCCCAGGTACTTTTCCAGGCCCTCACcggcg                                                                                                                           <  2:121206/139‑1 (MQ=255)                        gACCTCCTTGGCGCCGTAAGAGCCGGAACGCTGGATCATTTCATCCAGCATCGGAATCAGGCTCTCGCCGCCTTCAAGGCCGAATCGCTTGGTGCCCGGGTACTTGGTGCCCAGGTACTTTTCCAGGCCCTCACCGGCGGTTACGC‑GCt                                                                                                                >  2:108314/1‑149 (MQ=255)                                 ggCGCCGTAAGAGCCGGAACGCTGGATCATTTCATCCAGCATCGGAATCAGGCTCTCGCCGCCTTCAAGGCCGAATCGCTTGGTGCCCGGGTACTTGGTGCCCAGGTACTTTTCCAGGCCCTCACCGGCGGTTACGC‑GCTCGAGCAgg                                                                                                        <  8:181046/148‑1 (MQ=255)                                  gcgcCGTAAGAGCCGGAACGCTGGATCATTTCATCCAGCATCGGAATCAGGCTCTCGCCGCCTTCAAGGCCGAATCGCTTGGTGCCCGGGTACTTGGTGCCCAGGTACTTTTCCAGGCCCTCACCGGCGGTTACGC‑GCTCGAGCAGGt                                                                                                       <  5:325251/148‑1 (MQ=255)                                  attgtcgcaccattggcgccgaattcacccacatcgtcgattccgagcagcgcagctggttccagcagcgcctggaaagcgtgcgcggccgtccggagtattccgctgacgtgCAGGCCCTCACCGGCGGTTACGC‑GCTCGAGCAGGTg                                                                                                      <  2:194831‑M1/36‑1 (MQ=255)                                        gcaccattggcgccgaattcacccacatcgtcgattccgagcagcgcagctggttccagcagcgcctggaaagcgtgcgcggccgtccggagtattccgctgacgtgCAGGCCCTCACCGGCGGTTACGC‑GCTCGAGCAGGTGGGCCTg                                                                                                >  1:194831‑M1/108‑149 (MQ=255)                                          agagCCGGAACGCTGGATCATTTCATCCAGCATCGGAATCAGGCTCTCGCCGCCTTCAAGGCCGAATCGCTTGGTGCCCGGGTACTTGGTGCCCAGGTACTTTTCCAGGCCCTCACCGGCGGTTACGC‑GCTCGAGCAGGTGGGCCTGc                                                                                               <  3:185607/148‑1 (MQ=255)                                                ggcgccgaattcacccacatcgtcgattccgagcagcgcagctggttccagcagcgcctggaaagcgtgcgcggccgtccggagtattccgctgacgtgCAGGCCCTCACCGGCGGTTACGC‑GCTCGAGCAGGGGGGCCTGCACGTCa                                                                                         >  5:62036‑M1/100‑148 (MQ=255)                                                  cgccgaattcacccacatcgtcgattccgagcagcgcagctggttccagcagcgcctggaaagcgtgcgcggccgtccggagtattccgctgacgtgCAGGCCCTCACCGGCGGTTACGC‑GCTCGAGCAGGTGGGCCTGc                                                                                               >  2:320899‑M1/98‑140 (MQ=255)                                                  cgccgaattcacccacatcgtcgattccgagcagcgcagctggttccagcagcgcctggaaagcgtgcgcggccgtccggagtattccgctgacgtgCAGGCCCTCACCGGCGGTTACGC‑GCTCGAGCAGGTGGGCCTGc                                                                                               <  1:320899‑M1/43‑1 (MQ=255)                                                         gATCATTTCATCCAGCATCGGAATCAGGCTCTCGCCGCCTTCAAGGCCGAATCGCTTGGTGCCCGGGTACTTGGTGCCCAGGTACTTTTCCAGGCCCTCACCGGCGGTTACGC‑GCTCGAGc                                                                                                           <  2:221228/121‑1 (MQ=255)                                                         gATCATTTCATCCAGCATCGGAATCAGGCTCTCGCCGCCTTCAAGGCCGAATCGCTTGGTGCCCGGGTACTTGGTGCCCAGGTACTTTTCCAGGCCCTCACCGGCGGTTACGC‑GCTCGAGc                                                                                                           >  1:221228/1‑121 (MQ=255)                                                                   tCCAGCATCGGAATCAGGCTCTCGCCGCCTTCAAGGCCGAATCGCTTGGTGCCCGGGTACTTGGTGCCCAGGTACTTTTCCAGGCCCTCACCGGCGGTTACGC‑GCTCGAGCAGGTGGGCCTGCACGTCAGCGGAATACTCCGGACGGcc                                                                     <  2:154880/149‑1 (MQ=255)                                                                   tCCAGCATCGGAATCAGGCTCTCGCCGCCTTCAAGGCCGAATCGCTTGGTGCCCGGGTACTTGGTGCCCAGGTACTTTTCCAGGCCCTCACCGGCGGTTACGC‑GCTCGAGCAGGTGGGCCTGCACGTCAGCGGAATACTCCGGACGGcc                                                                     >  7:288068/1‑149 (MQ=255)                                                                    ccAGCATCGGAATCAGGCTCTCGCCGCCTTCAAGGCCGAATCGCTTGGTGCCCGGGTACTTGGTGCCCAGGTACTTTTCCAGGCCCTCACCGGCGGTTACGC‑GCTCGAGCAGGTGGGCCTGCACGTCAGCGGAATACTCCGGACGGCcg                                                                    >  1:326358/1‑149 (MQ=255)                                                                             gAATCAGGCTCTCGCCGCCTTCAAGGCCGAATCGCTTGGTGCCCGGGTACTTGGTGCCCAGGTACTTTTCCAGGCCCTCACCGGCGGTTACGC‑GCTCGAGCAGGTGGGCCTGCACGTCAGCGGAATa                                                                                 <  2:209105/127‑1 (MQ=255)                                                                             gAATCAGGCTCTCGCCGCCTTCAAGGCCGAATCGCTTGGTGCCCGGGTACTTGGTGCCCAGGTACTTTTCCAGGCCCTCACCGGCGGTTACGC‑GCTCGAGCAGGTGGGCCTGCACGTCAGCGGAATa                                                                                 >  1:209105/1‑127 (MQ=255)                                                                                   ggCTCTCGCCGCCTTCAAGGCCGAATCGCTTGGTGCCCGGGTACTTGGTGCCCAGGTACTTTTCCAGGCCCTCACCGGCGGTTACGC‑GCTCGAGCAGGTGGGCCTGCACGTCAGCGGAATACTCCGGACGGCCGCGCACGCTTTCCAgg                                                     <  2:326358/149‑1 (MQ=255)                                                                                          gccgccTTCAAGGCCGAATCGCTTGGTGCCCGGGTACTTGGTGCCCAGGTACTTTTCCAGGCCCTCACCGGCGGTTACGC‑GCTCGa                                                                                                             >  8:127564/1‑86 (MQ=255)                                                                                          gccgccTTCAAGGCCGAATCGCTTGGTGCCCGGGTACTTGGTGCCCAGGTACTTTTCCAGGCCCTCACCGGCGGTTACGC‑GCTCGa                                                                                                             <  7:127564/86‑1 (MQ=255)                                                                                          gccgccTTCAAGGCCGAATCGCTTGGTGCCCGGGTACTTGGTGCCCAGGTACTTTTCCAGGCCCTCACCGGCGGTTACGC‑GCTCGAGCAGGTGGGCCTGCACGTCAGCGGAATACTCCGGACGGCCGCGCACGCTTTCCAGGCgctgc                                               <  1:44895/148‑1 (MQ=255)                                                                                             gccTTCAAGGCCGAATCGCTTGGTGCCCGGGTACTTGGTGCCCAGGTACTTTTCCAGGCCCTCACCGGCGGTTACGC‑GCTCGAGCAGGTGGGCCTGCACGTCAGCGGAATACTCCGGACGGCCGCGCACGCTTTCCAGGCGCTGCTGGa                                           <  6:296788/149‑1 (MQ=255)                                                                                               cTTCAAGGCCGAATCGCTTGGTGCCCGGGTACTTGGTGCCCAGGTACTTTTCCAGGCCCTCACCGGCGGTTACGC‑GCTCGAGCAGGTGGGCCTGCACGTCAGCGGAATACTCCGGACGGCCGCGCACGCTTTCCAGGCGCTGCTGGAAc                                         <  3:78073/149‑1 (MQ=255)                                                                                                        cGAATCGCTTGGTGCCCGGGTACTTGGTGCCCAGGTACTTTTCCAGGCCCTCACCGGCGGTTACGC‑GCTCGAGCAGGTGGGCCTGCACGTCAGCGGAATACTCCGGACGGCCGCGCACGCTTTCCAGGCGCTGCTGGAACCAgctgcgc                                <  8:288068/149‑1 (MQ=255)                                                                                                         gAATCGCTTGGTGCCCGGGTACTTGGTGCCCAGGTACTTTTCCAGGCCCTCACCGGCGCTTACGC‑GCTCGAGCAGGTGGGCCTGCACGTCAGCGGAATACTCCGGACGGCCGCGCACGCTTTCCAGGCGCTGCTGGAACCAgctgcgct                               >  8:135604/1‑149 (MQ=255)                                                                                                           aTCGCTTGGTGCCCGGGTACTTGGTGCCCAGGTACTTTTCCAGGCCCTCACCGGCGGTTACGC‑GCTCGAGCAGGTGGGCCTGCACGTCAGCGGAATACTCCGGACGGCCGCGCACGCTTTCCAGGCGCTGCTGGAACCAgctgcgctgc                             >  7:193334/1‑149 (MQ=255)                                                                                                               cTTGGTGCCCGGGTACTTGGTGCCCAGGTACTTTTCCAGGCCCTCACCGGCGGTTACGC‑GCTCGAGCAGGTGGGCCTGCACGTCAGCGGAATACTCCGGACGGCCGCGCACGCTTTCCAGGCGCTGCTGGAACCAGCTGCGCTGCTCg                          >  2:340545/1‑148 (MQ=255)                                                                                                                          ggTACTTGGTGCCCAGGTACTTTTCCAGGCCCTCACCGGCGGTTACGC‑GCTCGAGCAGGTGGGCCTGCACGTCAGCGGAATACTCCGGACGGCCGCGCACGCTTTCCAGGCGCTGCTGGAACCAGCTGCGCTGCTCGGAATCGACGAtg              <  8:193334/149‑1 (MQ=255)                                                                                                                                tGGTGCCCAGGTACTTTTCCAGGCCCTCACCGGCGGTTACGC‑GCTCGAGCAGGTGGGCCTGCACGTCAGCGGAATACTCCGGACGGCCGCTCACGCTTTCCAGGCGCTGCTGGAACCAGCTGCGCTGCTCGGAATCGACGATGTgg           <  5:234404/146‑1 (MQ=255)                                                                                                                                tGGTGCCCAGGTACTTTTCCAGGCCCTCACCGGCGGTTACGC‑GCTCGAGCAGGTGGGCCTGCACGTCAGCGGAATACTCCGGACGGCCGCGCACGCTTTCCAGGCGCTGCTGGAACCAGCTGCGCTGCTCGGAATCGACGATGTgg           >  6:234404/1‑146 (MQ=255)                                                                                                                                      ccAGGTACTTTTCCAGGCCCTCACCGGCGGTTACGC‑GCTCGAGCAGGTGGGCCTGCACGTCAGCGGAATACTCCGGACGGCCGCGCACGCTTTCCAGGCGCTGCTGGAACCAGCTGCGCTGCTCGGAATCGACGATGTGGGTGAATTCg  >  6:337532/1‑149 (MQ=255)                                                                                                                                       cAGGTACTTTTCCAGGCCCTCACCGGCGGTTACGCAGCTCGAGCAGGTGGGCCTGCACGTCAGCGGAATACTCCGGACGGCCGCGCACGCTTTCCAGGCGCTGCTGGAACCAGCTGCGCTGCTCGGAATCGACGATGTGGGTGAATTCg  >  1:53357/1‑149 (MQ=255)                                                                                                                                       cAGGTACTTTTCCAGGCCCTCACCGGCGGTTACGC‑GCTCGAGCAGGTGGGCCTGCACGTCAGCGGAATACTCCGGACGGCCGCGCACGCTTTCCAGGCGCTGCTGGAACCAGCTGCGCTGCTCGGAATCGACGAtgt             <  4:93750/137‑1 (MQ=255)                                                                                                                                       cAGGTACTTTTCCAGGCCCTCACCGGCGGTTACGC‑GCTCGAGCAGGTGGGCCTGCACGTCAGCGGAATACTCCGGACGGCCGCGCACGCTTTCCAGGCGCTGCTGGAACCAGCTGCGCTGCTCGGAATCGACGAtgt             >  3:93750/1‑137 (MQ=255)                                                                                                                                              ttttCCAGGCCCTCACCGGCGGTTACGC‑GCTCGAGCAGGTGGGCCTGCACGTCAGCGGAATACTCCGGACGGCCGCGCACGCTTTCCAGGCGCTGCTGGAACCAGCTGCGCTGCTCGGAATCGACGATGTgg           >  7:265121/1‑132 (MQ=255)                                                                                                                                              ttttCCAGGCCCTCACCGGCGGTTACGC‑GCTCGAGCAGGTGGGCCTGCACGTCAGCGGAATACTCCGGACGGCCGCGCACGCTTTCCAGGCGCTGCTGGAACCAGCTGCGCTGCTCGGAATCGACGATGTgg           <  8:265121/132‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                         CCACGGTGGGCCATGCCGATCACGACCTCCTTGGCGCCGTAAGAGCCGGAACGCTGGATCATTTCATCCAGCATCGGAATCAGGCTCTCGCCGCCTTCAAGGCCGAATCGCTTGGTGCCCGGGTACTTGGTGCCCAGGTACTTTTCCAGGCCCTCACCGGCGGTTACGC‑GCTCGAGCAGGTGGGCCTGCACGTCAGCGGAATACTCCGGACGGCCGCGCACGCTTTCCAGGCGCTGCTGGAACCAGCTGCGCTGCTCGGAATCGACGATGTGGGTGAATTCG  >  NC_002947/4734832‑4735113

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.