New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5120033 | 31 (0.590) | 3 (0.060) | 3/240 | NT | 8.8% | coding (223/558 nt) | PP_4506 | nitroreductase family protein |
? | NC_002947 | = 5120053 | 33 (0.660) | coding (203/558 nt) | PP_4506 | nitroreductase family protein |
CGTGCGCAGCAATCAGAATACCGTGCGCCGCACAGCCCGCCGCCAGGCGCTGCTCGGACTTGGGCACCTTGAAGTGGTCCTGCAACCTGGCCACCACCACGATCAGCAACGGCGCCCGCAGCGGCATCGCACGGGCCTTGTCCAGTGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5119883‑5120033 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgcagcACAAGGGCGATGCCAGCCAGGCTGCACTGGACAAGGCCCGTGCGATGCCGCTGCGGGCGCCGTTGCTGATCGTGGTGGTGGCCAGGTTGCAGGACCACTTCAAGGTGCCCAAGTCCGAGCAGCGCCTGGCGGCGGGCTGTGCG < NC_002947/5120053‑5119911 CGTGCGCAGCAATCAGAATACCGTGCGCCGCACAGCCCGCCGCCAGGCGCTGCTCGGACTTGGGCACCTTGAAGTGGTCCTGCAACCTGGCCACCACCACGATCAGCAACGGCGCCCGCAGCGGCATCGCACGGGCCTTGTCCAGTGCA < 1:10669/149‑1 GTGCGCAGCAATCAGAATACCGTGCGCCGCACAGCCCGCCGCCAGGCGCTGCTCGGACTTGGGCACCTTGAAGTGGTCCTGCAACCTGGCCACCACCACGATCAGCAACGGCGCCCGCAGCGGCATCGCACGGGCCTTGTCCAGTGCAG > 8:32668/1‑149 CCGCCGCCAGGCGCTGCTCGGACTTGGGCACCTTGAAGTGGTCCTGCAACCTGGCCACCACCACGATCAGCAACGGCGCCCGCAGCGGCATCGCACGGGCCTTGTCCAGTGCAGCACAAGGGCGATGCCAGCCAGGCTGCACTG < 5:166908/144‑1 CCGCCGCCAGGCGCTGCTCGGACTTGGGCACCTTGAAGTGGTCCTGCAACCTGGCCACCACCACGATCAGCAACGGCGCCCGCAGCGGCATCGCACGGGCCTTGTCCAGTGCAGCACAAGGGCGATGCCAGCCAGGCTGCACTG > 6:166908/1‑144 GGGCACCTTGAAGGGGTCCTGCAACCTGGCCACCACCACGATCAGCAACGGCGCCCGCAGCGGCATCGCACGGGCCTTGTCCAGTGCAGCACAAGGGCGATGCCAGCCAGGCTGCACT < 4:216727/118‑1 GTGCAGCACAAGGGCGATGCCAGCCAGGCTGCACTGGACAAGGCCCGTGCGATGCCGCTGCGGGCGCCGTTGCTGATCGTGGTGGTGGCCAGGTTGCAGGACCACTTCAAGGTG < 7:259889/114‑1 GTGCAGCACAAGGGCGATGCCAGCCAGGCTGCACTGGACAAGGCCCGTGCGATGCCGCTGCGGGCGCCGTTGCTGATCGTGGTGGTGGCCAGGTTGCAGGACCACTTCAAGGTG > 8:259889/1‑114 TGCAGCACAAGGGCGATGCCAGCCAGGCTGCACTGGACAAGGCCCGTGCGATGCCGCTGCGGGCGCCGTTGCTGATCGTGGTGGTGGCCAGGTTGCAGGACCACTTCAAGGTGCCCAAGTCCGAGCAGCGCCTGGCGGCGGGCTGTGCG < 7:39035/149‑1 CAGCACAAGGGCGATGCCAGCCAGGCTGCACTGGACAAGGCCCGTGCGATGCCGCTGCGGGCGCCGTTGCTGATCGTGGTGGTGGCCAGGTTGCAGGACCACTTCAAGGTGCCCAAGTCCGAGCAGCGCCTGGCGGCGGGCTG > 5:6314/1‑143 CAGCACAAGGGCGATGCCAGCCAGGCTGCACTGGACAAGGCCCGTGCGATGCCGCTGCGGGCGCCGTTGCTGATCGTGGTGGTGGCCAGGTTGCAGGACCACTTCAAGGTGCCCAAGTCCGAGCAGCGCCTGGCGGCGGGCTG < 6:6314/143‑1 CGTGCGCAGCAATCAGAATACCGTGCGCCGCACAGCCCGCCGCCAGGCGCTGCTCGGACTTGGGCACCTTGAAGTGGTCCTGCAACCTGGCCACCACCACGATCAGCAACGGCGCCCGCAGCGGCATCGCACGGGCCTTGTCCAGTGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5119883‑5120033 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgcagcACAAGGGCGATGCCAGCCAGGCTGCACTGGACAAGGCCCGTGCGATGCCGCTGCGGGCGCCGTTGCTGATCGTGGTGGTGGCCAGGTTGCAGGACCACTTCAAGGTGCCCAAGTCCGAGCAGCGCCTGGCGGCGGGCTGTGCG < NC_002947/5120053‑5119911 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |