| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5299051 = | 48 (0.910) | 3 (0.060) | 3/244 | NT | 5.9% | coding (1051/2076 nt) | recD | multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease |
| ? | NC_002947 | 5299093 = | 49 (0.970) | coding (1009/2076 nt) | recD | multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease | |||||
GGCTCGCGGCACTTTCGCCATCATGCTGGCAACCCGTTGCCGTTGGATGTGCTGGTGGTCGACGAAGCGTCGATGATCGACCTGGAAATGATGGCCAACCTGCTCGATGCCTTGCCGCCGCGGGCGCGTCTGGTGCTGCTGGGCGACAAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5299201‑5299051‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caaggCATCGAGCAGGTTGGCCATCATTTCCAGGTCGATCATCGACGCTTCGTCGACCACCAGCACATCCAACGGCAACGGGTTGCCAGCATGATGGCGAAAGTGCCGCGAGCCCGGGCGGCTGCCGAGCAGGCGATGCACGGTGCTGAC > NC_002947/5299093‑5299237 GGCTCGCGGCACTTTCGCCATCATGCTGTCAACCCGTTGCCGTTGGATGTGCTGGTGGTCGACGAAGCGTCGATGATCGACCTGGAAATGATGGCCAACCTGCTCGATGCCTTGCCGCCGCGGGCGCGTCTGGTGCTGCTGGGCGACAA < 5:208457/149‑1GGCTCGCGGCACTTTCGCCATCATGCTGGCAACCCGTTGCCGTTGGATGTGCTGGTGGTCGACGAAGCGTCGATGATCGACCTGGAAATGATGGCCAACCTGCTCGATGCCTTGCCGCCGCGGGCGCGTCTGGTGCTGCTGGGCGAC > 6:218628/1‑147 CTGGTGGTCGACGAAGCGTCGATGATCGACCTGGAAATGATGGCCAACCTGCTCGATGCCTTGCCGCCGCGGGCGCGTCTGGTGCTGCTGGGCGACAAG < 5:230735/99‑1 CTGGTGGTCGACGAAGCGTCGATGATCGACCTGGAAATGATGGCCAACCTGCTCGATGCCTTGCCGCCGCGGGCGCGTCTGGTGCTGCTGGGCGACAAG > 6:230735/1‑99 TGCCTTGCCGCCGCGGGCGCGTCTGGTGCTGCTGGGCGACAAGGCATCGAGCAGGTTGGCCATCATTTCCAGGTCGATCATCGACGCTTCGTCGACCACCAGCACATCCAACGGCAACGGGTTGCCAGCATGATGGCGAAAGTGCCGC > 7:300098/1‑148 CCTTGCCGCCGCGGGCGCGTCTGGTGCTGCTGGGCGACAAGGCATCGAGCAGGTTGGCCATCATTTCCAGGTCGATCATCGACGCTTCGTCGACCACCAGCACATCCAACGGCAACGGGTT < 7:112402/121‑1 CCTTGCCGCCGCGGGCGCGTCTGGTGCTGCTGGGCGACAAGGCATCGAGCAGGTTGGCCATCATTTCCAGGTCGATCATCGACGCTTCGTCGACCACCAGCACATCCAACGGCAACGGGTT > 8:112402/1‑121 AAGGCATCGAGCAGGTTGGCCATCATTTCCAGGTCGATCATCGACGCTTCGTCGACCACCAGCACATCCAACGGCAACGGGTTGCCAGCATGATGGCGAAAGTGCCGCGAGCCCGGGCGGCTGCCGAGCAGGCGATGCACGGTGCTGAC > 7:202760/1‑149 GGCTCGCGGCACTTTCGCCATCATGCTGGCAACCCGTTGCCGTTGGATGTGCTGGTGGTCGACGAAGCGTCGATGATCGACCTGGAAATGATGGCCAACCTGCTCGATGCCTTGCCGCCGCGGGCGCGTCTGGTGCTGCTGGGCGACAAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5299201‑5299051‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caaggCATCGAGCAGGTTGGCCATCATTTCCAGGTCGATCATCGACGCTTCGTCGACCACCAGCACATCCAACGGCAACGGGTTGCCAGCATGATGGCGAAAGTGCCGCGAGCCCGGGCGGCTGCCGAGCAGGCGATGCACGGTGCTGAC > NC_002947/5299093‑5299237 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |