New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5315699 =	41 (0.780)	4 (0.080)	4/244	NT	9.3%	coding (234/852 nt)	PP_4677	CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase
	?	NC_002947	5315752 =	39 (0.770)					coding (181/852 nt)	PP_4677	CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase

TGACGCCGAAGGCCGCAAGGTGCGCCACCGCGGCATCTACCTGTTGCCCAACCTGTTTACCACCGCCAACCTGTTTGCCGGTTTCTATTCCATCATCAGCTCGATGAGCGCACAGAGCGCCCTGAGTGCCGGCGACCCGCGCGAGGCGAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5315849‑5315699 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgagcTGATGATGGAATAGAAACCGGCAAACAGGTTGGCGGTGGTAAACAGGTTGGGCAACAGGTAGATGCCGCGGTGGCGCACCTTGCGGCCTTCGGCGTCATGCCCTTCTTCAACGTGCTCATCGACAGGTAGCAGGCTTTCGGCGTCG  >  NC_002947/5315752‑5315897                                                                                                                                                                                                                                                                                                           TGACGCCGAAGGCCGCAAGGTGCGCCACCGCGGCATCTACCTGTTGCCCAACCTGTTTACCACCGCCAACCTGTTTGCCGGTTTCTATTCCATCATCAGCTCGATGAGCGCACAGAGCGCCCTGAGTGCCGGCGACCCGCGCGAGGCGA                                                                                                                                                      <  4:106715/149‑1   ACGCCGAAGGCCGCAAGGTGCGCCACCGCGGCATCTACCTGTTGCCCAACCTGTTTACCACCGCCAACCTGTTTGCCGGTTTCTATTCCATCATCAGCTCGATGAGCGCACAGAGCGCCCTGAGTGGCGGCGACCCGCGCGAGGCGAG                                                                                                                                                     <  5:234825/148‑1   ACGCCGAAGGCCGCAAGGTGCGCCACCGCGGCATCTACCTGTTGCCCAACCTGTTTACCACCGCCAACCTGTTTGCCGGTTTCTATTCCATCATCAGCTCGATGAGCGCACAGAGCGCCCTGAGTGCCGGCGACCCGCGCGAGGCGAGC                                                                                                                                                    <  8:203538/149‑1                                                                                     CTATTCCATCATCAGCTCGATGAGCGCACAGAGCGCCCTGAGTGCCGGCGACCCGCGCGAGGCGAGCTGATGATGGAATAGAAACCGGCAAACAGGTTGGCGGTGGTAAACAGGTTGGGCAACAGGTAGATGCCGCGGTGGCGCACCTT                                                                  >  5:179536/1‑149                                                                                             TCATCAGCTCGATGAGCGCACAGAGCGCCCTGAGTGCCGGCGACCCGCGCGAGGCGAGCTGATGATGGAATAGAAACCGGCAAACAGGTTGGCGGTGGTAAACAGGTTGGGCAACAGGTAGATGCCGCGGTGGCGCACCTTGCGGCCTT                                                          >  6:202883/1‑149                                                                                                  AGCTCGATGAGCGCACAGAGCGCCCTGAGTGCCGGCGACCCGCGCGAGGCGAGCTGATGATGGAATAGAAACCGGCAAACAGGTTGGCGGTGGTAAACAGGTTGGGCAACAGGTAGATGCCGCGGTGGCGCACCTTGCGGCCTTCGGC                                                      <  5:202883/148‑1                                                                                                                                         CCGCGCGAGGCGAGCTGATGATGGAATAGAAACCGGCAAACAGGTTGGCGGTGGTAAACAGGTTGGGCAACAGGTAGATGCCGCGGTGGCGCACCTTGCGGCCTTCGGCGTCATGCCCTTCTTCAACGTGCTCATCGACAGGTAGCAGG              <  6:179536/149‑1                                                                                                                                                     AGCTGATGATGGAATAGAAACCGGCAAACAGGTTGGCGGTGGTAAACAGGTTGGGCAACAGGTAGATGCCGCGGTGGCGCACCTTGCGGCCTTCGGCGTCATGCCCTTCTTCAACGTGCTCATCGACAGGTAGCAGGCTTTCGGCGTCG  <  5:270532/149‑1                                                                                                                                                      GCTGATGATGGAATAGAAACCGGCAAACAGGTTGGCGGTGGTAAACAGGTTGGGCAACAGGTAGATGCCGCGGTGGCGCACCTTGCGGCCTTCGGCGTCATGCCCTTCTTCAACGTGCTCATCGACAGGTA                   <  3:321407/131‑1                                                                                                                                                      GCTGATGATGGAATAGAAACCGGCAAACAGGTTGGCGGTGGTAAACAGGTTGGGCAACAGGTAGATGCCGCGGTGGCGCACCTTGCGGCCTTCGGCGTCATGCCCTTCTTCAACGTGCTCATCGACAGGTA                   >  4:321407/1‑131                                                                                                                                                                                                                                                                                                           TGACGCCGAAGGCCGCAAGGTGCGCCACCGCGGCATCTACCTGTTGCCCAACCTGTTTACCACCGCCAACCTGTTTGCCGGTTTCTATTCCATCATCAGCTCGATGAGCGCACAGAGCGCCCTGAGTGCCGGCGACCCGCGCGAGGCGAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5315849‑5315699 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgagcTGATGATGGAATAGAAACCGGCAAACAGGTTGGCGGTGGTAAACAGGTTGGGCAACAGGTAGATGCCGCGGTGGCGCACCTTGCGGCCTTCGGCGTCATGCCCTTCTTCAACGTGCTCATCGACAGGTAGCAGGCTTTCGGCGTCG  >  NC_002947/5315752‑5315897

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.