| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5374504 = | 53 (1.000) | 4 (0.080) | 3/244 | NT | 8.3% | coding (937/1128 nt) | dnaJ | chaperone protein DnaJ |
| ? | NC_002947 | 5374545 = | 38 (0.750) | coding (896/1128 nt) | dnaJ | chaperone protein DnaJ | |||||
ATGGCAAGCATTTGTACTGTGAAGTGCCGATCAGCTACACCGATGCTGCCCTGGGTGGCGAGCTGGAAGTGCCGACCCTGGATGGTCGCGTGAAGCTGAAGATTCCGGAAGGCACCCAGACCGGCAAGCAGTTCCGTCTGCGTGGCAAGGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5374656‑5374504‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggtgCCTTCCGGAATCTTCAGCTTCACGCGACCATCCAGGGTCGGCACTTCCAGCTCGCCACCCAGGGCAGCATCGGTGTAGCTGATCGGCACTTCACAGTACAAATGCTTGCCATCGCGCTGGAAGATTTCGTGCTCACGCACGCTGATC > NC_002947/5374545‑5374691 ATGGCAAGCATTTGTACTGTGAAGTGCCGATCAGCTACACCGATGCTGCCCTGGGTGGCGAGCTGGAAGTGCCGACCCTGGATGGTCGCGTGAAGCTGAAGATTCCGGAAGGCACCCAGACCGGCAAGCAGTTCCGTCTGCGTGGCAAG < 6:93391/149‑1 CCTGGGTGGCGAGCTGGAAGTGCCGACCCTGGATGGTCGCGTGAAGCTGAAGATTCCGGAAGGCACCCAGACCGGCAAGCAGTTCCGTCTGCGTGGCAAGG > 7:144169/1‑101 CCTGGGTGGCGAGCTGGAAGTGCCGACCCTGGATGGTCGCGTGAAGCTGAAGATTCCGGAAGGCACCCAGACCGGCAAGCAGTTCCGTCTGCGTGGCAAGG < 8:144169/101‑1 GGAAGGCACCCAGACCGGCAAGCAGTTCCGTCTGCGTGGCAAGGGTGCCTTCCGGAATCTTCAGCTTCACGCGACCATCCAGGGTCGGCACTTCCAGCTCGCCACCCAGGGCAGCATCGGTGTAGCTGATCGGCACTTCACAGTACAAA > 8:104359/1‑149 GAAGGCACCCAGACCGGCAAGCAGTTCCGTCTGCGTGGCAAGGGTGCCTTCCGGAATCTTCAGCTTCACGCGACCATCCAGGGTCGGCACTTCCAGCTCGCCACCCAGGGCAGCATCGGTGTAGCTGATCGGCACTTCACAGTACAAAT > 1:303058/1‑149 GCACCCAGACCGGCAAGCAGTTCCGTCTGCGTGGCAAGGGTGCCTTCCGGAATCTTCAGCTTCACGCGACCATCCAGGGTCGGCACTTCCAGCTCGCCACCCAGGGCAGCATCGGTGTAGCTGATCGGCACTTCACAGTACAAATGCTT < 2:303058/149‑1 GCACCCAGACCGGAAAGCAGTTCCGTCTGCGTGGCAAGGGTGCCTTCCGGAATCTTCAGCTTCACGCGACCATCCAGGGTCGTCACTTCCAGCTCGCCACCCAGGGCAGCATCGGTGTAGCTGATCGGCACTTCACAGTACAAATGCTT < 7:104359/149‑1 GGTGCCTTCCGGAATCTTCAGCTTCACGCGACCATCCAGGGTCGGCACTTCCAGCTCGCCACCCAGGGCAGCATCGGTGTAGCTGATCGGCACTTCACAGTACAAATGCTTGCCATCGCGCTGGAAGATTTCGTGCTCACGCACGC < 3:97779/146‑1 TGCCTTCCGGAATCTTCAGCTTCACGCGACCATCCAGGGTCGGCACTTCCAGCTCGCCACCCAGGGCAGCATCGGTGTAGCTGATCGGCACTTCACAGTACAAATGCTTGCCATCGCGCTGGAAGATTTCGTGCTCACGCACGCTGATC < 4:18488/149‑1 TGCCTTCCGGAATCTTCAGCTTCACGCGACCATCCAGGGTCGGCACTTCCAGCTCGCCACCCAGGGCAGCATCGGTGTAGCTGATCGGCACTTCACAGTACAAATGCTTGCCATCGCGCTGGAAGATTTCGTGCTCACGCACGCTGATC < 5:93391/149‑1 ATGGCAAGCATTTGTACTGTGAAGTGCCGATCAGCTACACCGATGCTGCCCTGGGTGGCGAGCTGGAAGTGCCGACCCTGGATGGTCGCGTGAAGCTGAAGATTCCGGAAGGCACCCAGACCGGCAAGCAGTTCCGTCTGCGTGGCAAGGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5374656‑5374504‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggtgCCTTCCGGAATCTTCAGCTTCACGCGACCATCCAGGGTCGGCACTTCCAGCTCGCCACCCAGGGCAGCATCGGTGTAGCTGATCGGCACTTCACAGTACAAATGCTTGCCATCGCGCTGGAAGATTTCGTGCTCACGCACGCTGATC > NC_002947/5374545‑5374691 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |