New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5374504 = | 53 (1.000) | 4 (0.080) | 3/244 | NT | 8.3% | coding (937/1128 nt) | dnaJ | chaperone protein DnaJ |
? | NC_002947 | 5374545 = | 38 (0.750) | coding (896/1128 nt) | dnaJ | chaperone protein DnaJ |
TGGCCTTGGGCGAGTGGGAACTGTCACCTTCCAGCGAATCACGCAGCTCTTCGAGCAGCTCGCGCTGACGGCGACTGAGATTGACCGGGGTTTCTACGGCCACACGGCACAGCAGGTCACCCGCACCACCACCACGCACCGGGGCAACACCCTTGCCACGCAGACGGAACTGCTTGCCGGTCTGGGTGCCTTCCGGAATCTTCAGCTTCACGCGACCATCCAGGGTCGGCACTTCCAGCTCGCCACCCAGGGCAGCATCGGTGTAGCTGATCGGCACTTCACAGTACAAATGCTT > NC_002947/5374357‑5374651 | gatcagcgtgcgtgagcacgaaatcttccagcgcgatggcaagcatttgtactgtgaagtgccgatcagctacaccgatgctgccctgggtggcgagctggaagtgccgaccctggatggtcgcgtgaagctgaagattccggaaggCa < 5:93391‑M1/2‑1 (MQ=255) gatcagcgtgcgtgagcacgaaatcttccagcgcgatggcaagcatttgtactgtgaagtgccgatcagctacaccgatgctgccctgggtggcgagctggaagtgccgaccctggatggtcgcgtgaagctgaagattccggaaggCa < 4:18488‑M1/2‑1 (MQ=255) gcgtgcgtgagcacgaaatcttccagcgcgatggcaagcatttgtactgtgaagtgccgatcagctacaccgatgctgccctgggtggcgagctggaagtgccgaccctggatggtcgcgtgaagctgaagattccggaaggCAcc < 3:97779‑M1/4‑1 (MQ=255) gggCGAGTGGGAACTGTCACCTTCCAGCGAATCACGCAGCTCTTCGAGCAGCTCGCGCTGACGGCGACTGAGATTGACCGGGGTTTCTACGGCCACACGGCACAGCAGGTCACCCGCACCACCACCACGCACCGGGGCAACACCCtt < 7:193374/147‑1 (MQ=255) ggCGAGTGGGAACTGTCACCTTCCAGCGAATCACGCAGCTCTTCGAGCAGCTCGCGCTGACGGCGACTGAGATTGACCGGGGTTTCTACGGCCACACGGCACAGCAGGTCACCCGCACCACCACCACGCACCGGGGCAACACCCTTGc > 6:5599/1‑148 (MQ=255) gAACTGTCACCTTCCAGCGAATCACGCAGCTCTTCGAGCAGCTCGCGCTGACGGCGACTGAGATTGACCGGGGTTTCTACGGCCACACGGCACAGCAGGTCACCCGCACCACCACCACGCACCGGGGCAACACCCTTGCCACGCAGACg > 4:345028/1‑149 (MQ=255) gAACTGTCACCTTCCAGCGAATCACGCAGCTCTTCGAGCAGCTCGCGCTGACGGCGACTGAGATTGACCGGGGTTTCTACGGCCACACGGCACAGCAGGTCACCCGCACCACCACCACGCACCGGGGCAACACCCTTGCCACGCAGACg < 6:356790/149‑1 (MQ=255) gAACTGTCACCTTCCAGCGAATCACGCAGCTCTTCGAGCAGCTCGCGCTGACGGCGACTGAGATTGACCGGGGTTTCTACGGCCACACGGCACAGCAGGTCACCCGCACCACCACCACGCACCGGGGCAACACCCTTGCCACGCAGACg > 5:356790/1‑149 (MQ=255) tCACCTTCCAGCGAATCACGCAGCTCTTCGAGCAGCTCGCGCTGACGGCGACTGAGATTGACCGGGGTTTCTACGGCCACACGGCACAGCAGGTCACCCGCACCACCACCACGCACCGGGGCAACACCCtt < 5:135239/131‑1 (MQ=255) tCACCTTCCAGCGAATCACGCAGCTCTTCGAGCAGCTCGCGCTGACGGCGACTGAGATTGACCGGGGTTTCTACGGCCACACGGCACAGCAGGTCACCCGCACCACCACCACGCACCGGGGCAACACCCtt > 6:135239/1‑131 (MQ=255) aCCTTCCAGCGAATCACGCAGCTCTTCGAGCAGCTCGCGCTGACGGCGACTGAGATTGACCGGGGTTTCTACGGCCACACGGCACAGCAGGTCACCCGCACCACCACCACGCACCGGGGCAACACCCTTGCCACGCAGACGGAACTGc < 3:345028/148‑1 (MQ=255) ttCCAGCGAATCACGCAGCTCTTCGAGCAGCTCGCGCTGACGGCGACTGAGATTGACCGGGGTTTCTACGGCCACACGGCACAGCAGGTCACCCGCACCACCGCCACGCACCGGGGCAACACCCTTGCCACGCAGACGGAACTGCTTGc > 1:250058/1‑149 (MQ=255) cAGCGAATCACGCAGCTCTTCGAGCAGCTCGCGCTGACGGCGACTGAGATTGACCGGGGTTTCTACGGCCACACGGCACAGCAGGTCACCCGCACCACCACCACGCACCGGGGCAACACCCTTGCCACGCAGACGGAACTGCTTGCCgg > 2:194278/1‑149 (MQ=255) aGCGAATCACGCAGCTCTTCGAGCAGCTCGCGCTGACGGCGACTGAGATTGACCGGGGTTTCTACGGCCACACGGCACAGCAGGTCACCCGCACCACCACCACGCACCGGGGCAACACCCTTGCCACGCAGACGGAACTGCTTGCCGGt > 6:27002/1‑149 (MQ=255) aaTCACGCAGCTCTTCGAGCAGCTCGCGCTGACGGCGACTGAGATTGACCGGGGTTTCTACGGCCACACGGCACAGCAGGTCACCCGCACCACCACCACGCACCGGGGCAACACCCTTGCCACGCAGACGGAACTGCTTGCCGGTCTgg < 6:261256/149‑1 (MQ=255) tCACGCAGCTCTTCGAGCAGCTCGCGCTGACGGCGACTGAGATTGACCGGGGTTTCTACGGCCACACGGCACAGCAGGTCACCCGCACCACCGCCACGCACCGGGGCAACACCCTTGCCACGCAGACGGAACTGCTTGCCGGTCTGGGt < 2:250058/149‑1 (MQ=255) tCACGCAGCTCTTCGAGCAGCTCGCGCTGACGGCGACTGAGATTGACCGGGGTTTCTACGGCCACACGGCACAGCAGGTCACCCGCACCACCACCACGCACCGGGGCAACACCCTTGCCACGCAGACGGAACTGCTTGCCGGTCTGGGt < 5:5599/149‑1 (MQ=255) aagcatttgtactgtgaagtgccgatcagctacaccgatgctgccctgggtggcgagctggaagtgccgaccctggatggtcgcgtgaagctgaagattccggaaggCACCCTTGCCACGCAGACGGAACTGCTTGCCGGTCTGGGTGc < 2:303058‑M1/42‑1 (MQ=255) aagcatttgtactgtgaagtgccgatcagctacaccgatgctgccctgggtggcgagctggaagtgacgaccctggatggtcgcgtgaagctgaagattccggaaggCACCCTTGCCACGCAGACGGAACTGCTTTCCGGTCTGGGTGc < 7:104359‑M1/42‑1 (MQ=255) aCGCAGCTCTTCGAGCAGCTCGCGCTGACGGCGACTGAGATTGACCGGGGTTTCTACGGCCACACGGCACAGCAGGTCACCCGCACCACCACCACGCACCGGGGCAACACCCTTGCCACGCAGACGGAACTGCTTGCCGGTCTGGGTGc > 5:90614/1‑149 (MQ=255) aCGCAGCTCTTCGAGCAGCTCGCGCTGACGGCGACTGAGATTGACCGGGGTTTCTACGGCCACACGGCACAGCAGGTCACCCGCACCACCACCACGCACCGGGGCAACACCCTTGCCACGCAGACGGAACTGCTTGCCGGTCTGGGTGc > 2:268098/1‑149 (MQ=255) cGCAGCTCTTCGAGCAGCTCGCGCTGACGGCGACTGAGATTGACCGGGGTTTCTACGGCCACACGGCACAGCAGGTCACCCGCACCACCACCACGCACCGGGGCAACACCCTTGCCACGCAGACGGAACTGCTTGCCGGTCTGGGTGcc < 4:203436/149‑1 (MQ=255) atttgtactgtgaagtgccgatcagctacaccgatgctgccctgggtggcgagctggaagtgccgaccctggatggtcgcgtgaagctgaagattccggaaggCACCCTTGCCACGCAGACGGAACTGCTTGCCGGTCTGGGTGCCTTc > 1:303058‑M1/104‑149 (MQ=255) aGCTCTTCGAGCAGCTCGCGCTGACGGCGACTGAGATTGACCGGGGTTTCTACGGCCACACGGCACAGCAGGTCACCCGCACCACCACCACGCACCGGGGCAACACCCTTGCCACGCAGACGGAACTGCTTGCCGGTCTGGGTGCCTTc > 8:332062/1‑149 (MQ=255) aGCTCTTCGAGCAGCTCGCGCTGACGGCGACTGAGATTGACCGGGGTTTCTACGGCCACACGGCACAGCAGGTCACCCGCACCACCACCACGCACCGGGGCAACACCCTTGCCACGCAGACGGAACTGCTTGCCGGTCTGGGTGCCTTc < 6:90614/149‑1 (MQ=255) tttgtactgtgaagtgccgatcagctacaccgatgctgccctgggtggcgagctggaagtgccgaccctggatggtcgcgtgaagctgaagattccggaaggCACCCTTGCCACGCAGACGGAACTGCTTGCCGGTCTGGGTGCCTTcc > 8:104359‑M1/103‑149 (MQ=255) tctTCGAGCAGCTCGCGCTGACGGCGACTGAGATTGACCGGGGTTTCTACGGCCACACGGCACAGCAGGTCACCCGCACCACCACCACGCACCGGGGCAACACCCTTGCCACGCAGACGGAACTGCTTGCCGGTCTGGGt < 5:267447/140‑1 (MQ=255) tctTCGAGCAGCTCGCGCTGACGGCGACTGAGATTGACCGGGGTTTCTACGGCCACACGGCACAGCAGGTCACCCGCACCACCACCACGCACCGGGGCAACACCCTTGCCACGCAGACGGAACTGCTTGCCGGTCTGGGt > 6:272364/1‑140 (MQ=255) tctTCGAGCAGCTCGCGCTGACGGCGACTGAGATTGACCGGGGTTTCTACGGCCACACGGCACAGCAGGTCACCCGCACCACCACCACGCACCGGGGCAACACCCTTGCCACGCAGACGGAACTGCTTGCCGGTCTGGGt < 5:272364/140‑1 (MQ=255) tctTCGAGCAGCTCGCGCTGACGGCGACTGAGATTGACCGGGGTTTCTACGGCCACACGGCACAGCAGGTCACCCGCACCACCACCACGCACCGGGGCAACACCCTTGCCACGCAGACGGAACTGCTTGCCGGTCTGGGt > 6:267447/1‑140 (MQ=255) agcagcTCGCGCTGACGGCGACTGAGATTGACCGGGGTTTCTACGGCCACACGGCACAGCAGGTCACCCGCACCACCACCACGCACCGGGGCAACACCCTTGCCACGCAGACGGAACTGCTTGCCGGTCTGGGTGCCTTCCGGAATCtt < 8:226806/149‑1 (MQ=255) gcTCGCGCTGACGGCGACTGAGATTGACCGGGGTTTCTACGGCCACACGGCACAGCAGGTCACCCGCACCACCACCACGCACCGGGGCAACACCCTTGCCACGCAGACGGAACTGCTTg > 3:273379/1‑119 (MQ=255) gcTCGCGCTGACGGCGACTGAGATTGACCGGGGTTTCTACGGCCACACGGCACAGCAGGTCACCCGCACCACCACCACGCACCGGGGCAACACCCTTGCCACGCAGACGGAACTGCTTg < 4:273379/119‑1 (MQ=255) aCGGCGACTGAGATTGACCGGGGTTTCTACGGCCACACGGCACAGCAGGTCACCCGCACCACCACCACGCACCGGGGCAACACCCTTGCCACGCAGACGGAACTGCTTGCCGGTCTGGGTGCCTTCCGGAATCTTCAGCTTCACGCGa < 1:268098/148‑1 (MQ=255) gACTGAGATTGACCGGGGTTTCTACGGCCACACGGCACAGCAGGTCACCCGCACCACCACCACGCACCGGGGCAACACCCTTGCCACGCAGACGGAACTGCTTGCCGGTCTGGGTGCCTTCCGGAATCTTCAGCTTCACGCGACCATcc < 5:27002/149‑1 (MQ=255) tGAGATTGACCGGGGTTTCTACGGCCACACGGCACAGCAGGTCACCCGCACCACCACCACGCACCGGGGCAACACCCTTGCCACGCAGACGGAACTGCTTGCCGGTCTGGGTGCCTTCCGGAATCTTCAGCTTCACGCGACCATCCAgg < 7:332062/149‑1 (MQ=255) agaTTGACCGGGGTTTCTACGGCCACACGGCACAGCAGGTCACCCGCACCACCACCACGCACCGGGGCAACACCCTTGCCACGCAGACGGAACTGCTTGCCGGTCTGGGTGCCTTCCGGAATCTTCAGCTTCACGCGACCATCCAgg < 3:276120/147‑1 (MQ=255) agaTTGACCGGGGTTTCTACGGCCACACGGCACAGCAGGTCACCCGCACCACCACCACGCACCGGGGCAACACCCTTGCCACGCAGACGGAACTGCTTGCCGGTCTGGGTGCCTTCCGAAATCTTCAGCTTCACGCGACCATCCAGGGt > 5:282899/1‑149 (MQ=255) gaTTGACCGGGGTTTCTACGGCCACACGGCACAGCAGGTCACCCGCACCACCACCACGCACCGGGGCAACACCCTTGCCACGCAGACGGAACTGCTTGCCGGTCTGGGTGCCTTCCGGAATCTTCAGCTTCACGCGACCATCCAGGGTc > 7:62377/1‑149 (MQ=255) gACCGGGGTTTCTACGGCCACACGGCACAGCAGGTCACCCGCACCACCACCACGCACCGGGGCAACACCCTTGCCACGCAGACGGAACTGCTTGCCGGTCTGGGTGCCTTCCGGAATCTTCAGCTTCACGCGACCATCCAGGGTCGGCa > 4:330869/1‑149 (MQ=255) gggTTTCTACGGCCACACGGCACAGCAGGTCACCCGCACCACCACCACGCACCGGGGCAACACCCTTGCCACGCAGACGGAACTGCTTGCCGGTCTGGGTGCCTTCCGGaa < 5:154745/111‑1 (MQ=255) gggTTTCTACGGCCACACGGCACAGCAGGTCACCCGCACCACCACCACGCACCGGGGCAACACCCTTGCCACGCAGACGGAACTGCTTGCCGGTCTGGGTGCCTTCCGGaa > 6:154745/1‑111 (MQ=255) tttCTACGGCCACACGGCACAGCAGGTCACCCGCACCACCACCACGCACCGGGGCAACACCCTTGCCACGCAGACGGAACTGCTTGCCGGTCTGGGTGCCTTCCGGAATCTTCAGCTTCACGCGACCATCCAGGGTCGGCACTTCCAGc > 8:306980/1‑149 (MQ=255) cTACGGCCACACGGCACAGCAGGTCACCCGCACCACCACCACGCACCGGGGCAACACCCTTGCCACGCAGACGGAACTGCTTGCCGGTCTGGGTGCCTTCCGGAATCTTCAGCTTCACGCGACCATCCAGGGTCGGCACTTCCAGCTc < 3:330869/148‑1 (MQ=255) ggCCACACGGCACAGCAGGTCACCCGCACCACCACCACGCACCGGGGCAACACCCTTGc > 1:214497/1‑59 (MQ=255) ggCCACACGGCACAGCAGGTCACCCGCACCACCACCACGCACCGGGGCAACACCCTTGc < 2:214497/59‑1 (MQ=255) cacaCGGCACAGCAGGTCACCCGCACCACCACCACGCACCGGGGCAACACCCTTGCCACGCAGACGGAACTGCTTGCCGGTCTGGGTGCCTTCCGAAATCTTCAGCTTCACGCGACCATCCAGGGTCGGCACTTCCAGCTCGCCACCCa < 6:282899/149‑1 (MQ=255) acacGGCACAGCAGGTCACCCGCACCACCACCACGCACCGGGGCAACACCCTTGCCACGCAGACGGAACTGCTTGCCGGTCTGGGTGCCTTCCGGAATCTTCAGCTTCACGCGACCATCCAGGGTCg > 8:272042/1‑127 (MQ=255) acacGGCACAGCAGGTCACCCGCACCACCACCACGCACCGGGGCAACACCCTTGCCACGCAGACGGAACTGCTTGCCGGTCTGGGTGCCTTCCGGAATCTTCAGCTTCACGCGACCATCCAGGGTCg < 7:272042/127‑1 (MQ=255) gCACAGCAGGTCACCCGCACCACCACCACGCACCGGGGCAACACCCTTGCCACGCAGACGGAACTGCTTGCCGGTCTGGGTGCCTTCCGGAATCTTCAGCTTCACGCGACCATCCAGGGTCGGCACTTCCAGCTCGCCACCCAGGgcag > 2:79835/1‑149 (MQ=255) agcagGTCACCCGCACCACCACCACGCACCGGGGCAACACCCTTGCCACGCAGACGGAACTGCTTGCCGGTCTGGGTGCCTTCCGGAATCTTCAGCTTCACGCGACCATCCAGGGTCGGCACTTCCAGCTCGCCACCCAGGGCAGCATc > 7:5110/1‑149 (MQ=255) agcagGTCACCCGCACCACCACCACGCACCGGGGCAACACCCTTGCCACGCAGACGGAACTGCTTGCCGGTCTGGGTGCCTTCCGGAATCTTCAGCATCACGCGACCATCCAGGGTCGGCACTTCCAGCTAGCCACCCAGGGCAGCATc > 5:108766/1‑149 (MQ=255) agGTCACCCGCACCACCACCACGCACCGGGGCAACACCCTTGCCACGCAGACGGAACTGCTTGCCGGTCTGGGTGCCTTCCGGAATCTTCAGCTTCACGCGACCATCCAGGGTCGGCACTTCCAGCTCGCCACCCAGGGCAGCATCGgt < 1:194278/149‑1 (MQ=255) gccACCCGCACCACCCCCACGCACCTGGGCAACACCCTTGCCACGCAGACGTAACTGCTTGCCGGTCTGGGTGCCTTCCGGAATCTTCAGCTTCACGCGACCATCCAGGGTCGGCACTTCCAGCTCGCCACCCAGGGCAGCATCGgtgt < 6:108766/147‑1 (MQ=255) ccGCACCACCACCACGCACCGGGGCAACACCCTTGCCACGCAGACGGAACTGCTTGCCGGTCTGGGTGCCTTCCGGAATCTTCAGCTTCACGCGACCATCCAGGGTCGGCACTTCCAGCTCGCCACCCAGGGCAGCATCGGTGTAGCt > 8:25866/1‑148 (MQ=255) caccaccacGCACCGGGGCAACACCCTTGCCACGCAGACGGAACTGCTTGCCGGTCTGGGTGCCTTCCGGAATCTTCAGCTTCACGCGACCATCCAGGGTCGGCACTTCCAGCTCGCCACCCAGGGCAGCATCGGTGTAGCTGATCGGc > 3:18488/1‑149 (MQ=255) cacGCACCGGGGCAACACCCTTGCCACGCAGACGGAACTGCTTGCCGGTCTGGGTGCCTTCCGGAATCTTCAGCTTCACGCGACCATCCAGGGTCGGCACTTCCAGCTCGCCACCCAGGGCAGCATCGGTGTAGCTGATCGGCACTTca > 2:108966/1‑149 (MQ=255) cGCACCGGGGCAACACCCTTGCCACGCAGACGGAACTGCTTGCCGGTCTGGGTGCCTTCCGGAATCTTCAGCTTCACGCGACCATCCAGGGTCGGCACTTCCAGCTCGCCACCCAGGGCAGCATCGGTGTAGCTGATCGGCACTTcaca < 7:25866/149‑1 (MQ=255) gCACCGGGGCAACACCCTTGCCACGCAGACGGAACTGCTTGCCGGTCTGGGTGCCTTCCGGAATCTTCAGCTTCACGCGACCATCCAGGGTCGGCACTTCCAGCTCGCCACCCAGGGCAGCATCGGTGTAGCTGATCGGCACTTCACAg > 6:223723/1‑149 (MQ=255) ccGGGGCAACACCCTTGCCACGCAGACGGAACTGCTTGCCGGTCTGGGTGCCTTCCGGAATCTTCAGCTTCACGCGACCATCCAGGGTCGGCACTTCCAGCTCGCCACCCAGGGCAGCATCGGTGTAGCTGATCGGCACTTCACAGTAc < 7:306980/149‑1 (MQ=255) acacCCTTGCCACGCAGACGGAACTGCTTGCCGGTCTGGGTGCCTTCCGGAATCTTCAGCTTCACGCGACCATCCAGGGTCGGCACTTCCAGCTCGCCACCCAGGGCAGCATCGGTGTAGCTGATCGGCACTTCACAGTACAAATGCtt < 5:223723/149‑1 (MQ=255) acacCCTTGCCACGCAGACGGAACTGCTTGCCGGTCTGGGTGCCTTCCGGAATCTTCAGCTTCACGCGACCATCCAGGGTCGGCACTTCCAGCTCGCCACCCAGGGCAGCATCGGTGTAGCTGATCGGCACTTCACAGTACAAATGCtt > 5:289663/1‑149 (MQ=255) | TGGCCTTGGGCGAGTGGGAACTGTCACCTTCCAGCGAATCACGCAGCTCTTCGAGCAGCTCGCGCTGACGGCGACTGAGATTGACCGGGGTTTCTACGGCCACACGGCACAGCAGGTCACCCGCACCACCACCACGCACCGGGGCAACACCCTTGCCACGCAGACGGAACTGCTTGCCGGTCTGGGTGCCTTCCGGAATCTTCAGCTTCACGCGACCATCCAGGGTCGGCACTTCCAGCTCGCCACCCAGGGCAGCATCGGTGTAGCTGATCGGCACTTCACAGTACAAATGCTT > NC_002947/5374357‑5374651 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |