| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5413023 = | 44 (0.830) | 5 (0.100) | 5/238 | NT | 12.3% | coding (1147/2394 nt) | PP_4755 | ferrichrome‑iron receptor |
| ? | NC_002947 | 5413089 = | 30 (0.610) | coding (1081/2394 nt) | PP_4755 | ferrichrome‑iron receptor | |||||
CGATAACCGCTTCGTGATGGGCGGCCTGACCTGGGCGCCGACCGACTTCACCTCGGCCACGGTGGTGCTGGATTACCTGAAGACCAACAGCTCGCCGAACAGCGGTGGCTACCCGCTGGACAAGGGGTACGACCGCAGCGACTTCTACGGCGAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5413177‑5413023‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgagcTGTTGGTCTTCAGGTAATCCAGCACCACCGTGGCCGAGGTGAAGTCGGTCGGCGCCCAGGTCAGGCCGCCCATCACGAAGCGGTTATCGTCCTGCGAATGGTCGTACTCGCGGTCGCTGTTCTGCATCTTGGCCGTGAAGCGGCC > NC_002947/5413089‑5413233 CGATAACCGCTTCGTGATGGGCGGCCTGACCTGGGCGCCGACCGACTTCACCTCGGCCACGGTGGTGCTGGATTACCTGAAGACCAACAGCTCGCCGAACAGCGGTGGCTACCCGCTGGACAAGGGGTACGACCGCAGCGACTTCTACG < 4:65832/149‑1 ATAACCGCTTCGTGATGGGCGGCCTGACCTGGGCGCCGACCGACTTCACCTCGGCCACGGTGGTGCTGGATTACCTGAAGACCAACAGCTCGCCGAACAGCGGTGGCTACCCGCTGGACAAGGGGTACGACCGCAGCGACTTCTACGGC < 2:33244/149‑1 CAACAGCTCGCCGAACAGCGGTGGCTACCCGCTGGACAAGGGGTACGACCGCAGCGACTTCTACGGCGAGCTGTTGGTCTTCAGGTAATCCAGCACCACCGTGGCCGAGGTGAAGTCGGTCGGCGCCCAGGTCAGGCCGCCCATCACG > 5:8135/1‑148 AGCTCGCCGAACAGCGGTGGCTACCCGCTGGACAAGGGGTACGACCGCAGCGACTTCTACGGCGAGCTGTTGGTCTTCAGGTAATCCAGCACCACCGTGGCCGAGGTGAAGTCGGTCGGCGCCCAGGTCAGGCCGCCCATCACGAAGCG < 6:8135/149‑1 GCTCGCCGAACAGCGGTGGCTACCCGCTGGACAAGGGGTACGACCGCAGCGACTTCTACGGCGAGCTGTTGGTCTTCAGGTAATCCAGCACCACCGTGGCCGAGGTGAAGTCGGTCGGCGCCCAGGTCAGGCCGCCCATCACGAAGCGG > 7:308456/1‑149 GACTTCTACGGCGAGCTGTTGGTCTTCAGGTAATCCAGCACCACCGTGGCCGAGGTGAAGTCGGTCGGCGCCCAGGTCAGGCCGCCCATCACGAAGCGGTTATCGTCCTGCGAATGGTCGTACTCGCGGTCGCTGTTCTGCATCTTGGC < 8:308456/149‑1 CTTCTACGGCGAGCTGTTGGTCTTCAGGTAATCCAGCACCACCGTGGCCGAGGTGAAGTCGGTCGGCGCCCAGGTCAGGCCGCCCATCACGAAGCGGTTATCGTCCTGCGAATGGTCGTACTCGCGGTCGCTGTTCTGCATCTTGGCCG < 5:331290/149‑1 GGCGAGCTGTTGGTCTTCAGGTAATCCAGCACCACCGTGGCCGAGGTGAAGTCGGTCGGCGCCCAGGTCAGGCCGCCCATCACGAAGCGGTTATCGTCCTGCGAATGGTCGTACTCGCGGTCGCTGTTCTGCATCTTGGCCGTGAAGCG > 7:240112/1‑149 GAGCTGTTGGTCTTCAGGTAATCCAGCACCACCGTGGCCGAGGTGAAGTCGGTCGGCGCCCAGGTCAGGCCGCCCATCACGAAGCGGTTATCGTCCTGCGAATGGTCGTACTCGCGGTCGCTGTTCTGCATCTTGGCCGTGAAGCGGCC < 8:143870/149‑1 CGATAACCGCTTCGTGATGGGCGGCCTGACCTGGGCGCCGACCGACTTCACCTCGGCCACGGTGGTGCTGGATTACCTGAAGACCAACAGCTCGCCGAACAGCGGTGGCTACCCGCTGGACAAGGGGTACGACCGCAGCGACTTCTACGGCGAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5413177‑5413023‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgagcTGTTGGTCTTCAGGTAATCCAGCACCACCGTGGCCGAGGTGAAGTCGGTCGGCGCCCAGGTCAGGCCGCCCATCACGAAGCGGTTATCGTCCTGCGAATGGTCGTACTCGCGGTCGCTGTTCTGCATCTTGGCCGTGAAGCGGCC > NC_002947/5413089‑5413233 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |