New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5413023 =	44 (0.830)	5 (0.100)	5/238	NT	12.3%	coding (1147/2394 nt)	PP_4755	ferrichrome‑iron receptor
	?	NC_002947	5413089 =	30 (0.610)					coding (1081/2394 nt)	PP_4755	ferrichrome‑iron receptor

CGCAGGGTGAAGCCGTTGTCGAAGTCGTGGGTAATGTTGCCGCTCAGGCTGGTGCGCTCGACATCGTGGAAGTTGTAGCCGGGCTCGCCGTAGAAGTCGCTGCGGTCGTACCCCTTGTCCAGCGGGTAGCCACCGCTGTTCGGCGAGCTGTTGGTCTTCAGGTAATCCAGCACCACCGTGGCCGAGGTGAAGTCGGTCGGCGCCCAGGTCAGGCCGCCCATCACGAAGCGGTTATCGTCCTGCGAATGGTCGTACTCGCGGTCGCTGTTCTGCATCTTGGCCGTGAAGCGGCC  >  NC_002947/5412941‑5413233                                                                                                                                                     |                                                                                                                                                 cgcttcgtgatgggcggcctgacctgggcgccgaccgacttcacctcggccacggtggtgctggattacctgaagaccaacaGCTCGCCGTAGAAGTCGCTGCGGTCGTACCCCTTGTCCAGCGGGTAGCCACCGCTGTTCGGCGAGCt                                                                                                                                                  <  6:8135‑M1/67‑1 (MQ=255)    aGGGTGAAGCCGTTGTCGAAGTCGTGGGTAATGTTGCCGCTCAGGCTGGTGCGCTCGACATCGTGGAAGTTGTAGCCGGGCTCGCCGTAGAAGTCGCTGCGGTCGTACCCCTTGTCCAGCGGGTAGCCACCGCTGTTCGGCGAGCTGtt                                                                                                                                               >  7:143870/1‑149 (MQ=255)     gggTGAAGCCGTTGTCGAAGTCGTGGGTAATGTTGCCGCTCAGGCTGGTGCGCTCGACATCGTGGAAGTTGTAGCCGGGCTCGCCGTAGAAGTCGCTGCGGTCGTACCCCTTGTCCAGCGGGTAGCCACCGCTGTTCGGCGAGCTGTTg                                                                                                                                              >  1:45092/1‑149 (MQ=255)      cgtgatgggcggcctgacctgggcgccgaccgacttcacctcggccacggtggtgctggattacctgaagaccaacaGCTCGCCGTAGAAGTCGCTGCGGTCGTACCCCTTGTCCAGCGGGTAGCCACCGCTGTTCGGCGAGCTGTTg                                                                                                                                              >  5:8135‑M1/78‑148 (MQ=255)           aGCCGTTGTCGAAGTCGTGGGTAATGTTGCCGCTCAGGCTGGTGCGCTCGACATCGTGGAAGTTGTAGCCGGGCTCGCCGTAGAAGTCGCTGCGGTCGTACCCCTTGTCCAGCGGGTAGCCACCGCTGTTCGGCGAGCTGTTGGTCtt                                                                                                                                         <  3:134873/148‑1 (MQ=255)           aGCCGTTGTCGAAGTCGTGGGTAATGTTGCCGCTCAGGCTGGTGCGCTCGACATCGTGGAAGTTGTAGCCGGGCTCGCCGTAGAAGTCGCTGCGGTCGTACCCCTTGTCCAGCGGGTAGCCACCGCTGTTCGGCGAGCTGTTGGTCtt                                                                                                                                         >  4:134873/1‑148 (MQ=255)              cGTTGTCGAAGTCGTGGGTAATGTTGCCGCTCAGGCTGGTGCGCTCGACATCGTGGAAGTTGTAGCCGGGCTCGCCGTAGAAGTCGCTGCGGTCGTACCCCTTGTCCAGCGGGTAGCCACCGCTGTTCGGCGAGCTGTTGGTCTTCAgg                                                                                                                                     <  6:103867/149‑1 (MQ=255)                     gAAGTCGTGGGTAATGTTGCCGCTCAGGCTGGTGCGCTCGACATCGTGGAAGTTGTAGCCGGGCTCGCCGTAGAAGTCGCTGCGGTCGTACCCCTTGTCCAGCGGGTAGCCACCGCTGTTCGGCGAGCTGTTGGTCTTCAGGTAATCCa                                                                                                                              <  7:314751/149‑1 (MQ=255)                                tAATGTTGCCGCTCAGGCTGGTGCGCTCGACATCGTGGAAGTTGTAGCCGGGCTCGCCGTAGAAGTCGCTGCGGTCGTACCCCTTGTCCAGCGGGTAGCCACCGCTGTTCGGCGAGCTGTTGGTCTTCAGGTAATCCAGCACCACCGTg                                                                                                                   >  8:30733/1‑149 (MQ=255)                                     ttGCCGCTCAGGCTGGTGCGCTCGACATCGTGGAAGTTGTAGCCGGGCTCGCCGTAGAAGTCGCTGCGGTCGTACCCCTTGTCCAGCGGGTAGCCACCGCTGTTCGGCGAGCTGTTGGTCTTCAGGTa                                                                                                                                   >  5:327897/1‑128 (MQ=255)                                     ttGCCGCTCAGGCTGGTGCGCTCGACATCGTGGAAGTTGTAGCCGGGCTCGCCGTAGAAGTCGCTGCGGTCGTACCCCTTGTCCAGCGGGTAGCCACCGCTGTTCGGCGAGCTGTTGGTCTTCAGGTa                                                                                                                                   <  6:327897/128‑1 (MQ=255)                                     ttGCCGCTCAGGCTGGTGCGCTCGACATCGTGGAAGTTGTAGCCGGGCTCGCCGTAGAAGTCGCTGCGGTCGTACCCCTTGTCCAGCGGGTAGCCACCGCTGTTCGGCGAGCTGTTGGTCTTCAGGTAATCCAGCACCACCGTGGCCGa                                                                                                              <  1:138700/149‑1 (MQ=255)                                       gCCGCTCAGGCTGGTGCGCTCGACATCGTGGAAGTTGTAGCCGGGCTCGCCGTAGAAGTCGCTGCGGTCGTACCCCTTGTCCAGCGGGTAGCCACCGCTGTTCGGCGAGCTGTTGGTCTTCAGGTAATCCAGCACCACCGTGGCCGAg                                                                                                             <  3:81379/148‑1 (MQ=255)                                        ccGCTCAGGCTGGTGCGCTCGACATCGTGGAAGTTGTAGCCGGGCTCGCCGTAGAAGTCGCTGCGGTCGTACCCCTTGTCCAGCGGGTAGCCACCGCTGTTCGGCGAGCTGTTGGTCTTCAGGTAATCCAGCACCACCGTGGCCGAgg                                                                                                            <  2:45092/148‑1 (MQ=255)                                                   ggTGCGCTCGACATCGTGGAAGTTGTAGCCGGGCTCGCCGTAGAAGTCGCTGCGGTCGTACCCCTTGTCCAGCGGGTAGCCACCGCTGTTCGGCGAGCTGTTGGTCTTCAGGTAATCCAGCACCACCGTGGCCGAGGTg                                                                                                          <  3:66112/139‑1 (MQ=255)                                                   ggTGCGCTCGACATCGTGGAAGTTGTAGCCGGGCTCGCCGTAGAAGTCGCTGCGGTCGTACCCCTTGTCCAGCGGGTAGCCACCGCTGTTCGGCGAGCTGTTGGTCTTCAGGTAATCCAGCACCACCGTGGCCGAGGTg                                                                                                          >  4:66112/1‑139 (MQ=255)                                                           cGACATCGTGGAAGTTGTAGCCGGGCTCGCCGTAGAAGTCGCTGCGGTCGTACCCCTTGTCCAGCGGGTAGCCACCGCTGTTCGGCGAGCTGTTGGTCTTCAGGTAATCCAGCACCACCGTGGCCGAGGTGAAGTCGGTCGGCGCCCAg                                                                                        >  6:250457/1‑149 (MQ=255)                                                             aCATCGTGGAAGTTGTAGCCGGGCTCGCCGTAGAAGTCGCTGCGGTCGTACCCCTTGTCCAGCGGGTAGCCACCGCTGTTCGGCGAGCTGTTGGTCTTCAGGTAATCCAGCACCACCGTGGCCGAGGTGAAGTCGGTCGGCGCCCAGGt                                                                                      <  6:332237/149‑1 (MQ=255)                                                                  gTGGAAGTTGTAGCCGGGCTCGCCGTAGAAGTCGCTGCGGTCGTACCCCTTGTCCAGCGGGTAGCCACCGCTGTTCGGCGAGCTGTTGGTCTTCAGGTAATCCAGCACCACCGTGGCCGAGGTGAAGTCGGTCGGCGCCCAGGTCAGgc                                                                                 >  1:211109/1‑149 (MQ=255)                                                                   tGGAAGTTGTAGCCGGGCTCGCCGTAGAAGTCGCTGCGGTCGTACCCCTTGTCCAGCGGGTAGCCACCGCTGTTCGGCGAGCTGTTGGTCTTCAGGTAATCCAGcac                                                                                                                          <  1:314841/107‑1 (MQ=255)                                                                   tGGAAGTTGTAGCCGGGCTCGCCGTAGAAGTCGCTGCGGTCGTACCCCTTGTCCAGCGGGTAGCCACCGCTGTTCGGCGAGCTGTTGGTCTTCAGGTAATCCAGcac                                                                                                                          >  2:314841/1‑107 (MQ=255)                                                                     gAAGTTGTAGCCGGGCTCGCCGTAGAAGTCGCTGCGGTCGTACCCCTTGTCCAGCGGGTAGCCACCGCTGTTCGGCGAGCTGTTGGTCTTc                                                                                                                                        >  4:314412/1‑91 (MQ=255)                                                                     gAAGTTGTAGCCGGGCTCGCCGTAGAAGTCGCTGCGGTCGTACCCCTTGTCCAGCGGGTAGCCACCGCTGTTCGGCGAGCTGTTGGTCTTc                                                                                                                                        <  3:314412/91‑1 (MQ=255)                                                                       aGTTGTAGCCGGGCTCGCCGTAGAAGTCGCTGCGGTCGTACCCCTTGTCCAGCGGGTAGCCACCGCTGTTCGGCGAGCTGTTGGTCTTCAGGTAATCCAGCACCACCGTGGCCGAGGTGAAGTCGGTCGGCGCCCAGGTCAGGCCGccc                                                                            <  2:211109/149‑1 (MQ=255)                                                                            tAGCCGGGCTCGCCGTAGAAGTCGCTGCGGTCGTACCCCTTGTCCAGCGGGTAGCCACCGCTGTTCGGCGAGCTGTTGGTCTTCAGGTAATCCAGCACCACCGTGGCCGAGGTGAAGTCGGTCGGCGCCCAGGTCAGGCCGCCCATCa                                                                        <  7:30733/148‑1 (MQ=255)                                                                              caacagctcgccgaacagcggtggctacccgctggacaaggggtacgaccgcagcgacttctacggcgagcTGTTGGTCTTCAGGTAATCCAGCACCACCGTGGCCGAGGTGAAGTCGGTCGGCGCCCAGGTCAGGCCGCCCATCACg                                                                      >  5:8135‑M2/72‑148 (MQ=255)                                                                                  agctcgccgaacagcggtggctacccgctggacaaggggtacgaccgcagcgacttctacggcgagcTGTTGGTCTTCAGGTAATCCAGCACCACCGTGGCCGAGGTGAAGTCGGTCGGCGCCCAGGTCAGGCCGCCCATCACGAAGCg                                                                 <  6:8135‑M2/82‑1 (MQ=255)                                                                                   gctcgccgaacagcggtggctacccgctggacaaggggtacgaccgcagcgacttctacggcgagcTGTTGGTCTTCAGGTAATCCAGCACCACCGTGGCCGAGGTGAAGTCGGTCGGCGCCCAGGTCAGGCCGCCCATCACGAAGCgg                                                                >  7:308456‑M2/67‑149 (MQ=255)                                                                                       GCCGTAGAAGTCGCTGCGGTCGTACCCCTTGTCCAGCGGGTAGCCACCGCTGTTCGGCGAGCTGTTGGTCTTCAGGTAATCCAGCACCACCGTGGCCGAGGTGAAGTCGGTCGGCGCCCAGGTCAGGCCGCCCATCACGAAGCGGTTAt                                                            <  2:33244‑M1/149‑1 (MQ=255)                                                                                         CGTAGAAGTCGCTGCGGTCGTACCCCTTGTCCAGCGGGTAGCCACCGCTGTTCGGCGAGCTGTTGGTCTTCAGGTAATCCAGCACCACCGTGGCCGAGGTGAAGTCGGTCGGCGCCCAGGTCAGGCCGCCCATCACGAAGCGGTTATCg                                                          <  4:65832‑M1/149‑1 (MQ=255)                                                                                           tAGAAGTCGCTGCGGTCGTACCCCTTGTCCAGCGGGTAGCCACCGCTGTTCGGCGAGCTGTTGGTCTTCAGGTAATCCAGCACCACCGTGGCCGAGGTGAAGTCGGTCGGCGCCCAGGt                                                                                      <  5:244695/119‑1 (MQ=255)                                                                                           tAGAAGTCGCTGCGGTCGTACCCCTTGTCCAGCGGGTAGCCACCGCTGTTCGGCGAGCTGTTGGTCTTCAGGTAATCCAGCACCACCGTGGCCGAGGTGAAGTCGGTCGGCGCCCAGGt                                                                                      >  6:244695/1‑119 (MQ=255)                                                                                               aGTCGCTGCGGTCGTACCCCTTGTCCAGCGGGTAGCCACCGCTGTTCGGCGAGCTGTTGGTCTTCAGGTAATCCAGCACCACCGTGGCCGAGGTGAAGTCGGTCGGCGCCCAGGTCAGGCCGCCCATCACGAAGCGGTTATCGTCCTGc                                                    <  5:250457/149‑1 (MQ=255)                                                                                                gTCGCTGCGGTCGTACCCCTTGTCCAGCGGGTAGCCACCGCTGTTCGGCGAGCTGTTGGTCTTCAGGTAATCCAGCACCACCGTGGCCGAGGTGAAGTCGGTCGGCGCCCAGGTCAGGCCGCCCATCACGAAGCGGTTATCGTCCTGc                                                    >  6:321178/1‑148 (MQ=255)                                                                                                       cGGTCGTACCCCTTGTCCAGCGGGTAGCCACCGCTGTTCGGCGAGCTGTTGGTCTTCAGGTAATCCAGCACCACCGTGGCCGAGGTGAAGTCGGTCGGCGCCCAGGTCAGGCCGCCCATCACGAAGCGGTTATCGTCCTGCGAATgg                                              <  5:321178/147‑1 (MQ=255)                                                                                                              aCCCCTTGTCCAGCGGGTAGCCACCGCTGTTCGGCGAGCTGTTGGTCTTCAGGTAATCCAGCACCACCGTGGCCGAGGTGAAGTCGGTCGGCGCCCAGGTCAGGCCGCCCATCACGAAGCGGTTATCGTCCTGCGAATGGTCGTACTcg                                     >  5:61347/1‑149 (MQ=255)                                                                                                                cccTTGTCCAGCTGGTAGCCACCGCTGTTTGGCGAGCTGTTGGTCTTCAGGTAATCCAGCACCACCGTGGCCGAGGTGAAGTCGGTCGGCGCCCAGGTCAGGCCGCCCATCACGAAGCGGTTATCGTCCTGCGAATGGTCGTACTcgcg                                   <  6:52896/149‑1 (MQ=255)                                                                                                                                    aCCGCTGTTCGGCGAGCTGTTGGTCTTCAGGTAATCCAGCACCACCGTGGCCGAGGTGAAGTCGGTCGGCGCCCAGGTCAGGCCGCCCATCACGAAGCGGTTATCGTCCTGCGAATGGTCGTACTCGCGGTCGCTGTTCTGCATCTTgg               >  4:25789/1‑149 (MQ=255)                                                                                                                                    aCCGCTGTTCGGCGAGCTGTTGGTCTTCAGGTAATCCAGCACCACCGTGGCCGAGGTGAAGTCGGTCGGCGCCCAGGTCAGGCCGCCCATCACGAAGCGGTTATCGTCCTGCGAATGGTCGTACTCGCGGTCGCTGTTCTGCATCTTgg               >  5:284475/1‑149 (MQ=255)                                                                                                                                     gacttctacggcgagcTGTTGGTCTTCAGGTAATCCAGCACCACCGTGGCCGAGGTGAAGTCGGTCGGCGCCCAGGTCAGGCCGCCCATCACGAAGCGGTTATCGTCCTGCGAATGGTCGTACTCGCGGTCGCTGTTCTGCATCTTGGc              <  8:308456‑M2/133‑1 (MQ=255)                                                                                                                                       cttctacggcgagcTGTTGGTCTTCAGGTAATCCAGCACCACCGTGGCCGAGGTGAAGTCGGTCGGCGCCCAGGTCAGGCCGCCCATCACGAAGCGGTTATCGTCCTGCGAATGGTCGTACTCGCGGTCGCTGTTCTGCATCTTGGCCg            <  5:331290‑M2/135‑1 (MQ=255)                                                                                                                                              ggcgagcTGTTGGTCTTCAGGTAATCCAGCACCACCGTGGCCGAGGTGAAGTCGGTCGGCGCCCAGGTCAGGCCGCCCATCACGAAGCGGTTATCGTCCTGCGAATGGTCGTACTCGCGGTCGCTGTTCTGCATCTTGGCCGTGAAGcg     >  7:240112‑M2/8‑149 (MQ=255)                                                                                                                                                 gagcTGTTGGTCTTCAGGTAATCCAGCACCACCGTGGCCGAGGTGAAGTCGGTCGGCGCCCAGGTCAGGCCGCCCATCACGAAGCGGTTATCGTCCTGCGAATGGTCGTACTCGCGGTCGCTGTTCTGCATCTTGGCCGTGAAGcggcc  <  8:143870‑M2/145‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                 CGCAGGGTGAAGCCGTTGTCGAAGTCGTGGGTAATGTTGCCGCTCAGGCTGGTGCGCTCGACATCGTGGAAGTTGTAGCCGGGCTCGCCGTAGAAGTCGCTGCGGTCGTACCCCTTGTCCAGCGGGTAGCCACCGCTGTTCGGCGAGCTGTTGGTCTTCAGGTAATCCAGCACCACCGTGGCCGAGGTGAAGTCGGTCGGCGCCCAGGTCAGGCCGCCCATCACGAAGCGGTTATCGTCCTGCGAATGGTCGTACTCGCGGTCGCTGTTCTGCATCTTGGCCGTGAAGCGGCC  >  NC_002947/5412941‑5413233

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.