New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5844930 =	54 (1.020)	3 (0.060)	3/240	NT	5.9%	coding (1552/1599 nt)	PP_5122	GMC family oxidoreductase
	?	NC_002947	5844965 =	45 (0.900)					coding (1587/1599 nt)	PP_5122	GMC family oxidoreductase

CTGGCTGGAGTGCGTTGGGGAGTCGGATGGTAGCGCAGCGACGGCGCCCCGGCCAAGTCATGCGGCCGACTGATGGCACTATAGACAGGGGCCATGTTCGTTGTCATGCGCTGTGTGCCAGGCGGCTGACCAGTGCTTCGCTGAGCCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5845080‑5844930 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctggcACACAGCGCATGACAACGAACATGGCCCCTGTCTATAGTGCCATCAGTCGGCCGCATGACTTGGCCGGGGCGCCGTCGCTGCGCTACCATCCGACTCCCCAACGCACTCCAGCCAGGATGACGCGATGAACCGAGTGTTGTACCCGGG  >  NC_002947/5844965‑5845112                                                                                                                                                                                                                                                                                                             CTGGCTGGAGTGCGTTGGGGAGTCGGATGGTAGCGCAGCGACGGCGCCCCGGCCAAGTCATGCGGCCGACTGATGGCACTATAGACAGGGGCCATGTTCGTTGTCATGCGCTGTGTGCCAGGCGGCTGACCAGTGCTTCGCTGAGCCTG                                                                                                                                                        >  4:165672/1‑149                  GGGAGTCGGATGGTAGCGCAGCGACGGCGCCCCGGCCAAGTCATGCGGCCGACTGATGGCACTATAGACAGGGGCCATGTTCGTTGTCATGCGCTGTGTGCCAGGCGGCTGACCAGTGCTTCGCTGAGC                                                                                                                                                           <  1:13151/129‑1                  GGGAGTCGGATGGTAGCGCAGCGACGGCGCCCCGGCCAAGTCATGCGGCCGACTGATGGCACTATAGACAGGGGCCATGTTCGTTGTCATGCGCTGTGTGCCAGGCGGCTGACCAGTGCTTCGCTGAGC                                                                                                                                                           >  2:13151/1‑129                                                                                                                      CCAGGCGGCTGACCAGTGCTTCGCTGAGCCTGGCACACAGCGCATGACAACGAACATGGCCCCTGTCTATAGTGCCATCAGTCGGCCGCATGACTTGGCCGGGGCGCCGTCGCTGCGCTACCATC                                                           >  6:348745/1‑125                                                                                                                         GGCGGCTGACCAGTGCTTCGCTGAGCCTGGCACACAGCGCATGACAACGAACATGGCCCCTGTCTATAGTGCCATCAGTCGGCCGCATGACTTGGCCGGGGCGCCGTCGCTGCGC                                                                  <  7:78014/115‑1                                                                                                                         GGCGGCTGACCAGTGCTTCGCTGAGCCTGGCACACAGCGCATGACAACGAACATGGCCCCTGTCTATAGTGCCATCAGTCGGCCGCATGACTTGGCCGGGGCGCCGTCGCTGCGC                                                                  >  8:78014/1‑115                                                                                                                                                    TGGCACACAGCGCATGACAACGAACATGGCCCCTGTCTATAGTGCCATCAGTCGGCCGCATGACTTGGCCGGGGCGCCGTCGCTGCGCTACCATCCGACTCCCCAACGCACTCCAGCCAGGATGACGCGATGAACCGAGTGTTGTACCC     >  5:297734/1‑149                                                                                                                                                      GCACACAGCGCATGACAACGAACATGGCCCCTGTCTATAGTGCCATCAGTCGGCCGCATGACTTGGCCGGGGCGCCGTCGCTGCGCTACCATCCGACTCCCCAACGCA                                            >  4:291014/1‑108                                                                                                                                                       CACACAGCGCATGACAACGAACATGGCCCCTGTCTATAGTGCCATCAGTCGGCTGCATGACTTGGCCGGGGCGCCGTCGCTGCGCTACCATCCGACTCCCCAACGCACTCCAGCCAGGATGACGCGATGAACCGAGTGTTGTACCCGGG  <  5:162522/149‑1                                                                                                                                                                                                                                                                                                             CTGGCTGGAGTGCGTTGGGGAGTCGGATGGTAGCGCAGCGACGGCGCCCCGGCCAAGTCATGCGGCCGACTGATGGCACTATAGACAGGGGCCATGTTCGTTGTCATGCGCTGTGTGCCAGGCGGCTGACCAGTGCTTCGCTGAGCCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5845080‑5844930 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctggcACACAGCGCATGACAACGAACATGGCCCCTGTCTATAGTGCCATCAGTCGGCCGCATGACTTGGCCGGGGCGCCGTCGCTGCGCTACCATCCGACTCCCCAACGCACTCCAGCCAGGATGACGCGATGAACCGAGTGTTGTACCCGGG  >  NC_002947/5844965‑5845112

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.