New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5844930 =54 (1.020)3 (0.060) 3/240 NT 5.9% coding (1552/1599 nt) PP_5122 GMC family oxidoreductase
?NC_002947 5844965 = 45 (0.900)coding (1587/1599 nt) PP_5122 GMC family oxidoreductase

CGGCTGCGCCCTCGGCGAAGACCCGCGCCACGCGGTGTGCGACAGCCTGGGCCGCCATCACCAGCTGGAAAACCTGTCGATTCACGACGGTTCACTGTTCCCCACCAGCATCGGCGCCAACCCGCAATTGTCGGTGTATGCCATCAGCGCCAGGCTCAGCGAAGCACTGGTCAGCCGCCTGGCACACAGCGCATGACAACGAACATGGCCCCTGTCTATAGTGCCATCAGTCGGCCGCATGACTTGGCCGGGGCGCCGTCGCTGCGCTACCATCCGACTCCCCAACGCACTCCAG  >  NC_002947/5844782‑5845076
                                                                                                                                                    |                                                                                                                                                  
cccgggtacaacactcggttcatcgcgtcatcctggctggagtgcgttggggagtcggatggtagcgcagcgacggcgccccggccaagtcatgcagccgactgatggcactatagacaggggccatgttcgttgtcatgcgctgtgtg                                                                                                                                                    <  5:162522‑M1/1‑1 (MQ=255)
   gggtacaacactcggttcatcgcgtcatcctggctggagtgcgttggggagtcggatggtagcgcagcgacggcgccccggccaagtcatgcggccgactgatggcactatagacaggggccatgttcgttgtcatgcgctgtgtGCCa                                                                                                                                                 >  5:297734‑M1/146‑149 (MQ=255)
       gcCCTCGGCGAAGACCCGCGCCACGCGGTGTGCGACAGCCTGGGCCGCCATCACCAGCTGGAAAACCTGTCGATTCACGACGGTTCACTGTTCCCCACCAGCATCGGCGCCAACCCGCAATTGTCGGTGTATGCCATCAGCGCCAGGCt                                                                                                                                             >  3:81419/1‑149 (MQ=255)
         ccTCGGCGAAGACCCGCGCCACGCGGTGTGCGACAGCCTGGGCCGCCATCACCAGCTGGAAAACCTGTCGATTCACGACGGTTCACTGTTCCCCACCAGCATCGGCGCCAACCCGCAATTGTCGGTGTATGCCATCAGCGCCAGGCt                                                                                                                                             >  3:339659/1‑147 (MQ=255)
          cTCGGCGAAGACCCGCGCCACGCGGTGTGCGACAGCCTGGGCCGCCATCACCAGCTGGAAAACCTGTCGATTCACGACGGTTCACTGTTCCCCACCAGCATCGGCGCCAACCCGCAATTGTCGGTGTATGCCATCAGCGCCAGGCTCAg                                                                                                                                          <  4:339659/149‑1 (MQ=255)
              gCGAACACCCGCGCCACGCGCTGTGCGACAGCCTGGGCCCCCATCACCAGCTGGAAAACCTGACCAATCACGACGGTTCACTGTTCCCCACCAGCATCGGCGCCAACCCGCAATTGTCGCTGTATCCCATCACCGCCAGGCTCAGCg                                                                                                                                        >  4:57920/1‑147 (MQ=255)
               cGAAGACCCGCGCCACGCGGTGTGCGACAGCCTGGGCCGCCATCACCAGCTGGAAAACCTGTCGATTCACGACGGTTCACTGTTCCCCACCAGCATCGGCGCCAACCCGCAATTGTCGGTGTATGCCATCAGCGCCAGGCTCAGCGAAg                                                                                                                                     <  4:57997/149‑1 (MQ=255)
                   gACCCGCGCCACGCGGTGTGCGACAGCCTGGGCCGCCATCACCAGCTGGAAAACCTGTCGATTCACGACGGTTCACTGTTCCCCACCAGCATCGGCGCCAACCCGCAATTGTCGGTGTATGCCATCAGCGCCAGGCTCAGCGAAGCACt                                                                                                                                 >  3:339337/1‑149 (MQ=255)
                                  gtgtGCGACAGCCTGGGCCGCCATCACCAGCTTGAAAACCTGTCGATTCACGACGGTTCACTGTTCCCCACCAGCATCGGCGCCAACCCGCAATTGTCGGTGTATGCCATCAGCGCCAGGCTCAGCGAAGCACTGGTCAGCCGCCTGGc                                                                                                                  <  6:118223/149‑1 (MQ=255)
                                   tgtgCGACAGCCTGGGCCGCCATCACCAGCTGGAAAACCTGTCGATTCACGACGGTTCACTGTTCCCCACCAGCATCGGCGCCAACCCGCAATTGTCGGTGTATGCCATCAGCGCCAGGCTCAGCGAAGCACTGGTCAGCCGCCTGGca                                                                                                                 <  4:81419/149‑1 (MQ=255)
                                        gccAGCCTGGGCCGCCATCACCAGCTGGAAAACCTGTCGATTCACGACGGTTCACTGTTCCCCACCAGCATCGGCGCCAACCCGCAATTGTCGGTGTATGCCATCAGCGCCAGGCTCAGCGAAGCACTGGTCAGCCGCCTGGCACACAg                                                                                                            >  5:250524/3‑149 (MQ=255)
                                         aCAGCCTGGGCCGCCATCACCAGCTGGAAAACCTGTCGATTCACGACGGTTCACTGTTCCCCACCAGCATCGGCGCCAACCCGCAATTGTCGGTGTATGCCATCAGCGCCAGGCTCAGCGAAGCACTGGTCAGCCGCCTGGCACACAgc                                                                                                           >  4:113376/1‑149 (MQ=255)
                                          tgcgttggggagtcggatggtagcgcagcgacggcgccccggccaagtcatgcggccgactgatggcactatagacaggggccatgttcgttgtcatgcgctgtgtGc                                                                                                                                                   >  4:291014‑M1/107‑108 (MQ=255)
                                            gCCTGGGCCGCCATCACCAGCTGTAAAACCTGGCGATTCACGACGGATCACTGTTCCCCACCAGCATCGGCGCCAACCCGCAATTGTCGGTGTATGCCATCAGCGCCAGGCTCAGCGAAGCACTGGTCAGCCGCCTGGCACACAGCGCa                                                                                                        <  6:250524/149‑1 (MQ=255)
                                             ccTGGGCCGCCATCACCAGCTGGAAAACCTGTCGATTCACGACGGTTCACTGTTCCCCACCAGCATCGGCGCCAACCCGCAATTGTCGGTGTATGCCATCAGCGCCAGGCTCAGCGAAGCACTGGTCAGCCGCCTg                                                                                                                    <  2:236018/136‑1 (MQ=255)
                                             ccTGGGCCGCCATCACCAGCTGGAAAACCTGTCGATTCACGACGGTTCACTGTTCCCCACCAGCATCGGCGCCAACCCGCAATTGTCGGTGTATGCCATCAGCGCCAGGCTCAGCGAAGCACTGGTCAGCCGCCTg                                                                                                                    >  1:236018/1‑136 (MQ=255)
                                                 ggCCGCCATCACCAGCTGGAAAACCTGTCGATTCACGACGGTTCACTGTTCCCCACCAGCATCGGCGCCAACCCGCAATTGTCGGTGTATGCCATCAGCGCCAGGCTCAGCGAAGCACTGGTCAGCCGCCTGGCACACAGCGCATGAc                                                                                                    <  3:57920/148‑1 (MQ=255)
                                                   ccgccATCACCAGCTGGAAAACCTGTCGATTCACGACGGTTCACTGTTCCCCACCAGCATCGGCGCCAACCCGCAATTGTCGGTGTATGCCATCAGCGCCAGGCTCAGCGAAGCACTGGt                                                                                                                              <  8:88723/120‑1 (MQ=255)
                                                   ccgccATCACCAGCTGGAAAACCTGTCGATTCACGACGGTTCACTGTTCCCCACCAGCATCGGCGCCAACCCGCAATTGTCGGTGTATGCCATCAGCGCCAGGCTCAGCGAAGCACTGGt                                                                                                                              >  7:88723/1‑120 (MQ=255)
                                                   ccgccATCACCAGCTGGAAAACCTGTCGATTCACGACGGTTCACTGTTCCCCACCAGCATCGGCGCCAACCCGCAATTGTCGGTGTATGCCATCAGCGCCAGGCTCAGCGAAGCACTGGTCAGCCGCCTg                                                                                                                    >  6:201352/1‑130 (MQ=255)
                                                   ccgccATCACCAGCTGGAAAACCTGTCGATTCACGACGGTTCACTGTTCCCCACCAGCATCGGCGCCAACCCGCAATTGTCGGTGTATGCCATCAGCGCCAGGCTCAGCGAAGCACTGGTCAGCCGCCTg                                                                                                                    <  5:201352/130‑1 (MQ=255)
                                                      ccATCACCAGCTGGAAAACCTGTCGATTCACGACGGTTCACTGTTCCCCACCAGCATCGGCGCCAACCCGCAATTGTCGGTGTATGCCATCAGCGCCa                                                                                                                                                 <  7:20312/98‑1 (MQ=255)
                                                      ccATCACCAGCTGGAAAACCTGTCGATTCACGACGGTTCACTGTTCCCCACCAGCATCGGCGCCAACCCGCAATTGTCGGTGTATGCCATCAGCGCCa                                                                                                                                                 >  8:20312/1‑98 (MQ=255)
                                                      ccATCACCAGCTGGAAAACCTGTCGATTCACGACGGTTCACTGTTCCCCACCAGCATCGGCGCCAACCCGCAATTGTCGGTGTATGCCATCAGCGCCAGGCTCAGCGAAGCACTGGTCAGCCGCCTGGCACACAGCGCATGACAACGaa                                                                                              <  4:339337/149‑1 (MQ=255)
                                                         gatggtagcgcagcgacggcgccccggccaagtcatgcggccgactgatggcactatagacaggggccatgttcgttgtcatgcgctgtgtGCCAGGCTCAGCGAAGCACTGGTCAGCCGCCTgg                                                                                                                   >  6:348745‑M1/92‑125 (MQ=255)
                                                          cACCAGCTGGAAAACCTGTCGATTCACGACGGTTCACTGTTCCCCACCAGCATCGGCGCCAACCCGCAATTGTCGGTGTATGCCATCAGCGCCAGGCTCAGCGAAGCACTGGTCAGCCGCCTGGCACACAgcgc                                                                                                         >  4:115719/1‑134 (MQ=255)
                                                          cACCAGCTGGAAAACCTGTCGATTCACGACGGTTCACTGTTCCCCACCAGCATCGGCGCCAACCCGCAATTGTCGGTGTATGCCATCAGCGCCAGGCTCAGCGAAGCACTGGTCAGCCGCCTGGCACACAgcgc                                                                                                         <  3:115719/134‑1 (MQ=255)
                                                           aCCAGCTGGAAAACCTGTCGATTCACGACGGTTCACTGTTCCCCACCAGCATCGGCGCCAACCCGCAATTGTCGGTGTATGCCATCAGCGCCAGGCTCAGCGAAGCACTGGTCAGCCGCCTGGCACACAGCGCATGACAACGAACATgg                                                                                         <  1:25950/149‑1 (MQ=255)
                                                            ccAGCTGGAAAACCTGTCGATTCACGACGGTTCACTGTTCCCCACCAGCATCGGCGCCAACCCGCAATTGTCGGTGTATGCCATCAGCGCCAGGCTCAGCGAAGCACTGGTCAGCCGCCTGGCACACAGCGCATGACAACGAACATGGc                                                                                        >  3:218845/1‑149 (MQ=255)
                                                                gcgcagcgacggcgccccggccaagtcatgcggccgactgatggcactatagacaggggccatgttcgttgtcatgcgctgtgtGCCAGGCTCAGCGAAGCACTGGTCAgccgcc                                                                                                                      <  7:78014‑M1/31‑1 (MQ=255)
                                                                gcgcagcgacggcgccccggccaagtcatgcggccgactgatggcactatagacaggggccatgttcgttgtcatgcgctgtgtGCCAGGCTCAGCGAAGCACTGGTCAgccgcc                                                                                                                      >  8:78014‑M1/85‑115 (MQ=255)
                                                                cTGGAAAACCTGTCGATTCACGACGGTTCACTGTTCCCCACCAGCATCGGCGCCAACCCGCAATTGTCGGTGTATGCCATCAGCGCCAGGCTCAGCGAAGCACTGGTCAGCCGCCTGGCACACAGCGCATGACAACGAACATGGCCCCt                                                                                    <  3:113376/149‑1 (MQ=255)
                                                                   gAAAACCTGTCGATTCACGACGGTTCACTGTTCCCCACCAGCATCGGCGCCAACCCGCAATTGTCGGTGTATGCCATCAGCGCCAGGCTCAGCg                                                                                                                                        <  6:111687/94‑1 (MQ=255)
                                                                   gAAAACCTGTCGATTCACGACGGTTCACTGTTCCCCACCAGCATCGGCGCCAACCCGCAATTGTCGGTGTATGCCATCAGCGCCAGGCTCAGCg                                                                                                                                        >  5:111687/1‑94 (MQ=255)
                                                                     aaaCCTGTCGATTCACGACGGTTCACTGTTCCCCACCAGCATCGGCGCCAACCCGCAATTGTCGGTGTATGCCATCAGCGCCAGGCTCAGCGAAGCACTGGTCAGCCGCCTGGCACACAGCGCATGACAACGAACATGGCCCCTGTCta                                                                               <  4:218845/149‑1 (MQ=255)
                                                                              gATTCACGACGGTTCACTGTTCCCCACCAGCATCGGCGCCAACCCGCAATTGTCGGTGTATGCCATCAGCGCCAGGCTCAGCGAAGCACTGGTCAGCCGCCTGGCACACAGCGCATGACAAc                                                                                                 >  3:15864/1‑122 (MQ=255)
                                                                              gATTCACGACGGTTCACTGTTCCCCACCAGCATCGGCGCCAACCCGCAATTGTCGGTGTATGCCATCAGCGCCAGGCTCAGCGAAGCACTGGTCAGCCGCCTGGCACACAGCGCATGACAAc                                                                                                 <  4:15864/122‑1 (MQ=255)
                                                                              gATTCACGACGGTTCACTGTTCCCCACCAGCATCGGCGCCAACCCGCAATTGTCGGTGTATGCCATCAGCGCCAGGCTCAGCGAAGCACTGGTCAGCCGCCTGGCACACAGCGCATGACAACGAACATGGCCCCTGTCTATAGTGcc                                                                        <  8:247538/147‑1 (MQ=255)
                                                                              gATTCACGACGGTTCACTGTTCCCCACCAGCATCGGCGCCAACCCGCAATTGTCGGTGTATGCCATCAGCGCCAGGCTCAGCGAAGCACTGGTCAGCCGCCTGGCACACAGCGCATGACAACGAACATGGCCCCTGTCTATAGTGCCaa                                                                      >  7:247538/1‑148 (MQ=255)
                                                                                         gTTCACTGTTCCCCACCAGCATCGGCGCCAACCCGCAATTGTCGGTGTATGCCATCAGCGCCAGGCTCAGCGAAGCACTGGTCAGCCGCCTGGCACACAGCGCATGACAACGAACATGGcc                                                                                       >  5:151543/1‑121 (MQ=255)
                                                                                         gTTCACTGTTCCCCACCAGCATCGGCGCCAACCCGCAATTGTCGGTGTATGCCATCAGCGCCAGGCTCAGCGAAGCACTGGTCAGCCGCCTGGCACACAGCGCATGACAACGAACATGGcc                                                                                       <  6:151543/121‑1 (MQ=255)
                                                                                          ttCACTGTTCCCCACCAGCATCGGCGCCAACCCGCAATTGTCGGTGTATGCCATCAGCGCCAGGCTCAGCGAAGCACTGGTCAGCCGCCTGGCACACAGCGCATGACAACGAACATGGCCCCTGTCTATAGTGCCATCAGTCGGCCGCa                                                          >  4:311871/1‑149 (MQ=255)
                                                                                          ttCACTGTTCCCCACCAGCATCGGCGCCAACCCGCAATTGTCGGTGTATGCCATCAGCGCCAGGCTCAGCGAAGCACTGGTCAGCCGCCTGGCACACAGCGCATGACAACGAACATGGCCCCTGTCTATAGTGCCATCAGTCGGCCGCa                                                          >  1:55290/1‑149 (MQ=255)
                                                                                              cTGTTCCCCACCAGCATCGGCGCCAACCCGCAATTGTCGGTGTATGCCATCAGCGCCAGGCTCAGCGAAGCACTGGTCAGCCGCCTGGCACACAGCGCATGACAACGAACATGGCCCCTGTCTATAGTGCCATCa                                                                    <  3:291922/135‑1 (MQ=255)
                                                                                              cTGTTCCCCACCAGCATCGGCGCCAACCCGCAATTGTCGGTGTATGCCATCAGCGCCAGGCTCAGCGAAGCACTGGTCAGCCGCCTGGCACACAGCGCATGACAACGAACATGGCCCCTGTCTATAGTGCCATCa                                                                    >  4:291922/1‑135 (MQ=255)
                                                                                                      caccaGCATCGGCGCCAACCCGCAATTGTCGGTGTATGCCATCAGCGCCAGGCTCAGCGAAGCACTGGTCAGCCGCCTGGCACACAGCGCATGACAACGAACATGGCCCCTGTCTATAGTGCCATCAGTCGGCCGCATGACTTGGCCgg                                              >  3:77392/1‑149 (MQ=255)
                                                                                                       accaGCATCGGCGCCAACCCGCAATTGTCGGTGTATGCCATCAGCGCCAGGCTCAGCGAAGCACTGGTCAGCCGCCTGGCACACAGCGCATGACAACGAACATGGCCCCTGTCTATAGTGCCATCAGTCGGCCGCATGACTTGGCCggg                                             <  3:311871/149‑1 (MQ=255)
                                                                                                       accaGCATCGGCGCCAACCCGCAATTGTCGGTGTATGCCATCAGCGCCAGGCTCAGCGAAGCACTGGTCAGCCGCCTGGCACACAGCGCATGACAACGAACATGGCCCCTGTCTATAGTGCCATCAGTCGGCCGCATGACTTGGCCggg                                             <  8:186266/149‑1 (MQ=255)
                                                                                                             aTCGGCGCCAACCCGCAATTGTCGGTGTATGCCATCAGCGCCAGGCTCAGCGAAGCACTGGTCAGCCGCCTGGCACACAGCGCATGACAACGAACATGGCCCCTGTCTATAGTGCCATCAGTCGGCCGCATGACTTGGCCGGGGCGCCg                                       >  6:296452/1‑149 (MQ=255)
                                                                                                               ccgcgcAAACACGCAATTGTAGTTGTATCCCATCAGCGCCAGGCTCATAGAACCACTGGTCAGCCGCCTGGAACACAGCGCATGACAACGAACATGTACAATGTCTATAGTGCCATCAGTCGGATGAAAGACTTGGACGGGTCGCCGTc                                     >  6:162522/3‑149 (MQ=255)
                                                                                                                 gcgcCAACCCGCAATTGTCGGTGTATGCCATCAGCGCCAGGCTCAGCGAAGCACTGGTCAGCCGCCTGGCACACAGCGCATGa                                                                                                     <  8:245816/83‑1 (MQ=255)
                                                                                                                 gcgcCAACCCGCAATTGTCGGTGTATGCCATCAGCGCCAGGCTCAGCGAAGCACTGGTCAGCCGCCTGGCACACAGCGCATGa                                                                                                     >  7:245816/1‑83 (MQ=255)
                                                                                                                          cGCAATTGTCGGTGTATGCCATCAGCGCCAGGCTCAGCGAAGCACTGGTCAGCCGCCTGGCACACAGCGCATGACAACGAAc                                                                                             >  8:265605/1‑82 (MQ=255)
                                                                                                                                 gTCGGTGTATGCCATCAGCGCCAGGCTCAGCGAAGCACTGGTCAGCCGCCTGGCACACAGCGCATGACAACGAACATGGCCCCTGTCTATAGTGCCATCAGTCGGCCGCATGACTTGGCCGGGGCGCCGTCGCTGCGCTACCATCCGa                    <  2:55290/148‑1 (MQ=255)
                                                                                                                                  tCGGTGTATGCCATCAGCGCCAGGCTCAGCGAAGCACTGGTCAGCGGCCTGGCACACAGCGCATGACAACGAACATGGCCCCTGTCTATAGTGCCATCAGTCGGCCGCATGACTTGGCCGGGGCGCCGTCGCTGCGCTACCATCCGACt                  >  1:247475/1‑149 (MQ=255)
                                                                                                                                  tCGGTGTATGCCATCAGCGCCAGGCTCAGCGAAGCACTGGTCAGCCGCCTGGCACACAGCGCATGACAACGAACATGGCCCCTGTCTATAGTGCCATCAGTCGGCCGCATGACTTGGCCGGGGCGCCGTCGCTGCGCTACCATCCGACt                  >  7:319599/1‑149 (MQ=255)
                                                                                                                                  tCGGTGTATGCCATCAGCGCCAGGCTCAGCGAAGCACTGGTCAGCCGCCTGGCACACAGCGCATGACAACGAACATGGCCCCTGTCTATAGTGCCATCAGTCGGCCGCATGACTTGGCCGGGGCGCCGTCGCTGCGCTACCATCCGACt                  >  3:165672/1‑149 (MQ=255)
                                                                                                                                    ggTGTATGCCATCAGCGCCAGGCTCAGCGAAGCACTGGTCAGCCGCCTGGCACACAGCGCATGACAACGAACATGGCCCCTGTCTATAGTGCCATCAGTCGGCCGCATGACTTGGCCGGGGCGCCGTCGCTGCGCTACCATCCGACTcc                >  7:318712/1‑149 (MQ=255)
                                                                                                                                        tATGCCATCAGCGCCAGGCTCAGCGAAGCACTGGTCAGCCGCCTGGCACACAGCGCATGACAACGAACATGGCCCCTGTCTATAGTGCCATCAGTCGGCCGCATGACTTGGCCGGGGCGCCGTCGCTGCGCTAc                           <  7:250290/134‑1 (MQ=255)
                                                                                                                                        tATGCCATCAGCGCCAGGCTCAGCGAAGCACTGGTCAGCCGCCTGGCACACAGCGCATGACAACGAACATGGCCCCTGTCTATAGTGCCATCAGTCGGCCGCATGACTTGGCCGGGGCGCCGTCGCTGCGCTAc                           >  8:250290/1‑134 (MQ=255)
                                                                                                                                        tATGCCATCAGCGCCAGGCTCAGCGAAGCACTGGTCAGCCGCCTGGCACACAGCGCATGACAACGAACATGGCCCCTGTCTATAGTGCCATCAGTCGGCCGCATGACTTGGCCGGGGCGCCGTCGCTGCGCTACCATCCGACTCCCCaa            >  6:94561/1‑149 (MQ=255)
                                                                                                                                             cATCAGCGCCAGGCTCAGCGAAGCACTGGTCAGCCGCCTGGCACACAGCGCATGACAACGAACATGGCCCCTGTCTATAGTGCCATCAGTCGGCCGCATGACTTGGCCGGGGCGCCGTCGCTGCGCTACCATCCGACTCCCCAACGCAc       >  6:333844/1‑149 (MQ=255)
                                                                                                                                                  gcgcCAGGCTCAGCGAAGCACTGGTCAGCCGCCTGGCACACAGCGCATGACAACGAACATGGCCCCTGTCTATAGTGCCATCAGTCGGCCGCATGACTTGGCCGGGGCGCCGTCGCTGCGCTACCATCCGACTCCCCAACGCACTccag  >  4:266629/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                  
CGGCTGCGCCCTCGGCGAAGACCCGCGCCACGCGGTGTGCGACAGCCTGGGCCGCCATCACCAGCTGGAAAACCTGTCGATTCACGACGGTTCACTGTTCCCCACCAGCATCGGCGCCAACCCGCAATTGTCGGTGTATGCCATCAGCGCCAGGCTCAGCGAAGCACTGGTCAGCCGCCTGGCACACAGCGCATGACAACGAACATGGCCCCTGTCTATAGTGCCATCAGTCGGCCGCATGACTTGGCCGGGGCGCCGTCGCTGCGCTACCATCCGACTCCCCAACGCACTCCAG  >  NC_002947/5844782‑5845076

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.