| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5926012 = | 41 (0.780) | 4 (0.080) | 4/246 | NT | 8.6% | coding (133/1083 nt) | gcvT‑II | aminomethyltransferase |
| ? | NC_002947 | 5926051 = | 45 (0.880) | coding (94/1083 nt) | gcvT‑II | aminomethyltransferase | |||||
GGAAGGAGAAACCCATGGGACAGCGCACGCTTTTGTATGACCTGCACCTGGCGCTAGGCGCCAAGACGGTCGATTTCGGTGGCTGGGACATGCCCCTGCACTATGGCTCGCAGGTCGAGGAGCACCATCAGGTGCGCAGCGATTGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5926158‑5926012‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcgAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTCCCATG > NC_002947/5926051‑5926145 GGAAGGAGAAACCCATGGGACAGCGCACGCTTTTGTATGACCTGCACCTGGCGCTAGGCGCCAAGACGGTCGATTTCGGTGGCTGGGACATGCCCCTGCACTATGGCTCGCAGGTCGAGGAGCACCATCAGGTGCGCAGCGATTGCG < 1:89849/147‑1GGAAGGAGAAACCCATGGGACAGCGCACGCTTTTGTATGACCTGCACCTGGCGCTAGGCGCCAAGACGGTCGATTTCGGTGGCTGGGACATGCCCCTGCACTATGGCTCGCAGGTCGAGGAGCACCATCAGGTGCGCAGCGATTGCG > 2:89849/1‑147 TATGGCTCGCAGGTCGAGGAGCACCATCAGGTGCGCAGCGATTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTCCCATG > 7:327674/1‑141 TATGGCTCGCAGGTCGAGGAGCACCATCAGGTGCGCAGCGATTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTCCCATG < 8:327674/141‑1 CTCGCAGGTCGAGGAGCACCATCAGGTGCGCAGCGATTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAA < 1:7133/118‑1 CTCGCAGGTCGAGGAGCACCATCAGGTGCGCAGCGATTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAA > 2:7133/1‑118 GCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCA < 7:293230/74‑1 GCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCA > 8:293230/1‑74 GGAAGGAGAAACCCATGGGACAGCGCACGCTTTTGTATGACCTGCACCTGGCGCTAGGCGCCAAGACGGTCGATTTCGGTGGCTGGGACATGCCCCTGCACTATGGCTCGCAGGTCGAGGAGCACCATCAGGTGCGCAGCGATTGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5926158‑5926012‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcgAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTCCCATG > NC_002947/5926051‑5926145 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |