| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5926012 = | 41 (0.780) | 4 (0.080) | 4/246 | NT | 8.6% | coding (133/1083 nt) | gcvT‑II | aminomethyltransferase |
| ? | NC_002947 | 5926051 = | 45 (0.880) | coding (94/1083 nt) | gcvT‑II | aminomethyltransferase | |||||
AGCAGCGGGCTATACAGCGCCTTGCCGGGGTCGTCGAGGCGGGCCACGTCGTTGGCCAGCAGGCGCTGCAGCCAAACTGTGGCATCAGTGCCGTCGACATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTCCCATGGGTTTCTCCTTCC > NC_002947/5925879‑5926158 | agcagcGGGCTATACAGCGCCTTGCCGGGGTCGTCGAGGCGGGCCACGTCGTTGGCCAGCAGGCGCTGCAGCCAAACTGTGGCATCAGTGCCGTCGACATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCAc > 2:203461/1‑149 (MQ=255) agcGGGCTATACAGCGCCTTGCCGGGGTCGTCGAGGCGGGCCACGTCGTTGGCCAGCAGGCGCTGCAGCCAAACTGTGGCATCAGTGCCGTCGACATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTgc > 8:323300/1‑142 (MQ=255) agcGGGCTATACAGCGCCTTGCCGGGGTCGTCGAGGCGGGCCACGTCGTTGGCCAGCAGGCGCTGCAGCCAAACTGTGGCATCAGTGCCGTCGACATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTgc < 7:323300/142‑1 (MQ=255) gCTATACGGCGCCTTGCCGGGGTCGTCGAGGCGGGCCACGTCGTTGGCCAGCAGGCGCTGCAGCCAAACTGTGGCATCAGTGCCGTCGACATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATgg < 8:9193/148‑1 (MQ=255) gCTATACGGCGCCTTGCCGGGGTCGTCGAGGCGGGCCACGTCGTTGGCCAGCAGGCGCTGCAGCCAAACTGTGGCATCAGTGCCGTCGACATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATgg > 7:9193/1‑148 (MQ=255) tataCAGCGCCTTGCCGGGGTCGTCGAGGCGGGCCACGTCGTTGGCCAGCAGGCGCTGCAGCCAAACTGTGGCATCAGTGCCGTCGACATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGc > 3:294347/1‑149 (MQ=255) cTTGCCGGGGTCGTCGAGGCGGGCCACGTCGTTGGCCAGCAGGCGCTGCAGCCAAACTGTGGCATCAGTGCCGTCGACATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCt > 5:126265/1‑149 (MQ=255) ccGGGGTCGTCGAGGCGGGCCACGTCGTTGGCCAGCAGGCGCTGCAGCCAAACTGTGGCATCAGTGCCGTCGACATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGc > 3:181985/1‑147 (MQ=255) gggTCGTCGAGGCGGGCCACGTCGTTGGCCAGCAGGCGCTGCAGCCAAACTGTGGCATCAGTGCCGTCGACATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGcc < 6:126265/149‑1 (MQ=255) gtcgtcGAGGCGGGCCACGTCGTTGGCCAGCAGGCGCTGCAGCCAAACTGTGGCATCAGTGCCGTCGACATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCa > 2:18901/1‑148 (MQ=255) tcgtcgAGGCGGGCCACGTCGTTGGCCAGCAGGCGCTGCAGCCAAACTGTGGCATCAGTGCCGTCGACATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACTTGATGGTGCTCCTCGACCTGCGAGCCATa < 1:203461/149‑1 (MQ=255) tcgAGGCGGGCCACGTCGTTGGCCAGCAGGCGCTGCAGCCAAACTGTGGCATCAGTGCCGTCGACATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTg > 3:164144/1‑149 (MQ=255) tcgAGGCGGGCCACGTCGTTGGCCAGCAGGCGCTGCAGCCAAACTGTGGCATCAGTGCCGTCGACATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTg < 3:177289/149‑1 (MQ=255) ggCGGGCCACGTCGTTGGCCAGCAGGCGCTGCAGCCAAACTGTGGCATCAGTGCCGTCGACATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGa < 4:228241/129‑1 (MQ=255) ggCGGGCCACGTCGTTGGCCAGCAGGCGCTGCAGCCAAACTGTGGCATCAGTGCCGTCGACATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGa > 3:228241/1‑129 (MQ=255) ggCGGGCCACGTCGTTGGCCAGCAGGCGCTGCAGCCAAACTGTGGCATCAGTGCCGTCGACATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAgg < 1:18901/149‑1 (MQ=255) catgggacagcgcacgcttttgtatgacctgcacctggcgctaggcgccaagacggtcgatttcggtggctgggacatgcccctgcactatggctCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATa > 7:327674‑M1/96‑141 (MQ=255) catgggacagcgcacgcttttgtatgacctgcacctggcgctaggcgccaagacggtcgatttcggtggctgggacatgcccctgcactatggctCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATa < 8:327674‑M1/46‑1 (MQ=255) ggCCACGTCGTTGGCCAGCAGGCGCTGCAGCCAAACTGTGGCATCAGTGCCGTCGACATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAg < 3:69567/144‑1 (MQ=255) ggCCACGTCGTTGGCCAGCAGGCGCTGCAGCCAAACTGTGGCATCAGTGCCGTCGACATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAg > 4:69567/1‑144 (MQ=255) gCCACGTCGTTGGCCAGCAGGCGCTGCAGCCAAACTGTGGCATCAGTGCCGTCGACATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCAt > 4:317205/1‑149 (MQ=255) gtcgtTGGCCAGCAGGCGCTGCAGCCAAACTGTGGCATCAGTGCCGTCGACATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAgg < 2:194302/139‑1 (MQ=255) gtcgtTGGCCAGCAGGCGCTGCAGCCAAACTGTGGCATCAGTGCCGTCGACATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAgg > 1:194302/1‑139 (MQ=255) tttgtatgacctgcacctggcgctaggcgccaagacggtcgatttcggtggctgggacatgcccctgcactatggctCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAg > 2:7133‑M1/78‑118 (MQ=255) tttgtatgacctgcacctggcgctaggcgccaagacggtcgatttcggtggctgggacatgcccctgcactatggctCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAg < 1:7133‑M1/41‑1 (MQ=255) cagcagGCGCTGCAGCCAAACTGTGGCATCAGTGCCGTCGACATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCg > 7:67548/1‑148 (MQ=255) cagcagGCGCTGCAGCCAAACTGTGGCATCAGTGCCGTCGACATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCg > 7:54917/1‑148 (MQ=255) tgacctgcacctggcgctaggcgccaagacggtcgatttcggtggctgggacatgcccctgcactatggctCGc > 8:293230‑M1/72‑74 (MQ=255) tgacctgcacctggcgctaggcgccaagacggtcgatttcggtggctgggacatgcccctgcactatggctCGc < 7:293230‑M1/3‑1 (MQ=255) gcgcTGCAGCCAAACTGTGGCATCAGTGCCGTCGACATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGa < 4:294347/149‑1 (MQ=255) aGCCAAACTGTGGCATCAGTGCCGTCGACATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCtt > 2:169413/1‑149 (MQ=255) ccAAACTGTGGCATCAGTGCCGTCGACATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTgg < 4:181985/149‑1 (MQ=255) aGTGCCGTCGACATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGGCTTGGCGCTAGGCGCCaaga < 5:274549/149‑4 (MQ=255) ccGTCGACATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAg < 3:317205/149‑1 (MQ=255) gTCGACATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGt < 4:164144/149‑1 (MQ=255) gTCGACATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGt < 8:67548/149‑1 (MQ=255) cGACATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCtt < 4:77657/124‑1 (MQ=255) cGACATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCtt > 3:77657/1‑124 (MQ=255) gACATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCa > 7:177473/1‑148 (MQ=255) cATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATAc < 8:177473/149‑1 (MQ=255) gATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACaaa < 8:54917/148‑1 (MQ=255) tCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAgc > 8:327956/1‑119 (MQ=255) tCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAgc < 7:327956/119‑1 (MQ=255) tGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATa < 6:333197/131‑1 (MQ=255) tGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATa > 5:333197/1‑131 (MQ=255) tGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTc < 1:169413/148‑1 (MQ=255) aTCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAg > 4:319262/1‑111 (MQ=255) gccgcAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTCCCATGGGTTTCTCCTTcc > 7:67602/1‑149 (MQ=255) ccgcAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTcc > 1:239577/1‑131 (MQ=255) ccgcAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTcc < 2:239577/131‑1 (MQ=255) CGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTCCCATGGGTTTCTCCTTcc > 2:89849‑M1/1‑147 (MQ=255) CGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTCCCATGGGTTTCTCCTTcc < 1:89849‑M1/147‑1 (MQ=255) | AGCAGCGGGCTATACAGCGCCTTGCCGGGGTCGTCGAGGCGGGCCACGTCGTTGGCCAGCAGGCGCTGCAGCCAAACTGTGGCATCAGTGCCGTCGACATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTCCCATGGGTTTCTCCTTCC > NC_002947/5925879‑5926158 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |