New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5926012 =	41 (0.780)	4 (0.080)	4/246	NT	8.6%	coding (133/1083 nt)	gcvT‑II	aminomethyltransferase
	?	NC_002947	5926051 =	45 (0.880)					coding (94/1083 nt)	gcvT‑II	aminomethyltransferase

GGGTCGTCGAGGCGGGCCACGTCGTTGGCCAGCAGGCGCTGCAGCCAAACTGTGGCATCAGTGCCGTCGACATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTCCCATGGGTTTCTCCTTCCGGGCGTGGCGAAGCGGCGGCGGTCGATGACGTTGGGTCGT  >  NC_002947/5925906‑5926198                                                                                                                                                  |                                                                                                                                                    gggTCGTCGAGGCGGGCCACGTCGTTGGCCAGCAGGCGCTGCAGCCAAACTGTGGCATCAGTGCCGTCGACATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGcc                                                                                                                                                  <  6:126265/149‑1 (MQ=255)   gtcgtcGAGGCGGGCCACGTCGTTGGCCAGCAGGCGCTGCAGCCAAACTGTGGCATCAGTGCCGTCGACATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCa                                                                                                                                                 >  2:18901/1‑148 (MQ=255)    tcgtcgAGGCGGGCCACGTCGTTGGCCAGCAGGCGCTGCAGCCAAACTGTGGCATCAGTGCCGTCGACATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACTTGATGGTGCTCCTCGACCTGCGAGCCATa                                                                                                                                               <  1:203461/149‑1 (MQ=255)       tcgAGGCGGGCCACGTCGTTGGCCAGCAGGCGCTGCAGCCAAACTGTGGCATCAGTGCCGTCGACATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTg                                                                                                                                            >  3:164144/1‑149 (MQ=255)       tcgAGGCGGGCCACGTCGTTGGCCAGCAGGCGCTGCAGCCAAACTGTGGCATCAGTGCCGTCGACATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTg                                                                                                                                            <  3:177289/149‑1 (MQ=255)           ggCGGGCCACGTCGTTGGCCAGCAGGCGCTGCAGCCAAACTGTGGCATCAGTGCCGTCGACATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAgg                                                                                                                                        <  1:18901/149‑1 (MQ=255)            catgggacagcgcacgcttttgtatgacctgcacctggcgctaggcgccaagacggtcgatttcggtggctgggacatgcccctgcactatggctCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATa                                                                                                                                               >  7:327674‑M1/96‑141 (MQ=255)            catgggacagcgcacgcttttgtatgacctgcacctggcgctaggcgccaagacggtcgatttcggtggctgggacatgcccctgcactatggctCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATa                                                                                                                                               <  8:327674‑M1/46‑1 (MQ=255)               ggCCACGTCGTTGGCCAGCAGGCGCTGCAGCCAAACTGTGGCATCAGTGCCGTCGACATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAg                                                                                                                                         >  4:69567/1‑144 (MQ=255)               ggCCACGTCGTTGGCCAGCAGGCGCTGCAGCCAAACTGTGGCATCAGTGCCGTCGACATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAg                                                                                                                                         <  3:69567/144‑1 (MQ=255)                gCCACGTCGTTGGCCAGCAGGCGCTGCAGCCAAACTGTGGCATCAGTGCCGTCGACATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCAt                                                                                                                                   >  4:317205/1‑149 (MQ=255)                     gtcgtTGGCCAGCAGGCGCTGCAGCCAAACTGTGGCATCAGTGCCGTCGACATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAgg                                                                                                                                        >  1:194302/1‑139 (MQ=255)                     gtcgtTGGCCAGCAGGCGCTGCAGCCAAACTGTGGCATCAGTGCCGTCGACATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAgg                                                                                                                                        <  2:194302/139‑1 (MQ=255)                              tttgtatgacctgcacctggcgctaggcgccaagacggtcgatttcggtggctgggacatgcccctgcactatggctCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAg                                                                                                                                                    <  1:7133‑M1/41‑1 (MQ=255)                              tttgtatgacctgcacctggcgctaggcgccaagacggtcgatttcggtggctgggacatgcccctgcactatggctCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAg                                                                                                                                                    >  2:7133‑M1/78‑118 (MQ=255)                              cagcagGCGCTGCAGCCAAACTGTGGCATCAGTGCCGTCGACATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCg                                                                                                                      >  7:67548/1‑148 (MQ=255)                              cagcagGCGCTGCAGCCAAACTGTGGCATCAGTGCCGTCGACATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCg                                                                                                                      >  7:54917/1‑148 (MQ=255)                                    gcgcTGCAGCCAAACTGTGGCATCAGTGCCGTCGACATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGa                                                                                                               <  4:294347/149‑1 (MQ=255)                                           aGCCAAACTGTGGCATCAGTGCCGTCGACATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCtt                                                                                                        >  2:169413/1‑149 (MQ=255)                                             ccAAACTGTGGCATCAGTGCCGTCGACATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTgg                                                                                                      <  4:181985/149‑1 (MQ=255)                                                            aGTGCCGTCGACATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGGCTTGGCGCTAGGCGCCaaga                                                                                       <  5:274549/149‑4 (MQ=255)                                                                ccGTCGACATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAg                                                                                   <  3:317205/149‑1 (MQ=255)                                                                  gTCGACATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGt                                                                                 <  4:164144/149‑1 (MQ=255)                                                                  gTCGACATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGt                                                                                 <  8:67548/149‑1 (MQ=255)                                                                    cGACATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCtt                                                                                                        >  3:77657/1‑124 (MQ=255)                                                                    cGACATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCtt                                                                                                        <  4:77657/124‑1 (MQ=255)                                                                     gACATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCa                                                                               >  7:177473/1‑148 (MQ=255)                                                                       cATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATAc                                                                            <  8:177473/149‑1 (MQ=255)                                                                           gATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACaaa                                                                         <  8:54917/148‑1 (MQ=255)                                                                                   tCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAgc                                                                                              <  7:327956/119‑1 (MQ=255)                                                                                   tCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAgc                                                                                              >  8:327956/1‑119 (MQ=255)                                                                                        tGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATa                                                                             >  5:333197/1‑131 (MQ=255)                                                                                        tGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATa                                                                             <  6:333197/131‑1 (MQ=255)                                                                                        tGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTc                                                            <  1:169413/148‑1 (MQ=255)                                                                                                aTCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAg                                                                                         >  4:319262/1‑111 (MQ=255)                                                                                                    tatggctcgcaggtcgaggagcaccatcaggtgcgcagcgattgcgAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTCCCATg                                                       <  8:327674‑M2/95‑1 (MQ=255)                                                                                                    tatggctcgcaggtcgaggagcaccatcaggtgcgcagcgattgcgAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTCCCATg                                                       >  7:327674‑M2/47‑141 (MQ=255)                                                                                                         gccgcAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTCCCATGGGTTTCTCCTTcc                                          >  7:67602/1‑149 (MQ=255)                                                                                                         ctcgcaggtcgaggagcaccatcaggtgcgcagcgattgcgAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACaaa                                                                         <  1:7133‑M2/77‑1 (MQ=255)                                                                                                         ctcgcaggtcgaggagcaccatcaggtgcgcagcgattgcgAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACaaa                                                                         >  2:7133‑M2/42‑118 (MQ=255)                                                                                                          ccgcAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTcc                                                           >  1:239577/1‑131 (MQ=255)                                                                                                          ccgcAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTcc                                                           <  2:239577/131‑1 (MQ=255)                                                                                                           CGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTCCCATGGGTTTCTCCTTcc                                          <  1:89849‑M1/147‑1 (MQ=255)                                                                                                           CGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTCCCATGGGTTTCTCCTTcc                                          >  2:89849‑M1/1‑147 (MQ=255)                                                                                                                  gCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAAGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTCCCATGGGTTTCTCCTTCCGGGCGTGGc                                 <  5:67697/149‑1 (MQ=255)                                                                                                                       gcACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTCCCATGGGTTTCTCCTTCCGGGCGTGGCGAAgc                            >  2:37953/1‑149 (MQ=255)                                                                                                                             gATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCAt                                                                                                                                   <  7:7644/40‑1 (MQ=255)                                                                                                                             gATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCAt                                                                                                                                   >  8:7644/1‑40 (MQ=255)                                                                                                                                       ctcGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTCCCATGGGTTTCTCCTTCCGGGCGt                                    <  2:128417/125‑1 (MQ=255)                                                                                                                                       ctcGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTCCCATGGGTTTCTCCTTCCGGGCGt                                    >  1:128417/1‑125 (MQ=255)                                                                                                                                       ctcGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTCCCATGGGTTTCTCCTTCCGGGCGTGGCGAAgc                            >  2:13882/1‑133 (MQ=255)                                                                                                                                       ctcGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTCCCATGGGTTTCTCCTTCCGGGCGTGGCGAAgc                            <  1:13882/133‑1 (MQ=255)                                                                                                                                       ctcGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTCCCATGGGTTTCTCCTTCCGGGCGTGGCGAAGCGGCGGCGGTCGATGAc            >  6:298449/1‑149 (MQ=255)                                                                                                                                       ctcGACCTGCGAGCCATAGTGCAGGGCCATGTCCCAGCCACCGAAATCTACCGTCTTCGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTCCCATGGGTTTCTCCTTCCGGGCGTGGCGAAGCGGCGGCGGTCGATGAc            >  2:196363/1‑149 (MQ=255)                                                                                                                                        tcGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGTGCTGTCCCATGGGTTTCTCCTTCCGGGCGTGGCGAAGCGGCGGCGGTCGATGACg           >  6:84998/1‑149 (MQ=255)                                                                                                                                        tcGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTCCCATGGGTTTCTCCTTCCGGGCGt                                    >  6:105336/1‑124 (MQ=255)                                                                                                                                        tcGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTCCCATGGGTTTCTCCTTCCGGGCGt                                    <  5:105336/124‑1 (MQ=255)                                                                                                                                            ccTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGTGCTGTCCCATGGGTTTCTCCTTCCGGGCGTGGCGAAGCGGCGGCGGTCGATGACGTTgg       <  5:84998/149‑1 (MQ=255)                                                                                                                                               gcgAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCa                                                                               <  7:293230‑M2/71‑1 (MQ=255)                                                                                                                                               gcgAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCa                                                                               >  8:293230‑M2/4‑74 (MQ=255)                                                                                                                                                  aGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTACAGGTCATACAAAAGCGTGCGCTGTCCCATGGGTTTCTCCTTCCGGGCGTGGCGAAGCGGCGGCGGTCGATGACGTTGGgtcgt  >  8:170848/1‑148 (MQ=255)                                                                                                                                                  |                                                                                                                                                    GGGTCGTCGAGGCGGGCCACGTCGTTGGCCAGCAGGCGCTGCAGCCAAACTGTGGCATCAGTGCCGTCGACATCGATCACGGTCATATGAGAAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTCCCATGGGTTTCTCCTTCCGGGCGTGGCGAAGCGGCGGCGGTCGATGACGTTGGGTCGT  >  NC_002947/5925906‑5926198

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.