New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5940728 =	48 (0.910)	4 (0.080)	4/248	NT	7.2%	coding (567/1113 nt)	yhhJ	translation‑like protein
	?	NC_002947	5940769 =	57 (1.110)					coding (608/1113 nt)	yhhJ	translation‑like protein

GTGCCATGCTCACGCTCGCGCAGCAGCGCGGTGCCAGTGAGGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5940772‑5940728 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgGCACCCTCGACCACCTGCTGGTGCTGCCGCTGACCGCGCTGGAGATCATGCTGGCCAAGATCGGCAGCAACGCGCTGGTGGTGGTGATCTGCACCTGGATTTCGTTGGTGGTAGTCGTCAAAGGTGCACTGGGCGTGCCGCTGTCT  >  NC_002947/5940769‑5940914                                                                                                                                                                                                 GTGCCATGCTCACGCTCGCGCAGCAGCGCGGTGCCAGTGAGGATGGCACCCTCGACCACCTGCTGGTGCTGCCGCTGACCGCGCTGGAGATCATGCTGGCCAAGATCGGCAGCAACGCGCTGGTGGTGGTGATCTGCACCTGGATTTCG                                            >  6:326962/1‑149     CATGCTCACGCTCGCGCAGCAGCGCGGTGCCAGTGAGGATGGCACCCTCGACCACCTGCTGGTGCTGCCGCTGACCGCGCTGGAGATCATGCTGGCCAAGATCGGCAGCAACGCGCTGGTGGTG                                                                 >  7:226246/1‑124     CATGCTCACGCTCGCGCAGCAGCGCGGTGCCAGTGAGGATGGCACCCTCGACCACCTGCTGGTGCTGCCGCTGACCGCGCTGGAGATCATGCTGGCCAAGATCGGCAGCAACGCGCTGGTGGTG                                                                 <  8:226246/124‑1                    GCAGCAGCGCGGTGCCAGTGAGGATGGCACCCTCGACCACCTGCTGGTGCTGCCGCTGACCGCGCTGGAGATCATGCTGGCCAAGATCGGCAGCAACGCGCTGGTGGTGGTGATCTGCACCTGGATTTCGTTGGTGGTAGTCGTCAAAG                         <  5:326962/149‑1                                           ATGGCACCCTCGACCACCTGCTGGTGCTGCCGCTGACCGCGCTGGAGATCATGCTGGCCAAGATCGGCAGCAACGCGCTGGTGGTGGTGATCTGCACCTGGATTTCGTTGGTGGTAGTCGTCAAAGGTGCACTGGGCGTGCCGCTGTCT  <  2:326493/149‑1                                             GGCACCCTCGACCACCTGCTGGTGCTGCCGCTGACCGCGCTGGAGATCATGCTGGCCAAGATCGGCAGCAACGCGCTGGTGGTGGTGATCTGCACCTGG                                                  <  8:251253/99‑1                                                                                                                                                                                                 GTGCCATGCTCACGCTCGCGCAGCAGCGCGGTGCCAGTGAGGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5940772‑5940728 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgGCACCCTCGACCACCTGCTGGTGCTGCCGCTGACCGCGCTGGAGATCATGCTGGCCAAGATCGGCAGCAACGCGCTGGTGGTGGTGATCTGCACCTGGATTTCGTTGGTGGTAGTCGTCAAAGGTGCACTGGGCGTGCCGCTGTCT  >  NC_002947/5940769‑5940914

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.