| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6008533 = | 46 (0.870) | 4 (0.080) | 4/242 | NT | 8.4% | coding (819/1389 nt) | norM | multidrug resistance protein NorM |
| ? | NC_002947 | 6008577 = | 43 (0.850) | coding (863/1389 nt) | norM | multidrug resistance protein NorM | |||||
ATGGCCCCAAACCCGATGCCCACCCGCCCGGCGCTGCGCGCCGCCAGCAGGTTGCCAGCGCCGTAGTACAGGCCGACGCGCATGGTCACCGCATAGGACAAGCCAGTCGGCACCATGAATGCCGTGGACACGATCT‑GCAGGGCAATCTGGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6008685‑6008533‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggtgcCGACTGGCTTGTCCTATGCGGTGACCATGCGCGTCGGCCTGTACTACGGCGCTGGCAACCTGCTGGCGGCGCGCAGCGCCGGGCGGGTGGGCATCGGGTTTGGGGCCATGATCATGTTTGCCTTCGCCACGCTGTTCCTGCTGCTGC > NC_002947/6008577‑6008723 ATGGCCCCAAACCCGATGCCCACCCGCCCGGCGCTGCGCGCCGCCAGCAGGTTGCCAGCGCCGTAGTACAGGCCGACGCGCATGGTCACCGCATAGGACAAGCCAGTCGGCACCATGAATGCCGTGGACACGATCT‑GCAGGGCAATCTG > 5:199714/1‑149ATGGCCCCAAACCCGATGCCCACCCGCCCGGCGCTGCGCGCCGCCAGCAGGTTGCCAGCGCCGTAGTACAGGCCGACGCGCATGGTCACCGCATAGGACAAGCCAGTCGGCACCATGAATGCCGTGGACACGATCT‑GCAGGGCAATCTG > 6:326453/1‑149 GCCCCAAACCCGATGCCCACCCGCCCGGCGCTGCGCGCCGCCAGCAGGTTGCCAGCGCCGTAGTACAGGCCGACGCGCATGGTCACCGCATAGGACAAGCCAGTCGGCACCATGAATGCCATGGACACGATCT‑GCAGGGCAATCTGGTG < 5:289723/149‑1 GGCACCATGAATGCCGTGGACACGATCT‑GCAGGGCAATCTGGTGCCGACTGGCTTGTCCTATGCGGTGACCATGCGCGTCGGCCTGTACTACGGCGCTG > 1:49424/1‑99 GGCACCATGAATGCCGTGGACACGATCT‑GCAGGGCAATCTGGTGCCGACTGGCTTGTCCTATGCGGTGACCATGCGCGTCGGCCTGTACTACGGCGCTG < 2:49424/99‑1 CACCATGAATGCCGTGGACACGATCTGGCAGGGCAATCTGGTGCCGACTGGCTTGTCCTATGCGGTGACCATGCGCGTCGGCCTGTACTACGGCGCTGGCAACCTGCTGGCGGCGCGCAGCGCCGGGCGGGTGGGCATCGGGTTTGGGG > 1:3907/1‑149 AATGCCGTGGACACGATCT‑GCAGGGCAATCTGGTGCCGACTGGCTTGTCCTATGCGGTGACCATGCGCGTCGGCCTGTACTACGGCGCTGGCAACCTGCTGGCGGCGCGCAGCGCCGGGCGGGTGGGCATCGGGTTTGGGGCCATGATC < 2:3907/149‑1 TGGTGCCGACTGGCTTGTCCTATGCGGTGACCATGCGCGTCGGCCTGTACTACGGCGCTGGCAACCTGCTGGCGGCGCGCAGCGCCGGGCGGGTGGGCATCGGGTTTGGGGCCATGATCATGTTTGCCTTCGCCACGCTGTTCCTGCTG < 4:161927/149‑1 GTGCCGACTGGCTTGTCCTATGCGGTGACCATGCGCGTCGGCCTGTACTACGGCGCTGGCAACCTGCTGGCGGCGCGCAGCGCCGGGCGGGTGGGCATCGGGTTTGGGGCCATGATCATGTTTGCCTTCGCCACGCTGTT < 7:42546/140‑1 GTGCCGACTGGCTTGTCCTATGCGGTGACCATGCGCGTCGGCCTGTACTACGGCGCTGGCAACCTGCTGGCGGCGCGCAGCGCCGGGCGGGTGGGCATCGGGTTTGGGGCCATGATCATGTTTGCCTTCGCCACGCTGTT > 8:42546/1‑140 GCCGACTGGCTTCTCCTATGCGGTGACCATGCGCGTCGGCCTGTACTACGGCGCTGGCAACCTGCTGGCGGCGCGCAGCGCCGGGCGGGTGGGCATCGGGTATGGGGCAATGATCAAGTTTGCCTTCGCAACGCTGTTCCTGCTGATGa > 8:232167/1‑148 ATGGCCCCAAACCCGATGCCCACCCGCCCGGCGCTGCGCGCCGCCAGCAGGTTGCCAGCGCCGTAGTACAGGCCGACGCGCATGGTCACCGCATAGGACAAGCCAGTCGGCACCATGAATGCCGTGGACACGATCT‑GCAGGGCAATCTGGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6008685‑6008533‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggtgcCGACTGGCTTGTCCTATGCGGTGACCATGCGCGTCGGCCTGTACTACGGCGCTGGCAACCTGCTGGCGGCGCGCAGCGCCGGGCGGGTGGGCATCGGGTTTGGGGCCATGATCATGTTTGCCTTCGCCACGCTGTTCCTGCTGCTGC > NC_002947/6008577‑6008723 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |