New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	6008533 =	46 (0.870)	4 (0.080)	4/242	NT	8.4%	coding (819/1389 nt)	norM	multidrug resistance protein NorM
	?	NC_002947	6008577 =	43 (0.850)					coding (863/1389 nt)	norM	multidrug resistance protein NorM

CAAGGGCCTGTCACGCCCATCACTGGCGGCCCTGCGCGAGCTGTGGCGGCTGGGCCTGCCGATTGGCGGTACCTACATGGTGGAAGTGGGCCTGTTCGCCTTCGCCGCGCTGTGCATGGGCGTGCTGGGCAGCACCGAACTGGCGGCGCACCAGATTGCCCTGC‑AGATCGTGTCCACGGCATTCATGGTGCCGACTGGCTTGTCCTATGCGGTGACCATGCGCGTCGGCCTGTACTACGGCGCTGGCAACCTGCTGGCGGCGCGCAGCGCCGGGCGGGTGGGCATCGGGTTTGGG  >  NC_002947/6008386‑6008680                                                                                                                                                    |                                                                                                                                                     tcatcagcaggaacagcgttgcgaaggcaaacttgatcattgccccatacccgatgcccacccgcccggcgctgcgcgccgccagcaggttgccagcgccgtagtacaggccgacgcgcatggtcaccgcataggagaagccagtcgGc                                                                                                                                                     >  8:232167‑M1/148‑149 (MQ=255)     cagcaggaacagcgtggcgaaggcaaacatgatcatggccccaaacccgatgcccacccgcccggcgctgcgcgccgccagcaggttgccagcgccgtagtacaggccgacgcgcatggtcaccgcataggacaagccagtcgGCACCa                                                                                                                                                 <  4:161927‑M1/6‑1 (MQ=255)            aacagcgtggcgaaggcaaacatgatcatggccccaaacccgatgcccacccgcccggcgctgcgcgccgccagcaggttgccagcgccgtagtacaggccgacgcgcatggtcaccgcataggacaagccagtcgGCAc                                                                                                                                                   <  7:42546‑M1/4‑1 (MQ=255)            aacagcgtggcgaaggcaaacatgatcatggccccaaacccgatgcccacccgcccggcgctgcgcgccgccagcaggttgccagcgccgtagtacaggccgacgcgcatggtcaccgcataggacaagccagtcgGCAc                                                                                                                                                   >  8:42546‑M1/137‑140 (MQ=255)             aCGCCCATCACTGGCGGCCCTGCGCGAGCTGTGGCGGCTGGGCCTGCCGATTGGCGGTACCTACATGGTGGAAGTGGGCCTGTTCGCCTTCGCCGCGCTGTGCATGGGCGTGCTGGGCAGCACCGAACTGGCGGCGCACCAGATTGccc                                                                                                                                         <  2:113996/149‑1 (MQ=255)             aCGCCCATCACTGGCGGCCCTGCGCGAGCTGTGGCGGCTGGGCCTGCCGATTGGCGGTACCTACATGGTGGAAGTGGGCCTGTTCGCCTTCGCCGCGCTGTGCATGGGCGTGCTGGGCAGCACCGAACTGGCGGCGCACCAGATTGcc                                                                                                                                          <  5:8727/148‑1 (MQ=255)              gggccATCCCTGGCGGGCCTGCGCGTTGTGGGGGGGGTGGGGCTGGCGTTTGGCGGGTCCTTCATTGGGGTACGGGGCCTGTTCGCCGTCGGCGGGCTGTGGAAGGGCGTGCTGGGCAGCACCGAACTGGCGGCGCACCAGATTGCCCt                                                                                                                                        <  6:15200/146‑1 (MQ=255)               gCCCATCACTGGCGGCCCTGCGCGAGCTGTGGCGGCTGGGCCTGCCGATTGGCGGTACCTACATGGTGGAAGTGGGCCTGTTCGCCTTCGCCGCGCTGTGCATGGCCGTGAGGGGCGGCCCCGAACTGGCGGCGCCCCAGATTGcccgg                                                                                                                                       >  5:15200/1‑147 (MQ=255)                 ccATCACTGGCGGCCCTGCGCGAGCTGTGGCGGCTGGGCCTGCCGATTGGCGGTACCTACATGGTGGAAGTGGGCCTGTTCGCCTTCGCCGCGCTGTGCATGGGCGTGCTGGGCAGCACCGAACTGGCGGCGCACCAGATTGCCCTg                                                                                                                                       >  2:150029/1‑147 (MQ=255)                      aCTGGCGGCCCTGCGCGAGCTGTGGCGGCTGGGCCTGCCGATTGGCGGTACCTACATGGTGGAAGTGGGCCTGTTCGCCTTCGCCGCGCTGTGCATGGGCGTGCTGGGCAGCACCGAACTGGCGGCGCACCAGATTGCCCTGC‑AGATCg                                                                                                                               >  2:61483/1‑149 (MQ=255)                       cTGGCGGCCCTGCGCGAGCTGTGGCGGCTGGGCCTGCCGATTGGCGGTACCTACATGGTGGAAGTGGGCCTGTTCGCCTTCGCCGCGCTGTGCATGGGCGTGCTGGGCAGCACCGAACTGGCGGCGCACCAGATTGCCCTGC‑AGATCgt                                                                                                                              >  4:190471/1‑149 (MQ=255)                            ggcCCTGCGCGAGCTGTGGCGGCTGGGCCTGCCGATTGGCGGTACCTACATGGTGGAAGTGGGCCTGTTCGCCTTCGCCGCGCTGTGCATGGGCGTGCTGGGCAGCACCGAACTGGCGGCGCACCAGATTGCCCTGC‑AGATCGTGTCCa                                                                                                                         >  7:199937/1‑149 (MQ=255)                               ccTGCGCGAGCTGTGGCGGCTGGGCCTGCCGATTGGCGGTACCTACATGGTGGAAGTGGGCCTGTTCGCCTTCGCCGCGCTGTGCATGGGCGTGCTGGGCAGCACCGAACTGGCGGCGCACCAGATTGCCCTGC‑AGATCGTGTCCACgg                                                                                                                      >  5:100031/1‑149 (MQ=255)                               ccTGCGCGAGCTGTGGCGGCTGGGCCTGCCGATTGGCGGTACCTACATGGTGGAAGTGGGCCTGTTCGCCTTCGCCGCGCTGTGCATGGGCGTGCTGGGCAGCACCGAACTGGCGGCGCACCAGATTGCCCTGC‑AGATCGTGTCCACgg                                                                                                                      >  7:255995/1‑149 (MQ=255)                               ccTGCGCGAGCTGTGGCGGCTGGGCCTGCCGATTGGCGGTACCTACATGGTGGAAGTGGGCCTGTTCGCCTTCGCCGCGCTGTGCATGGGCGTGCTGGGCAGCACCGAACTGGCGGCGCACCAGATTGCCCTGC‑AGATCGTGTCCACgg                                                                                                                      >  4:14566/1‑149 (MQ=255)                                 tGCGCGAGCTGTGGCGGCTGGGCCTGCCGATTGGCGGTACCTACATGGTGGAAGTGGGCCTGTTCGCCTTCGCCGCGCTGTGCATGGGCGTGCTGGGCAGCACCGAACTGGCGGCGCACCAGATTGCCCTGC‑AGATCGTGTCCACGGCa                                                                                                                    >  8:57027/1‑149 (MQ=255)                                  gcgcGAGCTGTGGCGGCTGGGCCTGCCGATTGGCGGTACCTACATGGTGGAAGTGGGCCTGTTCGCCTTCGCCGCGCTGTGCATGGGCGTGCTGGGCAGCACCGAACTGGCGGCGCACCAGATTGCCCTGC‑AGATCGTGTCCACGGCAt                                                                                                                   >  3:36581/1‑149 (MQ=255)                                   gatcatggccccaaacccgatgcccacccgcccggcgctgcgcgccgccagcaggttgccagcgccgtagtacaggccgacgcgcatggtcaccgcataggacaagccagtcgGCACCAGATTGCCCTGC‑AGATCGTGTCCACGGCAtt                                                                                                                  <  2:3907‑M1/36‑1 (MQ=255)                                      gAGCTGTGGCGGCTGGGCCTGCCGATTGGCGGTACCTACATGGTGGAAGTGGGCCTGTTCGCCTTCGCCGCGCTGTGCATGGGCGTGCTGGGCAGCACCGAACTGGCGGCGCACCAGATTGCCCTGC‑AGATCGTGTCCACGGCATTCAt                                                                                                               <  8:199937/149‑1 (MQ=255)                                       aGCTGTGGCGGCTGGGCCTGCCGATTGGCGGTACCTACATGGTGGAAGTGGGCCTGTTCGCCTTCGCCGCGCTGTGCATGGGCGTGCTGGGCAGCACCGAACTGGCGGCGCACCAGATTGCCCTGC‑AGATCGTGTCCACGGCATTCATg                                                                                                              <  3:190471/149‑1 (MQ=255)                                           ccccaaacccgatgcccacccgcccggcgctgcgcgccgccagcaggttgccagcgccgtagtacaggccgacgcgcatggtcaccgcataggacaagccagtcgGCACCAGATTGCCCTGCCAGATCGTGTCCACGGCATTCATGGTg                                                                                                           >  1:3907‑M1/106‑149 (MQ=255)                                                ggcTGGGCCTGCCGATTGGCGGTACCTACATGGTGGAAGTGGGCCTGTTCGCCTTCGCCGCGCTGTGCATGGGCGTGCTGGGCAGCACCGAACTGGCGGCGCACCAGATTGCCCTGC‑AGATCGTGTc                                                                                                                           >  1:186698/1‑127 (MQ=255)                                                ggcTGGGCCTGCCGATTGGCGGTACCTACATGGTGGAAGTGGGCCTGTTCGCCTTCGCCGCGCTGTGCATGGGCGTGCTGGGCAGCACCGAACTGGCGGCGCACCAGATTGCCCTGC‑AGATCGTGTc                                                                                                                           <  2:186698/127‑1 (MQ=255)                                                     ggCCTGCCGATTGGCGGTACCTACATGGTGGAAGTGGGCCTGTTCGCCTTCGCCGCGCTGTGCATGGGCGTGCTGGGCAGCACCGAACTGGCGGCGCACCAGATTGCCCTGC‑AGATCGTGTCCACGGCATTCATGGTGCCGACTGGc                                                                                                  <  1:61483/147‑1 (MQ=255)                                                     ggCCTGCCGATTGGCGGTACCTACATGGTGGAAGTGGGCCTGTTCGCCTTCGCCGCGCTGTGCATGGGCGTGCTGGGCAGCACCGAACTGGCGGCGCACCAGATTGCCCTGC‑AGATCGTGTCCACGGCATTCATGGTGCCGACTGGCtt                                                                                                <  4:36581/149‑1 (MQ=255)                                                            cGATTGGCGGTACCTACATGGTGGAAGTGGGCCTGTTCGCCTTCGCCGCGCTGTGCATGGGCGTGCTGGGCAGCACCGAACTGGCGGCGCACCAGATTGCCCTGC‑AGATCGTGTCCACGGCATTCATGGTGCCGACTGGCTTGTCCTAt                                                                                         <  7:57027/149‑1 (MQ=255)                                                               ttGGCGGTACCTACATGGTGGAAGTGGGCCTGTTCGCCTTCGCCGCGCTGTGCATGGGCGTGCTGGGCAGCACCGAACTGGCGGCGCACCAGATTGCCCTGC‑AGATCgt                                                                                                                              >  2:31142/1‑109 (MQ=255)                                                                  gCGGTACCTACATGGTGGAAGTGGGCCTGTTCGCCTTCGCCGCGCTGTGCATGGGCGTGCTGGGCAGCACCGAACTGGCGGCGCACCAGATTGCCCTGC‑AGATCGTGTCCACGGCATTCATGGTGCCGACTGGCTTGTCCTATGCGGt                                                                                    <  6:89493/148‑1 (MQ=255)                                                                     gTACCTACATGGTGGAAGTGGGCCTGTTCGCCTTCGCCGCGCTGTGCATGGGCGTGCTGGGCAGCACCGAACTGGCGGCGCACCAGATTGCCCTGC‑AGATCGTGTCCACGGCATTCATGGTGCCGACTGGCTTGTCCTATGCGGTGAcc                                                                                <  8:255995/149‑1 (MQ=255)                                                                     gTACCTACATGGTGGAAGTGGGCCTGTTCGCCTTCGCCGCGCTGTGCATGGGCGTGCTGGGCAGCACCGAACTGGCGGCGCACCAGATTGCCCTGC‑AGATCGTGTCCACGGCATTCATGGTGCCGACTGGCTTGTCCTATGCGGTGAcc                                                                                <  6:100031/149‑1 (MQ=255)                                                                            cATGGTGGAAGTGGGCCTGTTCGCCTTCGCCGCGCTGTGCATGGGCGTGCTGGGCAGCACCGAACTGGCGGCGCACCAGATTGCCCTGC‑AGATCGTGTCCACGGCATTCATGGTGCCGACTGGCTTGTCCTATGCGGTGACCATgcgc                                                                          <  1:150029/148‑1 (MQ=255)                                                                            cATGGTGGAAGTGGGCCTGTTCGCCTTCGCCGCGCTGTGCATGGGCGTGCTGGGCAGCACCGAACTGGCGGCGCACCAGATTGCCCTGC‑AGATCGTGTCCACGGCATTCATGGTGCCGACTGGCTTGTCCTATGCGGTGACCATgc                                                                            <  6:155965/146‑1 (MQ=255)                                                                            cATGGTGGAAGTGGGCCTGTTCGCCTTCGCCGCGCTGTGCATGGGCGTGCTGGGCAGCACCGAACTGGCGGCGCACCAGATTGCCCTGC‑AGATCGTGTCCACGGCATTCATGGTGCCGACTGGCTTGTCCTATGCGGTGACCATgc                                                                            >  5:155965/1‑146 (MQ=255)                                                                                 tggAAGTGGGCCTGTTCGCCTTCGCCGCGCTGTGCATGGGCGTGCTGGGCAGCACCGAACTGGCGGCGCACCAGATTGCCCTGC‑AGATCGTGTCCACGGCATTCATGGTGCCGACTGGCTTGTCCTATGCGGTGACCATGCGCGTCGGc                                                                    >  5:326453/1‑149 (MQ=255)                                                                                      gTGGGCCTGTTCGCCTTCGCCGCGCTGTGCATGGGCGTGCTGGGCAGCACCGAACTGGCGGCGCACCAGATTGCCCTGC‑AGATCGTGTCCACGGCATTCATGGTGCCGACTGGCTTGTCCTATGCGGTGACCATGCGCGTCGGCCTGta                                                               <  3:14566/149‑1 (MQ=255)                                                                                       tGGGCCTGTTCGCCTTCGCCGCGCTGTGCATGGGCGTGCTGGGCAGCACCGAACTGGCGGCGCACCAGATTGCCCTGC‑AGATCGTGTCCACGGCATTCATGGTGCCGACTGGCTTGTCCTATGCGGTGACCATGCGCGTCGGCCTGtac                                                              >  6:53732/1‑149 (MQ=255)                                                                                            cTGTTCGCCTTCGCCGCGCTGTGCATGGGCGTGCTGGGCAGCACCGAACTGGCGGCGCACCAGATTGCCCTGC‑AGATCGTGTCCACGGCATTCATGGTGCCGACTGGCTTGTCCTATGCGGt                                                                                    <  6:259514/122‑1 (MQ=255)                                                                                            cTGTTCGCCTTCGCCGCGCTGTGCATGGGCGTGCTGGGCAGCACCGAACTGGCGGCGCACCAGATTGCCCTGC‑AGATCGTGTCCACGGCATTCATGGTGCCGACTGGCTTGTCCTATGCGGTGACCATGCGCGTCGGCCTGTACTACgg                                                         >  6:133161/1‑149 (MQ=255)                                                                                              cagcgccgtagtacaggccgacgcgcatggtcaccgcataggacaagccagtcgGCACCAGATTGCCCTGC‑AGATCGTGTCCACGGCATTCATGGTGcc                                                                                                         >  1:49424‑M1/55‑99 (MQ=255)                                                                                              cagcgccgtagtacaggccgacgcgcatggtcaccgcataggacaagccagtcgGCACCAGATTGCCCTGC‑AGATCGTGTCCACGGCATTCATGGTGcc                                                                                                         <  2:49424‑M1/45‑1 (MQ=255)                                                                                               ttcgccttcgccGCGCTGTGCATGGGCGTGCTGGGCAGCACCGAACTGGCGGCGCACCAGATTGCCCTGC‑AGATCGTGTCCACGGCATTCATGGTGCCGACTGGCTTGTCCTATGCGGTGACCATGCGCGTCg                                                                      >  8:110446/1‑133 (MQ=255)                                                                                                    cttcgccGCGCTGTGCATGGGCGTGCTGGGCAGCACCGAACTGGCGGCGCACCAGAATGCCCTGC‑AGATCGTGTCCACGGCATTCATGGTGCCGACTGGCTTGTCCTATGCGGTGACCATGCGCGTCGGCCTGTACTACGGCGCTGGc                                                  >  1:97353/1‑148 (MQ=255)                                                                                                          cgcgCTGTGCATGGGCGTGCTGGGCAGCACCGAACTGGCGGCGCACCAGATTGCCCTGC‑AGATCGTGTCCACGGCATTCATGGTGCCGACTGGCTTGTCCTATGCGGTGACCAt                                                                              <  5:348220/114‑1 (MQ=255)                                                                                                          cgcgCTGTGCATGGGCGTGCTGGGCAGCACCGAACTGGCGGCGCACCAGATTGCCCTGC‑AGATCGTGTCCACGGCATTCATGGTGCCGACTGGCTTGTCCTATGCGGTGACCAt                                                                              >  6:348220/1‑114 (MQ=255)                                                                                                          cgcgCTGTGCATGGGCGTGCTGGGCAGCACCGAACTGGCGGCGCACCAGATTGCCCTGC‑AGATCGTGTCCACGGCATTCATGGTGCCGACTGGCTTGTCCTATGCGGTGACCATGCGCGTCGGCCTGTACTACGGCGCTGGCAACctgc                                           >  7:207440/1‑149 (MQ=255)                                                                                                                              tGGGCAGCACCGAACTGGCGGCGCACCAGATTGCCCTGC‑AGATCGTGTCCACGGCATTCATGGTGCCGACTGGc                                                                                                  >  1:169525/1‑74 (MQ=255)                                                                                                                              tGGGCAGCACCGAACTGGCGGCGCACCAGATTGCCCTGC‑AGATCGTGTCCACGGCATTCATGGTGCCGACTGGc                                                                                                  <  2:169525/74‑1 (MQ=255)                                                                                                                                gggagcagcGAACTGGCGGCGCACCAGATTGCCCTGC‑AGATCGTGTCCACGGCATTCATGGTGCCGACTTGCTTGTCCTATGCGGTGACCATGCGCGTCGGCCTGTACTACGGCGCTGGCAACCTGCTGGCGGCGCGCAGCGCcgggcg                     <  5:34407/146‑1 (MQ=255)                                                                                                                                      aCCGAACTGGCGGCGCACCAGATTGCCCTGC‑AGATCGTGTCCACGGCATTCATGGTGCCGACTGGCTTGTCCTATGCGGTGACCATGCGCGTCGGCCTGTACTACGGCGCTGGCAACCTGCTGGCGGCGCGCAGCGCCGGGCGGGTggg               >  6:199714/1‑149 (MQ=255)                                                                                                                                        cGAACTGTCGGCGCACCAGATTGCCCTGC‑AGATCGTGTCCACGGCATTCATGGTGCCGACTGGCTTGTCCTATGCGGTGACCATGCGCGTCGGCCTGTACTACGGCGCTGGCAACCTGCTGGCGGCGCGCAGCGCCGGGCGGGTGGGc              >  6:360980/1‑148 (MQ=255)                                                                                                                                        cGAACTGGCGGCGCACCAGATTGCCCTGC‑AGATCGTGTCCACGGCATTCATGGTGCCGACTGGCTTGTCCTATGCGGTGACCATGCGCGTCGGCCTGTACTACGGCGCTGGCAACCTGCTGGCGGCGCGCAGCGCCGGGCGGGTGGGCa             >  3:161927/1‑149 (MQ=255)                                                                                                                                          aaCTGGCGGCGCACCAGATTGCCCTGC‑AGATCGTGTCCACGGCATTCATGGTGCCGACTGGCTTGTCCTATGCGGTGACCATGCGCGTCGGCCTGTACTACGGCGCTGGCAACCTGCTGGCGGCGCGCAGCGCCGGGCGGGTGGGCATc           >  7:6001/1‑149 (MQ=255)                                                                                                                                            cTGGCGGCGCACCAGATTGCCCTGC‑AGATCGTGTCCACGGCATTCATGGTGCCGACTGGCTTGTCCTATGCGGTGACCATGCGCGTCGGCCTGTACTACGGCGCTGGCAACCTGCTGGCGGCGCGCAGCGCCGGGCGGGTGGGCATCgg         <  8:6001/149‑1 (MQ=255)                                                                                                                                             tGGCGGCGCACCAGATTGCCCTGC‑AGATCGTGTCCACGGCATTCATGGTGCCGACTGGCTTGTCCTATGCGGTGACCATGCGCGTCGGCCTGTACTACGGCGCTGGCAACCTGCTGGCGGCGCGCAGCGCCGGGCGGGTGGGCATCggg        >  6:17892/1‑149 (MQ=255)                                                                                                                                                   cgcACCAGATTGCCCTGC‑AGATCGTGTCCACGGCATTCATGGTGCCGACTGGCTTGTCCTATGCGGTGACCATGCGCGTCGGCCTGTACTACGGCGCTGGCAACCTGCTGGCGGCGCGCAGCGCCGGGCGGGTGGGCATCGGGTTTggg  <  5:133161/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                     CAAGGGCCTGTCACGCCCATCACTGGCGGCCCTGCGCGAGCTGTGGCGGCTGGGCCTGCCGATTGGCGGTACCTACATGGTGGAAGTGGGCCTGTTCGCCTTCGCCGCGCTGTGCATGGGCGTGCTGGGCAGCACCGAACTGGCGGCGCACCAGATTGCCCTGC‑AGATCGTGTCCACGGCATTCATGGTGCCGACTGGCTTGTCCTATGCGGTGACCATGCGCGTCGGCCTGTACTACGGCGCTGGCAACCTGCTGGCGGCGCGCAGCGCCGGGCGGGTGGGCATCGGGTTTGGG  >  NC_002947/6008386‑6008680

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.