| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6045929 = | 44 (0.830) | 3 (0.060) | 3/244 | NT | 6.1% | coding (182/768 nt) | PP_5298 | glutamine amidotransferase |
| ? | NC_002947 | 6045977 = | 50 (0.990) | coding (134/768 nt) | PP_5298 | glutamine amidotransferase | |||||
AGCGCCTGCCGTCAGCAGGTAGGGAAGAACTCCTCGCACACGGTCGGCGACAAGTATGTCGAGGCGGCCGGCTTTGCCGGCTTGCCACTGATCTTGCCGGCCCGTGATGGCGGCAGCGACACGCAAGCGCTGCTGGCTCGCCTGCACGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6046077‑6045929‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacggGCCGGCAAGATCAGTGGCAAGCCGGCAAAGCCGGCCGCCTCGACATACTTGTCGCCGACCGTGTGCGAGGA > NC_002947/6045977‑6046047 AGCGCCTGCCGTCAGCAGGTAGGGAAGAACTCCTCGCACACGGTCGGCGACAAGTATGTCGAGGCGGCCGGCTTTGCCGGCTTGCCACTGATCTTGCCGGCCCGTGATGGCGGCAGCGACACGCAAGCGCTGCTGGCTCGCCTGCACGG > 6:280071/1‑149AGCGCCTGCCGTCAGCAGGTAGGGAAGAACTCCTCGCACACGGTCGGCGACAAGTATGTCGAGGCGGCCGGCTTTGCCGGCTTGCCACTGATCTTGCCGGCCCGTGATGGCGGCAGCGACACGCAAGCGCTGCTGGCTCGCCTGCACG < 2:280539/148‑1 TTGCCGGCCCGTGATGGCGGCAGCGACACGCAAGCGCTGCTGGCTCGCCTGCACGGGCCGGCAAGATCAGTGGCAAGCCGGCAAAGCCGGCCGCCTCGACATACTTGTCGCCGACCGTGTGCGAGGA > 3:82844/1‑127 TTGCCGGCCCGTGATGGCGGCAGCGACACGCAAGCGCTGCTGGCTCGCCTGCACGGGCCGGCAAGATCAGTGGCAAGCCGGCAAAGCCGGCCGCCTCGACATACTTGTCGCCGACCGTGTGCGAGGA < 4:82844/127‑1 CGGCCCGTGATGGCGGCAGCGACACGCAAGCGCTGCTGGCTCGCCTGCACGGGCCGGCAAGATCAGTGGCAAGCCGGCAAAGC < 2:312240/83‑1 AGCGCCTGCCGTCAGCAGGTAGGGAAGAACTCCTCGCACACGGTCGGCGACAAGTATGTCGAGGCGGCCGGCTTTGCCGGCTTGCCACTGATCTTGCCGGCCCGTGATGGCGGCAGCGACACGCAAGCGCTGCTGGCTCGCCTGCACGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6046077‑6045929‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacggGCCGGCAAGATCAGTGGCAAGCCGGCAAAGCCGGCCGCCTCGACATACTTGTCGCCGACCGTGTGCGAGGA > NC_002947/6045977‑6046047 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |