New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 6055409 = | 48 (0.910) | 4 (0.080) | 4/238 | NT | 9.1% | coding (362/732 nt) | tonB | TonB energy transducing system subunit TonB |
? | NC_002947 | 6055475 = | 35 (0.710) | coding (428/732 nt) | tonB | TonB energy transducing system subunit TonB |
CGCGACGGCGCGCGTCTTCCGGGTAACGCTTGTACTTGGCAAGGTGGCGCAGCAGGTCGCTCTGCCAGGTTGGCAAGGCGTTGCTGTTGGACGCAATGCTCGGTGCCGGTGCCGCGGACTTCTGCGGTGGCGAGTTGCTGGGCGGTGCGTCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6055561‑6055409 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcgtccaACAGCAACGCCTTGCCAACCTGGCAGAGCGACCTGCTGCGCCACCTTGCCAAGTACAAGCGTTACCCGGAAGACGCGCGCCGTCGCGGCCTGCAAGGCATGAACCGCCTACGCTTCGTGGTCGACGCCGAAGGCAAGGTCGTGTCGTA > NC_002947/6055475‑6055622 CGCGACGGCGCGCGTCTTCCGGGTAACGCTTGTACTTGGCAAGGCGGCGCAGCAGGTCGCTCTGCCAGGTTGGCAAGGCGTTGCTGTTGGACGCAATGCTCGGTGCCGGTGCCGCGGACTTCTGCGGTGGCGAGTTGCTGGGCGGTGC < 5:187519/148‑1 CGCGACGGCGCGCGTCTTCCGGGTAACGCTTGTACTTGGCAAGGCGGCGCAGCAGGTCGCTCTGCCAGGTTGGCAAGGCGTTGCTGTTGGACGCAATGCTCGGTGCCGGTGCCGCGGACTTCTGCGGTGGCGAGTTGCTGGGCGGTGC > 6:187519/1‑148 GCGACGGCGCGCGTCTTCCGGGTAACGCTTGTACTTGGCAAGGTGGCGCAGCAGGTCGCTCTGCCAGGTTGGCAAGGCGTTGCTGTTGGACGCAATGCTCGGTGCCGGTGCCGCGGACTTCTGCGGTGGCGAGTTGCTGGGCGGTGCGT > 4:123810/1‑149 TGTTGGACGCAATGCTCGGTGCCGGTGCCGCGGACTTCTGCGGTGGCGAGTTGCTGGGCGGTGCGTCCAACAGCAACGCCTTGCCAACCTGGCAGAGCGACCTGCTGCGCCACCTTGCCAAGTACAAGCGTTACCCGGAAGACGCGCGC > 3:96092/1‑149 GACGCAATGCTCGGTGCCGGTGCCGCGGACTTCTGCGGTGGCGAGTTGCTGGGCGGTGCGTCCAACAGCAACGCCTTGCCAACCTGGCAGAGCGACCTGCTGCGCCAC > 7:297191/1‑108 GACGCAATGCTCGGTGCCGGTGCCGCGGACTTCTGCGGTGGCGAGTTGCTGGGCGGTGCGTCCAACAGCAACGCCTTGCCAACCTGGCAGAGCGACCTGCTGCGCCAC < 8:297191/108‑1 CAATGCTCGGTGCCGGTGCCGCGGACTTCTGCGGTGGCGAGTTGCTGGGCGGTGCGTCCAACAGCAACGCCTTGCCAACCTGGCAGAGCGACCTGCTGCGCCACCTTGCCAAGTACAAGCGTTACCCGGAAGACGCGCGCCGTCGCGGC < 4:96092/149‑1 CGTCCAACAGCAACGCCTTGCCAACCTGGCAGAGCGACCTGCTGCGCCACCTTGCCAAGTACAAGCGTTACCCGGAAGACGCGCGCCGTCGCGGCCTGCAAGGCATGAACCGCCTACGCTTCGTGGTCGACGCCGAAGGCAAGGTCGT < 5:310684/148‑1 AACAGCAACGCCTTGCCAACCTGGCAGAGCGACCTGCTGCGCCACCTTGCCAAGTACAAGCGTTACCCGGAAGACGCGCGCCGTCGCGGCCTGCAAGGCATGAACCGCCTACGCTTCGTGGTCGACGCCGAAGGCAAGGTCGTGTCGTA > 6:288369/1‑149 AACAGCAACGCCTTGCCAACCTGGCAGAGCGACCTGCTGCGCCACCTTGCCAAGTACAAGCGTTACCCGGAAGACGCGCGCCGTCGCGGCCTGCAAGGCATGAACCGCCTACGCTTCGTGGTCGACGCCGAAGGCAAGGTCGTGTCGT > 3:265580/1‑148 CGCGACGGCGCGCGTCTTCCGGGTAACGCTTGTACTTGGCAAGGTGGCGCAGCAGGTCGCTCTGCCAGGTTGGCAAGGCGTTGCTGTTGGACGCAATGCTCGGTGCCGGTGCCGCGGACTTCTGCGGTGGCGAGTTGCTGGGCGGTGCGTCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6055561‑6055409 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcgtccaACAGCAACGCCTTGCCAACCTGGCAGAGCGACCTGCTGCGCCACCTTGCCAAGTACAAGCGTTACCCGGAAGACGCGCGCCGTCGCGGCCTGCAAGGCATGAACCGCCTACGCTTCGTGGTCGACGCCGAAGGCAAGGTCGTGTCGTA > NC_002947/6055475‑6055622 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |