New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	6055409 =	48 (0.910)	4 (0.080)	4/238	NT	9.1%	coding (362/732 nt)	tonB	TonB energy transducing system subunit TonB
	?	NC_002947	6055475 =	35 (0.710)					coding (428/732 nt)	tonB	TonB energy transducing system subunit TonB

GCCGAAGGCCAAGCCCCAGCCGCCCAAGCCCGAGAAAAAGCCTGAGCCGCCGAAGGAAGCACCGCCCACCGAGCAAACGGTGGACGCACCGCCCAGCAACTCGCCACCGCAGAAGTCCGCGGCACCGGCACCGAGCATTGCGTCCAACAGCAACGCCTTGCCAACCTGGCAGAGCGACCTGCTGCGCCACCTTGCCAAGTACAAGCGTTACCCGGAAGACGCGCGCCGTCGCGGCCTGCAAGGCATGAACCGCCTACGCTTCGTGGTCGACGCCGAAGGCAAGGTCGTGTCGTA  >  NC_002947/6055329‑6055622                                                                                                                                                   |                                                                                                                                                    gcgcgcgtcttccgggtaacgcttgtacttggcaaggtggcgcagcaggtcgctctgccaggttggcaaggcgttgctgtTGGACGCACCGCCCAGCAACTCGCCACCGCAGAAGTCCGCGGCACCGGCACCGAGCATTGCGTCCAACa                                                                                                                                                   >  3:96092‑M1/81‑149 (MQ=255)    gAAGGCCAAGCCCCAGCCGCCCAAGCCCGAGAAAAAGCCTGAGCCGCCGAAGGAAGCACCGCCCACCGAGCAAACGGTGGACGCACCGCCCAGCAACTCGCCACCGCAGAAGTCCGCGGCACCGGCACCGAGCATTGCGTCCAACAGc                                                                                                                                                 >  3:215406/1‑148 (MQ=255)          cAAGCCCCAGCCGCCAAAGCCCGAGAAAAAGCCTGAGCCGCATAAGGAAGAACCGCCAAACGAGAAAACGGTGGACGCACCGACCAGCAACTAGCCACCGCATAAGTCCGCGTCACCGGCAACGAGCATTGCGTCAAACAGCaaagact                                                                                                                                          >  8:16537/1‑144 (MQ=255)           aaGCCCCAGCCGCCCAAGCCCGAGAAAAAGCCTGAGCCGCCGAAGGAAGCACCGCCCACCGAGCAAACGGTGGACGCACCGCCCAGCAACTCGCCACCGCAGAAGTCCGCGGCACCGGCACCGAGCATTGCGTCCAACAGCAACGCCtt                                                                                                                                         >  6:310684/1‑149 (MQ=255)            aGCCCCAGCCGCCCAAGCCCGATAAAAAGCCTGAGCCGCCGAAGTAAGCACCGCCCACCGAGCAAACGTTGGACGCAACGCCCACCAACTCGCCAACGCAGAAGTCCTCGGCACCGGCACCGAGCATTGCGTCCAACAGCAACGCCTTg                                                                                                                                        <  7:16537/149‑1 (MQ=255)            aGCCCCAGCCGCCCAAGCCCGAGAAAAAGCCTGAGCCGCCGAAGGAAGCACCGCCCACCGAGCAAACGGTGGACGCACCGCCCAGCAACTCGCCACCGCAGAAGTCCGCGGCACCGGCACCGAGCATTGCGTCCAACAGCAACGCCTTg                                                                                                                                        >  1:170723/1‑149 (MQ=255)                ccAGCCGCCCAAGCCCGAGAAAAAGCCTGAGCCGCCGAAGGAAGCACCGCCCACCGAGCAAACGGTGGACGCACCGCCCAGCAACTCGCCAACGCAGAAGTCCGCGGCACCGGCACCGAGCATTGCGTCCAACAGCAACGCCTTGCCaa                                                                                                                                    >  6:41467/1‑149 (MQ=255)                     cgccCAAGCCCGAGAAAAAGCCTGAGCCGCCGAAGGAAGCACCGCCCACCGAGCAAACGGTGGACGCACCGCCCAGCAACTCGCCACCGCAGAAGTCCGCGGCACCGGCACCGAGCATTGCGTCCAACAGCAACGCCTTGCCAACCTgg                                                                                                                               <  4:260385/149‑1 (MQ=255)                        ccAAGCCCGAGAAAAAGCCTGAGCCGCCGAAGGAAGCACCGCCCACCGAGCAAACGGTGGACGCACCGCCCAGCAACTCGCCACCGCAGAAGTCCGCGGCACCGGCACCGAGCATTGCGTCCAACAGCAACGCCtt                                                                                                                                         >  3:127276/1‑136 (MQ=255)                        ccAAGCCCGAGAAAAAGCCTGAGCCGCCGAAGGAAGCACCGCCCACCGAGCAAACGGTGGACGCACCGCCCAGCAACTCGCCACCGCAGAAGTCCGCGGCACCGGCACCGAGCATTGCGTCCAACAGCAACGCCtt                                                                                                                                         <  4:127276/136‑1 (MQ=255)                              ccGAGAAAAAGCCTGAGCCGCCGAAGGAAGCACCGCCCACCGAGCAAACGGTGGACGCACCGCCCAGCAACTCGCCACCGCAGAAGTCCGCGGCACCGGCACCGAGCATTGCGTCCAACAGCAACGCCTTGCCAACCTGGCAGAGCGAc                                                                                                                      >  6:204335/1‑149 (MQ=255)                              ccGAGAAAAAGCCTGAGCCGCCGAAGGAAGCACCGCCCACCGAGCAAACGGTGGACGCACCGCCCAGCAACTCGCCACCGCAGAAGTCCGCGGCACCGGCACCGAGCATTGCGTCCAACAGCAACGCCTTGCCAACCTGGCAGAGCGAc                                                                                                                      >  4:275347/1‑149 (MQ=255)                                     aaaGCCTGAGCCGCCGAAGGAAGCACCGCCCACCGAGCAAACGGTGGACGCACCGCCCAGCAACTCGCCACCGCAGAAGTCCGCGGCACCGGCACCGAGCATTGCGTCCAACAGCAACGCCTTGCCAACCTGGCAGAGCGACCtgctgc                                                                                                               >  3:192063/1‑149 (MQ=255)                                        gCCTGAGCCGCCGAAGGAAGCACCGCCCACCGAGCAAACGGTGGACGCACCGCCCAGCAACTCGCCACCGCAGAAGTCCGCGGCACCGGCACCGAGCATTGCGTCCAACAGCAACGCCTTGCCAACCTGGCAGAGCGACctgct                                                                                                                 >  8:85958/1‑144 (MQ=255)                                        gCCTGAGCCGCCGAAGGAAGCACCGCCCACCGAGCAAACGGTGGACGCACCGCCCAGCAACTCGCCACCGCAGAAGTCCGCGGCACCGGCACCGAGCATTGCGTCCAACAGCAACGCCTTGCCAACCTGGCAGAGCGACctgct                                                                                                                 <  7:85958/144‑1 (MQ=255)                                             aGCCGCCGAAGGAAGCACCGCCCACCGAGCAAACGGTGGACGCACCGCCCAGCAACTCGCCACCGCAGAAGTCCGCGGCACCGGCACCGAGCATTGCGTCCAACAGCAACGCCTTGCCAACCTGGCAGAGCGACCTGCTGCGCCACCtt                                                                                                       <  7:276080/149‑1 (MQ=255)                                                cgccgAAGGAAGCACCGCCCACCGAGCAAACGGTGGACGCACCGCCCAGCAACTCGCCACCGCAGAAGTCCGCGGCACCGGCACCGAGCATTGCGTCCAACAGCAACGCCTTGCCAACCTGGCAGAGCGACCTGCTGCGCCACCTTGcc                                                                                                    <  8:205288/149‑1 (MQ=255)                                                  ccgAAGGAAGCACCGCCCACCGAGCAAACGGTGGACGCACCGCCCAGCAACTCGCCACCGCAGAAGTCCGCGGCACCGGCACCGAGCATTGCGTCCAACAGCAACGCCTTGCCAACCTGGCAGAGCGACCTGCTGCGCCACCTTGcc                                                                                                    >  8:305192/1‑147 (MQ=255)                                                  ccgAAGGAAGCACCGCCCACCGAGCAAACGGTGGACGCACCGCCCAGCAACTCGCCACCGCAGAAGTCCGCGGCACCGGCACCGAGCATTGCGTCCAACAGCAACGCCTTGCCAACCTGGCAGAGCGACCTGCTGCGCCACCTTGCCaa                                                                                                  <  4:215406/149‑1 (MQ=255)                                                        gaagCACCGCCCACCGAGCAAACGGTGGACGCACCGCCCAGCAACTCGCCAACGCAGAAGTCCGCGGCACCGGCACCGAGCATTGCGTCCAACAGCAACGCCTTGCCAACCTGGCAGAGCGACCTGCTGCGCCACCTTGCCAAGTACaa                                                                                            <  5:41467/149‑1 (MQ=255)                                                          agCACCGCCCACCGAGCAAACGGTGGACGCACCGCCCAGCAACTCGCCACCGCAGAAGTCCGCGGCACCGGCACCGAGCATTGCGTCCAACAGCAACGCCTTGCCAACCTGGCAGAGCGACCTGCTGCGCCACCTTGCCAAGTACAAGc                                                                                          <  4:192063/149‑1 (MQ=255)                                                          agCACCGCCCACCGAGCAAACGGTGGACGCACCGCCCAGCAACTCGCCACCGCAGAAGTCCGCGGCACCGGCACCGAGCATTGCGTCCAACAGCAACGCCTTGCCAACCTGGCAGAGCGACCTGCTGCGCCACCTTGCCAAGTACAAGc                                                                                          >  3:123810/1‑149 (MQ=255)                                                               cGCCCACCGAGCAAACGGTGGACGCACCGCCCAGCAACTCGCCACCGCAGAAGTCCGCGGCACCGGCACCGAGCATTGCGTCCAACAGCAACGCCTTGCCAACCTGGCAGAGCGACCTGCTGCGCCACCTTGCCAAGTACAAGCGTTAc                                                                                     <  3:275347/149‑1 (MQ=255)                                                                gCCCACCGAGCAAACGGTGGACGCACCGCCCAGCAACTCGCCACCGCAGAAGTCCGCGGCACCGGCACCGAGCATTGCGTCCAACAGCAACGCCTTGCCAACCTGGCAGAGCGACCtgctgc                                                                                                               <  6:293795/122‑1 (MQ=255)                                                                gCCCACCGAGCAAACGGTGGACGCACCGCCCAGCAACTCGCCACCGCAGAAGTCCGCGGCACCGGCACCGAGCATTGCGTCCAACAGCAACGCCTTGCCAACCTGGCAGAGCGACCtgctgc                                                                                                               >  5:293795/1‑122 (MQ=255)                                                                 cccACCGAGCAAACGGTGGACGCACCGCCCAGCAACTCGCCACCGCAGAAGTCCGCGGCACCGGCACCGAGCATTGCGTCCAACAGCAACGCCTTGCCAACCTGGCAGAGCGACCTGCTGCGCCACCTTGcc                                                                                                    <  4:219936/132‑1 (MQ=255)                                                                 cccACCGAGCAAACGGTGGACGCACCGCCCAGCAACTCGCCACCGCAGAAGTCCGCGGCACCGGCACCGAGCATTGCGTCCAACAGCAACGCCTTGCCAACCTGGCAGAGCGACCTGCTGCGCCACCTTGcc                                                                                                    >  3:219936/1‑132 (MQ=255)                                                                     ccGAGCAAACGGTGGACGCACCGCCCAGCAACTCGCCACCGCAGAAGTCCGCGGCACCGGCACCGAGCATTGCGTCCAACAGCAACGCCTTGCCAACCTGGCAGAGCGACCTGCTGCGCCACCTTGCCAAGTACAAGCGTTACCCGGaa                                                                               <  7:305192/149‑1 (MQ=255)                                                                        aGCAAACGGTGGACGCACCGCCCAGCAACTCGCCACCGCAGAAGTCCGCGGCACCGGCACCGAGCATTGCGTCCAACAGCAACGCCTTGCCAACCTGGCAGAGCGACCTGCTGCGCCACCTTGCCAAGTACAAGCGTTACCCGGAAGAc                                                                            <  7:130994/149‑1 (MQ=255)                                                                              tgttggacgcaatgctcggtgccggtgccgcggacttctgcggtggcgagttgctgggcggtgcgtccaACAGCAACGCCTTGCCAACCTGGCAGAGCGACCTGCTGCGCCACCTTGCCAAGTACAAGCGTTACCCGGAAGACgcgcgc                                                                      >  3:96092‑M2/70‑149 (MQ=255)                                                                                   gacgcaatgctcggtgccggtgccgcggacttctgcggtggcgagttgctgggcggtgcgtccaACAGCAACGCCTTGCCAACCTGGCAGAGCGACCTGCTGCGCCAc                                                                                                          <  8:297191‑M2/44‑1 (MQ=255)                                                                                   gacgcaatgctcggtgccggtgccgcggacttctgcggtggcgagttgctgggcggtgcgtccaACAGCAACGCCTTGCCAACCTGGCAGAGCGACCTGCTGCGCCAc                                                                                                          >  7:297191‑M2/65‑108 (MQ=255)                                                                                    ACGCACCGCCCAGCAACTCGCCACCGCAGAAGTCCGCGGCACCGGCACCGAGCATTGCGTCCAACAGCAACGCCTTGCCAACCTGGCAGAGCGACCTGCTGCGCCACCTTGCCAAGTACAAGCGTTACCCGGAAGACGCGCGCCGTcgc                                                                >  4:123810‑M1/1‑149 (MQ=255)                                                                                      GCACCGCCCAGCAACTCGCCACCGCAGAAGTCCGCGGCACCGGCACCGAGCATTGCGTCCAACAGCAACGCCTTGCCAACCTGGCAGAGCGACCTGCTGCGCCGCCTTGCCAAGTACAAGCGTTACCCGGAAGACGCGCGCCGTcgcg                                                               >  6:187519‑M1/1‑148 (MQ=255)                                                                                      GCACCGCCCAGCAACTCGCCACCGCAGAAGTCCGCGGCACCGGCACCGAGCATTGCGTCCAACAGCAACGCCTTGCCAACCTGGCAGAGCGACCTGCTGCGCCGCCTTGCCAAGTACAAGCGTTACCCGGAAGACGCGCGCCGTcgcg                                                               <  5:187519‑M1/148‑1 (MQ=255)                                                                                       caatgctcggtgccggtgccgcggacttctgcggtggcgagttgctgggcggtgcgtccaACAGCAACGCCTTGCCAACCTGGCAGAGCGACCTGCTGCGCCACCTTGCCAAGTACAAGCGTTACCCGGAAGACGCGCGCCGTCGCGGc                                                             <  4:96092‑M2/89‑1 (MQ=255)                                                                                          cGCCCAGCAACTCGCCACCGCATAAGTCCGCGGAACCGGCACCGAGCATTGCGTCAAACAGCAACGCCTTGCCAACCTGGCAGAGCGACCTGCTGCGCCACCTTGCCAAGTACAAGCGTTACCCGGAAGACGCGCGCCGTCGCGGCCTg                                                          <  8:328769/149‑1 (MQ=255)                                                                                              cAGCAACTCGCCACCGCAGAAGTCCGCGGCACCGGCACCGAGCATTGCGTCCAACAGCAACGCCTTg                                                                                                                                        <  2:168898/67‑1 (MQ=255)                                                                                              cAGCAACTCGCCACCGCAGAAGTCCGCGGCACCGGCACCGAGCATTGCGTCCAACAGCAACGCCTTGCCAACCTGGCAGAGCGACCTGCTGCGCCACCTTGCCAAGTACAAGCGTTACCCGGAAGACGCGCGCCGTCGCGGCCTGCAAg                                                      <  5:204335/149‑1 (MQ=255)                                                                                                   aCTCGCCACCGCAGAAGTCCGCGGCACCGGCACCGAGCATTGCGTCCAACAGCAACGCCTTGCCAACCTGGCAGAGCGACCTGCTGCGCCACCTTGCCAAGTACAAGCGTTACCCGGAAGACGCGCGCCGTCGCGGCCTGCAAGGCAt                                                  >  1:274968/1‑148 (MQ=255)                                                                                                   aCTCGCCACCGCAGAAGTCCGCGGCACCGGCACCGAGCATTGCGTCCAACAGCAACGCCTTGCCAACCTGGCAGAGCGACCTGCTGCGCCACCTTGCCAAGTACAAGCGTTACCCGGAAGACGCGCGCCGTCGCGGCCTGCAAGGCATg                                                 <  2:170723/149‑1 (MQ=255)                                                                                                                  aGTCCGCGGCACCGGCACCGAGCATTGCGTCCAACAGCAACGCCTTGCCAACCTGGCAGAGCGACCTGCTGCGCCACCTTGCCAAGTACAAGCGTTACCCGGAAGACGCGCGCCGTCGCGGCCTGCAAGGCATGAACCGCCTACGCTTc                                  <  2:274968/149‑1 (MQ=255)                                                                                                                      cgcgGCACCGGCACCGAGCATTGCGTCCAACAGCAACGCCTTGCCAACCTGGCAGAGCGACCTGCTGCGCCACCTTGCCAAGTACAAGCGTTACCCGGAAGACGCGCGCCGTCGCGGCCTGCAAGGCATGAACCGCCTACGCTTCGTgg                              <  1:169678/149‑1 (MQ=255)                                                                                                                                    cgAGCATTGCGTCCAACAGCAACGCCTTGCCAACCTGGCAGAGCGACCTGCTGCGCCACCTTGCCAAGTACAAGCGTTACCCGGAAGACGCGCGCCGTCGCGGCCTGCAAGGCATGAACCGCCTACGCTTCGTGGTCGACGCCGAAgg                 >  5:113984/1‑148 (MQ=255)                                                                                                                                             cgtccaACAGCAACGCCTTGCCAACCTGGCAGAGCGACCTGCTGCGCCACCTTGCCAAGTACAAGCGTTACCCGGAAGACGCGCGCCGTCGCGGCCTGCAAGGCATGAACCGCCTACGCTTCGTGGTCGACGCCGAAGGCAAGgtcgt        <  5:310684‑M2/142‑1 (MQ=255)                                                                                                                                                  aACAGCAACGCCTTGCCAACCTGGCAGAGCGACCTGCTGCGCCACCTTGCCAAGTACAAGCGTTACCCGGAAGACGCGCGCCGTCGCGGCCTGCAAGGCATGAACCGCCTACGCTTCGTGGTCGACGCCGAAGGCAAGgtcgtgtcgt   >  3:265580‑M2/2‑148 (MQ=255)                                                                                                                                                  aACAGCAACGCCTTGCCAACCTGGCAGAGCGACCTGCTGCGCCACCTTGCCAAGTACAAGCGTTACCCGGAAGACGCGCGCCGTCGCGGCCTGCAAGGCATGAACCGCCTACGCTTCGTGGTCGACGCCGAAGGCAAGGTCGTGTCGTa  >  6:288369‑M2/2‑149 (MQ=255)                                                                                                                                                   |                                                                                                                                                    GCCGAAGGCCAAGCCCCAGCCGCCCAAGCCCGAGAAAAAGCCTGAGCCGCCGAAGGAAGCACCGCCCACCGAGCAAACGGTGGACGCACCGCCCAGCAACTCGCCACCGCAGAAGTCCGCGGCACCGGCACCGAGCATTGCGTCCAACAGCAACGCCTTGCCAACCTGGCAGAGCGACCTGCTGCGCCACCTTGCCAAGTACAAGCGTTACCCGGAAGACGCGCGCCGTCGCGGCCTGCAAGGCATGAACCGCCTACGCTTCGTGGTCGACGCCGAAGGCAAGGTCGTGTCGTA  >  NC_002947/6055329‑6055622

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.