| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 6080834 | 46 (0.870) | 4 (0.080) | 4/246 | NT | 8.5% | coding (778/897 nt) | PP_5332 | hypothetical protein |
| ? | NC_002947 | = 6080867 | 42 (0.820) | coding (811/897 nt) | PP_5332 | hypothetical protein | |||||
GGACCGGATCTACCTGAACACCCCGCAGACCCTCAGCATCGTCGACCCGCATTGGAATCGGCGGATTACCTTGACCAGCAGCGGCTCGCGCTCGGCGGTGATCTGGAACCCGTGGACCGAGCGGGCCAAGGAGCTGGCGGACATGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6080686‑6080834‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgTCTCGATGCACAGCATTCGCTGCCATCCATCGTCAGCCATGTCCGCCAGCTCCTTGGCCCGCTCGGTCCACGGGTTCCAGATCACCGCCGAGCGCGAGCCGCTGCTGGTCAAGGTAATCCGCCGATTCCAATGCGGGTCGACGATGCT < NC_002947/6080867‑6080720 GGACCGGATCTACCTGAACACCCCGCAGACCCTCAGCATCGTCGACCCGCATTGGAATCGGCGGATTACCTTGACCAGCAGCGGCTCGCGCTCGGCGGTGATCTGGAACCCGTGGACCGAGCGGGCCAAGGAGCTGGCGGACATGGCT > 5:83606/1‑148GGACCGGATCTACCTGAACACCCCGCAGACCCTCAGCATCGTCGACCAGCATTGGAATCGGCGGATTACCTTGACCAGCAGCGGCTCGCGCTCGGCGGTGATCTGGAACCCGTGGACCGAGCGGGCCAAGGAGCTGGCGGACATGGCT > 8:17159/1‑148 CCGCATTGGAATCGGCGGATTACCTTGACCAGCAGCGGCTCGCGCTCGGCGGTGATCTGGAACCCGTGGACCGAGCGGGCCAAGGAGCTGGCGGACATGGCTGTCTCGATGCACAGCATTCGCTGCCATCCATCGTCAGCCAT > 1:240671/1‑143 CCGCATTGGAATCGGCGGATTACCTTGACCAGCAGCGGCTCGCGCTCGGCGGTGATCTGGAACCCGTGGACCGAGCGGGCCAAGGAGCTGGCGGACATGGCTGTCTCGATGCACAGCATTCGCTGCCATCCATCGTCAGCCAT < 2:240671/143‑1 CTTGACCAGCAGCGGCTCGCGCTCGGCGGTGATCTGGAACCCGTGGACCGAGCGGGCCAAGGAGCTGGCGGACATGGCTGTCTCGATGCACAGCATTTGCTGCCATCCATCGTCAGCC < 5:11002/118‑1 CTTGACCAGCAGCGGCTCGCGCTCGGCGGTGATCTGGAACCCGTGGACCGAGCGGGCCAAGGAGCTGGCGGACATGGCTGTCTCGATGCACAGCATTAGCTGCCATCCATCGTCAGCC > 6:11002/1‑118 GCTGTCTCGATGCACAGCATTCGCTGCCATCCATCGTCAGCCATGTCCGCCAGCTCCTTGGCCCGCTCGGTCCACGGGTTCCAGATCACCGCCGAGCGCGAGCCGCTGCTGGTCAAGGTAATCCGCCGATTCCAATGCGGGTCGACGA < 5:314215/148‑1 GTCTCGATGCACAGCATTCGCTGCCATCCATCGTCAGCCATGTCCGCCAGCTCCTTGGCCCGCTCGGTCCACGGGTTCCAGATCACCGCCGAGCGCGAGCCGCTGCTGGTCAAGGTAATCCGCCGATTCCAATGCGGGTCGACGATGCT > 4:322714/1‑149 GGACCGGATCTACCTGAACACCCCGCAGACCCTCAGCATCGTCGACCCGCATTGGAATCGGCGGATTACCTTGACCAGCAGCGGCTCGCGCTCGGCGGTGATCTGGAACCCGTGGACCGAGCGGGCCAAGGAGCTGGCGGACATGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6080686‑6080834‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgTCTCGATGCACAGCATTCGCTGCCATCCATCGTCAGCCATGTCCGCCAGCTCCTTGGCCCGCTCGGTCCACGGGTTCCAGATCACCGCCGAGCGCGAGCCGCTGCTGGTCAAGGTAATCCGCCGATTCCAATGCGGGTCGACGATGCT < NC_002947/6080867‑6080720 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |