| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6116735 = | 36 (0.680) | 5 (0.100) | 5/242 | NT | 12.2% | coding (944/1401 nt) | lpd | dihydrolipoyl dehydrogenase |
| ? | NC_002947 | 6116768 = | 38 (0.760) | coding (977/1401 nt) | lpd | dihydrolipoyl dehydrogenase | |||||
CTCTTCAGTCTTGCCCACGGTGGCCATCTCCGGGCGGGTATAGATCACGCCAGGGATGAGGTTGTAGTTGACCTCGTGGGGCTTGCCGGCGATGCGTTCGATACAGGCCACCGCTTCGTCTTCGGCCTTGTGCGCCAGCATTGGGCCCGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6116886‑6116735‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgaagACGAAGCGGTGGCCTGTATCGAACGCATCGCCGGCAAGCCCCACGAGGTCAACTACAACCTCATCCCTGGCGTGATCTATACCCGCCCGGAGATGGCCACCGTGGGCAAGACTGAAGAGCAGCTCAAGGCCGAAGGACGTGCCTACAA > NC_002947/6116768‑6116915 CTCTTCAGTCTTGCCCACGGTGGCCATCTCCGGGCGGGTATAGATCACGCCAGGGATGAGGTTGTAGTTGACCTCGTGGGGCTCGCCGGCGATGCGTTCGATACAGGCCACCGCTTCGTCTTCGGCCTTGTGCGCCAGCATTGGGCCC < 8:31612/148‑1 TCTTCAGTCTTGCCCACGGTGGCCATCTCCGGGCGGGTATAGATCACGCCAGGGATGAGGTTGTAGTTGACCTCGTGGGGCTTGACGGCGATGCGTTCGATACAGGCCACCGCTTCGTCTTCGGCCTTGTGCGCCAGCATTGGGCCCG > 3:128997/1‑148 CTTCAGTCTTGCCCACGGTGGCCATCTCCGGGCGGGTATAGATCACGCCAGGGATGAGGTTGTAGTTGACCTCGTGGGGCTTGCCGGCGATGCGTTCGATACAGGCCACCGCTTCGTCTTCGGCCTTGTGCGCCAGCATTGGGCCCGAA < 4:304217/149‑1 GTCTTCGGCCTTGTGCGCCAGCATTGGGCCCGAAGACGAAGCGGTGGCCTGTATCGAACGCATCGCCGGCAAGCCCCACGAGGTCAACTACAACCTCATCCCTGGCGTGATCTATACCCGCCCGGAGATGGCCACCGTGGGCAAGACT > 7:286183/1‑148 TCTTCGGCCTTGTGCGCCAGCATTGGGCCCGAAGACGAAGCGGTGGCCTGTATCGAACGCATCGCCGGCAAGCCCCACGAGGTCAACTACAACCTCATCCCTGGC < 5:224078/105‑1 TCTTCGGCCTTGTGCGCCAGCATTGGGCCCGAAGACGAAGCGGTGGCCTGTATCGAACGCATCGCCGGCAAGCCCCACGAGGTCAACTACAACCTCATCCCTGGC > 6:224078/1‑105 CTTCGGCCTTGTGCGCCAGCATTGGGCCCGAAGACGAAGCGGTGGCCTGTATCGAACGCATCGCCGGCAAGCCCCACGAGGTCAACTACAACCTCATCCCTGGCGTGATCTATACCCGCCCGGA < 5:42709/124‑1 CTTCGGCCTTGTGCGCCAGCATTGGGCCCGAAGACGAAGCGGTGGCCTGTATCGAACGCATCGCCGGCAAGCCCCACGAGGTCAACTACAACCTCATCCCTGGCGTGATCTATACCCGCCCGGA > 6:42709/1‑124 AGACGAAGCGGTGGCCTGTATCGAACGCATCGCCGGCAAGCCCCACGAGGTCAACTACAACCTCATCCCTGGCGTGATCTATACCCGCCCGGAGATGGCCA < 3:337546/101‑1 AGACGAAGCGGTGGCCTGTATCGAACGCATCGCCGGCAAGCCCCACGAGGTCAACTACAACCTCATCCCTGGCGTGATCTATACCCGCCCGGAGATGGCCA > 4:337546/1‑101 GACGAAGCGGTGGCCTGTATCGAACGCATCGCCGGCAAGCCCCACGAGGTCAACTACAACCTCATCCCTGGCGTGATCTATACCCGCCCGGAGATGGCCACCGTGGGCAAGACTGAAGAGCAGCTCAAGGCCGAAGGACGTGCCTACAA < 6:309928/149‑1 CTCTTCAGTCTTGCCCACGGTGGCCATCTCCGGGCGGGTATAGATCACGCCAGGGATGAGGTTGTAGTTGACCTCGTGGGGCTTGCCGGCGATGCGTTCGATACAGGCCACCGCTTCGTCTTCGGCCTTGTGCGCCAGCATTGGGCCCGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6116886‑6116735‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgaagACGAAGCGGTGGCCTGTATCGAACGCATCGCCGGCAAGCCCCACGAGGTCAACTACAACCTCATCCCTGGCGTGATCTATACCCGCCCGGAGATGGCCACCGTGGGCAAGACTGAAGAGCAGCTCAAGGCCGAAGGACGTGCCTACAA > NC_002947/6116768‑6116915 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |