| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 35503 = | 56 (1.060) | 3 (0.060) | 3/242 | NT | 5.7% | coding (125/588 nt) | PP_0031 | hypothetical protein |
| ? | NC_002947 | 35545 = | 46 (0.910) | coding (83/588 nt) | PP_0031 | hypothetical protein | |||||
GTCGACTCCGCGGCATGCAGCTGAATACGCTGATGCAGCGGCGCGCAAGGCAACCTCCTCCGCGTTCGACCAAGCCTTCTCCGCCTTTCGCACCTCCTCCTGAATCTGCCGGCCGACAGCGTCCACCTGCTCCACCAGTTCGTTCGACCTCTCCAGAACAGCGCTGGAGGTGCGCGTCTGCGAGGTCAGCTCATCGAGCTGGACAGTGAGTTTTTCAGTGCAGCGGCGAAAGTCACCGATAGCAACTGCCCAGGGCTCTATGTCATTCATGGCTATCTCCTAGGGCGGC > NC_002947/35358‑35646 | acaattttgatatctagcgcgttaattcagcgcggcgttgttggccgccctaggagatagccatgaatgacatagagccctgggcagttgctatcggtgactttcgccgctgcactgaaaaactcactgtccagctcgatgagctGAc > 4:326359‑M1/146‑148 (MQ=255) gACTCCGCGGCATGCAGCTGAATACGCTGATGCAGCGGCGCGCAAGGCAACCTCCTCCGCGTTCGACCAAGCCTTCTCCGCCTTTCGCACCTCCTCCTGAATCTGCCGGCCGACAGCGTCCACCTGCTCCACCAGTTCGTTCGACctct > 1:131942/1‑149 (MQ=255) gcgGCATGCAGCTGAATACGCTGATGCAGCGGCGCGCAAGGCAACCTCCTCCGCGTTCGACCAAGCCTTCTCCGCCTTTCGCACCTCCTCCTGAATCTGCCGGCCGACAGCGTCCACCTGCTCCACCAGTTCGTTCGACCTCTCCAGaa < 2:131942/149‑1 (MQ=255) cgGCATGCAGCTGAATACGCTGATGCAGCGGCGCGCAAGGCAACCTCCTCCGCGTTCGACCAAGCCTTCTCCGCCTTTCGCACCTCCTCCTGAATCTGCCGGCCGACAGCGTCCACCTGCTCCACCAGTTCGTTCGACCTCTCCAGaa > 3:67523/1‑148 (MQ=255) gCAGCTGAATACGCTGATGCAGCGGCGCGCAAGGCAACCTCCTCCGCGTTCGCCCAAGCCTTCTCCGCCTTTCGCACCTCCTCCTGAATCTGCCGGCCGACAGCGTCCACCTGCTCCACCAGTTCGTTCGACCTCTcc > 1:138996/1‑138 (MQ=255) aGCTGAATACGCTGATGCAGCGGCGCGCAAGGCAACCTCCTCCGCGTTCGACCAAGCCTTCTCCGCCTTTCGCACCTCCTCCTGAATCTGCCGGCCGACAGCGTCCACCTGCTCCACCAGTTCGTTCGACCTCTCCAGAACAGCGCTg > 6:287240/1‑148 (MQ=255) aCGCTGATGCAGCGGCGCGCAAGGCAACCTCCTCCGCGTTCGACCAAGCCTTCTCCGCCTTTCGCACCTCCTCCTGAATCTGCCGGCCGACAGCGTCCACCTGCTCCACCAGTTCGTTCGACCTCTCCAGAAc < 5:287380/133‑1 (MQ=255) aCGCTGATGCAGCGGAGCGCAAGGCAACCTCCTCCGCGTTCGACCAAGCCTTCTCCGCCTTTCGCACCTCCTCCTGAATCTGCCGGCCGACAGCGTCCACCTGCTCCACCAGTTCGTTCGACCTCTCCAGAAc > 6:287380/1‑133 (MQ=255) cGCTGATGCAGCGGCGCGCAAGGCAACCTCCTCCGCGTTCGACCAAGCCTTCTCCGCCTTTCGCACCTCCTCCTGAATCTGCCGGCCGACAGCGTCCACCTGCTCCACCAGTTCGTTCGACCTCTCCAGAACAGCGCTGGAGGTgcgc < 5:287240/148‑1 (MQ=255) tGATGCAGCGGCGCGCAAGGCAACCTCCTCCGCGTTCGACCAAGCCTTCTCCGCCTTTCGCACCTCCTCCTGAATCTGCCGGCCGACAGCGTCCACCTGCTCCACCAGTTCGTTCGACCTCTCCAGAACAGCGCTGGAGGTGCGCGTCt > 1:302879/1‑149 (MQ=255) aTGCAGCGGCGCGCAAGGCAACCTCCTCCGCGTTCGACCAAGCCTTCTCCGCCTTTCGCACCTCCTCCTGAATCTGCCGGCCGACAGCGTCCACCTGCTCCACCAGTTCGTTCGACCTCTCCAGAACAGCGCTGGAGGTGCGCGTCt < 2:302879/147‑1 (MQ=255) gttggccgccctaggagatagccatgaatgacatagagccctgggcagttgctatcggtgactttcgccgctgcactgaaaaactcactgtccagctcgatgagctGACCTCTCCAGAACAGCGCTGGAGGTGCGCGTCTGCGAGGTc > 7:40939‑M1/107‑148 (MQ=255) aaGGCAACCTCCTCCGCGTTCGACCAAGCCTTCTCCGCCTTTCGCACCTCCTCCTGAATCTGCCGGCCGACAGCGTCCACCTGCTCCACCAGTTCGTTCGACCTCTCCAGAACAGCGCTGGAGGTGCGCGTCTGCGAGGTCAGCTCATc > 2:195077/1‑149 (MQ=255) gCAACCTCCTCCGCGTTCGACCAAGCCTTCTCCGCCTTTCGCACCTCCTCCTGAATCTGCCGGCCGACAGCGTCCACCTGCTCCACCAGTTCGTTCGACCTCTCCAGAACAGCGCTGGAGGTGCGCGTCTGCGAGGTCAGCTCATCGAg > 3:277975/1‑149 (MQ=255) cAACCTCCTCCGCGTTCGACCAAGCCTTCTCCGCCTTTCGCACCTCCTCCTGAATCTGCCGGCCGACAGCGTCCACCTGCTCCACCAGTTCGTTCGACCTCTCCAGAACAGCGCTGGAGGTGCGCGTCTGCGAGGTCAGCTCATCGAg < 4:277975/148‑1 (MQ=255) aaCCTCCTCCGCGTTCGACCAAGCCTTCTCCGCCTTTCGCACCTCCTCCTGAATCTGCCGGCCGACAGCGTCCACCTGCTCCACCAGTTCGTTCGACCTCTCCAGAACAGCGCTGGAGGTGCGCGTCTGCGAGGTCAGCTCATCGAGc > 4:128828/1‑148 (MQ=255) aaCCTCCTCCGCGTTCGACCAAGCCTTCTCCGCCTTTCGCACCTCCTCCTGAATCTGCCGGCCGACAGCGTCCACCTGCTCCACCAGTTCGTTCGACCTCTCCAGAACAGCGCTGGAGGTGCGCGTCTGCGAGGTCAGCTCATCGAGc < 3:128828/148‑1 (MQ=255) ctcctcCGCGTTCGACCAAGCCTTCTCCGCCTTTCGCACCTCCTCCTGAATCTGCCGGCCGACAGCGTCCACCTGCTCCACCAGTTCGTTCGACCTCTCCAGAACAGCGCTGGAGGTGCGCGTCTGCGAGGTCAGCTCATCGAGCTGGa < 6:176393/149‑1 (MQ=255) ctcctcCGCGTTCGACCAAGCCTTCTCCGCCTTTCGCACCTCCTCCTGAATCTGCCGGCCGACAGCGTCCACCTGCTCCACCAGTTCGTTCGACCTCTCCAGAACAGCGCTGGAGGTGCGCGTCTGCGAGGTCAGCTCATCGAGCTGGa < 4:67523/149‑1 (MQ=255) gACCAAGCCTTCTCCGCCTTTCGCACCTCCTCCTGAATCTGCCGGCCGACAGAGTCCACCTGCTCCACCAGTTCGTTCGACCTCTCCAGAACAGCGCTGGAGGTGCGCGTCTGCGAGGTCAGCTCATCGAGCTGGACAGTGAGttttt > 2:188920/1‑148 (MQ=255) aCCAAGCCTTCTCCGCCTTTCGCACCTCCTCCTGAATCTGCCGGCCGACAGCGTCCACCTGCTCCACCAGTTCGTTCGACCTCTCCAGAACAGCGCTGGAGGTGCGCGTCTGCGAGGTCAGCTCATCGAGCTGGACAGTGAGttttt > 1:37151/1‑147 (MQ=255) cAAGCCTTCTCCGCCTTTCGCACCTCCTCCTGAATCTGCCGGCCGACAGCGTCCACCTGCTCCACCAGTTCGTTCGACCTCTCCAGAACAGCGCTGGAGGTGCGCGTCTGCGAGGTCAGCTCATCGAGCTGGACAGTGAGTTTTTCAGt < 2:493/149‑1 (MQ=255) aaGCCTTCTCCGCCTTTCGCACCTCCTCCTGAATCTGCCGGCCGACAGCGTCCACCTGCTCCACCAGTTCGTTCGACCTCTCCAGAACAGCGCTGGAGGTGCGCGTCTGCGAGGTCAGCTCATCGAGCt < 2:59629/129‑1 (MQ=255) aaGCCTTCTCCGCCTTTCGCACCTCCTCCTGAATCTGCCGGCCGACAGCGTCCACCTGCTCCACCAGTTCGTTCGACCTCTCCAGAACAGCGCTGGAGGTGCGCGTCTGCGAGGTCAGCTCATCGAGCt > 1:59629/1‑129 (MQ=255) ttCTCCGCCTTTCGCACCTCCTCCTGAATCTGCCGGCCGACAGCGTCCACCTGCTCCACCAGTTCGTTCGACCTCTCCAGAACAGCGCTGGAGGTGCGCGTCTGCGAGGTCa < 7:247129/112‑1 (MQ=255) ttCTCCGCCTTTCGCACCTCCTCCTGAATCTGCCGGCCGACAGCGTCCACCTGCTCCACCAGTTCGTTCGACCTCTCCAGAACAGCGCTGGAGGTGCGCGTCTGCGAGGTCa > 8:247129/1‑112 (MQ=255) ccGCCTTTCGCACCTCCTCCTGAATCTGCCGGCCGACAGCGTCCACCTGCTCCACCAGTTCGTTCGACCTCTCCAGAACAGCGCTGGAGGTGCGCGTCTGCGAGGTCAg > 8:65238/1‑109 (MQ=255) ccGCCTTTCGCACCTCCTCCTGAATCTGCCGGCCGACAGCGTCCACCTGCTCCACCAGTTCGTTCGACCTCTCCAGAACAGCGCTGGAGGTGCGCGTCTGCGAGGTCAg < 7:65238/109‑1 (MQ=255) ccGCCTTTCGCACCTCCTCCTGAATCTGCCGGCCGACAGCATCCACCTGCTCCACCAGTTCGTTCGACCTCTCCAGAACAGCGCTGGAGGTGCGCGTCTGCGAGGTCAGCTCATCGAGCTGGACAGTGAGTTTTTCAGTGCAgcggcg > 2:300179/1‑148 (MQ=255) gCCTTTCGCACCTCCTCCTGAATCTGCCGGCCGACAGCGTCCACCTGCTCCACCAGTTCGTTCGACCTCTCCAGAACAGCGCTGGAGGTGCGCGTCTGCGAGGTCAGCTCATCGAGCTGGACAGTGAGTTTTTCAGTGCAGCGGCGa > 2:2395/1‑147 (MQ=255) cGCACCTCCTCCTGAATCTGCCGGCCGACAGCGTCCACCTGCTCCACCAGTTCGTTCGACCTCTCCAGAACAGCGCTGGAGGTGCGCGTCTGCGAGGTCAGCTCATCGAGCTGGACAGTGAGTTTTTCAGTGCAGCGGCGAAAGTCAc < 2:37151/148‑1 (MQ=255) cGCACCTCCTCCTGAATCTGCCGGCCGACAGCATCCACCTGCTCCACCAGTTCGTTCGACCTCTCCAGAACAGCGCTGGAGGTGCGCGTCTGCGAGGTCAGCTCATCGAGCTGGACAGTGAGTTTTTCAGTGCAGCGGCGAAAGTCAc < 1:300179/148‑1 (MQ=255) cctcctcctGAATCTGCCGGCCGACAGCGTCCACCTGCTCCACCAGTTCGTTCGACCTCTCCAGAACAGCGCTGGAGGTGCGCGTCTGCGAGGTCAGCTCATCGAGCTGGACAGTGAGTTTTTCAGTGCAGCGGCGAAAGTCACCGATa < 1:2395/149‑1 (MQ=255) ctcctcctGAATCTGCCGGCCGACAGCGTCCACCTGCTCCACCAGTTCGTTCGACCTCTCCAGAACAGCGCTGGAGGTGCGCGTCTGCGAGGTCAGCTCATCGAGCTGGACAGTGAGTTTTTCAGTGCAGCGGCGAAAg < 2:193095/139‑1 (MQ=255) ctcctcctGAATCTGCCGGCCGACAGCATCCACCTGCTCCACCAGTTCGTTCGACCTCTCCAGAACAGCGCTGGAGGTGCGCGTCTGCGAGGTCAGCTCATCGAGCTGGACAGTGAGTTTTTCAGTGCAGCGGCGAAAg > 1:193095/1‑139 (MQ=255) ctcctGAATCTGCCGGCCGACAGCGTCCACCTGCTCCACCAGTTCGTTCGACCTCTCCAGAACAGCGCTGGAGGTGCGCGTCTGCGAGGTCAGCTCATCGAGCTGGACAGTGAGTTTTTCAGTGCAgcgg < 5:316557/130‑1 (MQ=255) ctcctGAATCTGCCGGCCGACAGCGTCCACCTGCTCCACCAGTTCGTTCGACCTCTCCAGAACAGCGCTGGAGGTGCGCGTCTGCGAGGTCAGCTCATCGAGCTGGACAGTGAGTTTTTCAGTGCAgcgg > 6:316557/1‑130 (MQ=255) ctcctGAATCTGCCGGCCGACAGCGTCCACCTGCTCCACCAGTTCGTTCGACCTCTCCAGAACAGCGCTGGAGGTGCGCGTCTGCGAGGTCAGCTCATCGAGCTGGACAGTGAGTTTTTCAGTGCAGCGGCGAAAGTCACCGATAGCaa > 8:198630/1‑149 (MQ=255) cctGAATCTGCCGGCCGACAGCGTCCACCTGCTCCACCAGTTCGTTCGACCTCTCCAGAACAGCGCTGGAGGTGCGCGTCTGCGAGGTCAGCTCATCGAGCTGGACAGTGAGTTTTTCAGTGCAGCGGCGaaa > 1:205501/1‑133 (MQ=255) cctGAATCTGCCGGCCGACAGCGTCCACCTGCTCCACCAGTTCGTTCGACCTCTCCAGAACAGCGCTGGAGGTGCGCGTCTGCGAGGTCAGCTCATCGAGCTGGACAGTGAGTTTTTCAGTGCAGCGGCGaaa < 2:205501/133‑1 (MQ=255) ctGAATCTGCCGGCCGACAGCGTCCACCTGCTCCACCAGTTCGTTCGACCTCTCCAGAACAGCGCTGGAGGTGCGCGTCTGCGAGGTCAGCTCATCGAGCTGGACAGTGAGTTTTTCa < 7:317261/118‑1 (MQ=255) ctGAATCTGCCGGCCGACAGCGTCCACCTGCTCCACCAGTTCGTTCGACCTCTCCAGAACAGCGCTGGAGGTGCGCGTCTGCGAGGTCAGCTCATCGAGCTGGACAGTGAGTTTTTCa > 8:317261/1‑118 (MQ=255) ctGAATCTGCCGGCCGACAGCGTCCACCTGCTCCACCAGTTCGTTCGACCTCTCCAGAACAGCGCTGGAGGTGCGCGTCTGCGAGGTCAGCTCATCGAGCTGGACAGTGAGTTTTTCAGTGCAGCGGCGAAAGTCACCGATAGCAACTg > 8:105848/1‑149 (MQ=255) tttcgccgctgcactgaaaaactcactgtccagctcgatgagctGACCTCTCCAGAACAGCGCTGGAGGTGCGCGTCTGCGAGGTCAGCTCATCGAGCTGGACAGt > 4:93471‑M1/45‑106 (MQ=255) tttcgccgctgcactgaaaaactcactgtccagctcgatgagctGACCTCTCCAGAACAGCGCTGGAGGTGCGCGTCTGCGAGGTCAGCTCATCGAGCTGGACAGt < 3:93471‑M1/62‑1 (MQ=255) gAATCTGCCGGCCGACAGCGTCCACCTGCTCCACCAGTTCGTTCGACCTCTCCAGAACAGCGCTGGAGGTGCGCGTCTGCGAGGTCAGCTCATCGAGCTGGACAGt < 8:230240/106‑1 (MQ=255) gAATCTGCCGGCCGACAGCGTCCACCTGCTCCACCAGTTCGTTCGACCTCTCCAGAACAGCGCTGGAGGTGCGCGTCTGCGAGGTCAGCTCATCGAGCTGGACAGt > 7:230240/1‑106 (MQ=255) aaTCTGCCGGCCGACAGCGTCCACCTGCTCCACCAGTTCGTTCGACCTCTCCAGAACAGCGCTGGAGGTGCGCGTCTGCGAGGTCAGCTCATCGAGCTGGACAGTGAGTTTTTCAGTGCACCGGCGAAAGTCACCGATAGCAACTGccc < 1:195077/149‑1 (MQ=255) tCTGCCGGCCGACAGCGTCCACCTGCTCCACCAGTTCGTTCGACCTCTCCAGAACAGCGCTGGAGGTGCGCGTCt > 7:165514/1‑75 (MQ=255) tCTGCCGGCCGACAGCGTCCACCTGCTCCACCAGTTCGTTCGACCTCTCCAGAACAGCGCTGGAGGTGCGCGTCt < 8:165514/75‑1 (MQ=255) ccggccgACAGAGTCCACCTGCTCCACCAGTTCGTTCGACCTCTCCAGAACAGCGCTGGAGGTGCGCGTCTGCGAGGTCAGCTCATCGAGCTGGACAGTGAGTTTTTCAGTGCAGCGGCGAAAGTCACCGATAGCAACTGCCCAggg < 1:188920/147‑1 (MQ=255) gACAGCGTCCACCTGCTCCACCAGTTCGTTCGACCTCTCCAGAACAGCGCTGGAGGTGCGCGTCTGCGAGGTCAGCTCATCGAGCTGGACAGTGAGTTTTTCAGTGCAGCGGCGAAAGTCACCGATAGCAACTGCCCAGGGCTCTATGt > 1:3893/1‑149 (MQ=255) gTCCACCTGCTCCACCAGTTCGTTCGACCTCTCCAGAACAGCGCTGGAGGTGCGCGTCTGCGAGGTCAGCTCATCGAGCTGGACAGTGAGTTTTTCAGTGCAGCGGCGAAAGTCa < 5:74332/115‑1 (MQ=255) gTCCACCTGCTCCACCAGTTCGTTCGACCTCTCCAGAACAGCGCTGGAGGTGCGCGTCTGCGAGGTCAGCTCATCGAGCTGGACAGTGAGTTTTTCAGTGCAGCGGCGAAAGTCa > 6:74332/1‑115 (MQ=255) gTCCACCTGCTCCACCAGTTCGTTCGACCTCTCCAGAACAGCGCTGGAGGTGCGCGTCTGCGAGGTCAGCTCATCGAGCTGGACAGTGAGTTTTTCAGTGCAGCGGCGAAAGTCACCGATAGCAACTGCCCAGGGCTCTATGtcattca > 2:305911/1‑149 (MQ=255) cACCTGCTCCACCAGTTCGTTCGACCTCTCCAGAACAGCGCTGGAGGTGCGCGTCTGCGAGGTCAGCTCATCGAGCCGGACAGTGAGTTTTTCAGTGCAGCGGCGAAAGTCACCGATAGCAACt < 7:200187/124‑1 (MQ=255) cACCTGCTCCACCAGTTCGTTCGACCTCTCCAGAACAGCGCTGGAGGTGCGCGTCTGCGAGGTCAGCTCATCGAGCCGGACAGTGAGTTTTTCAGTGCAGCGGCGAAAGTCACCGATAGCAACt > 8:200187/1‑124 (MQ=255) cTCCACCAGTTCGTTCGACCTCTCCAGAACAGCGCTGGAGGTGCGCGTCTGCGAGGTCAGCTCATCGAGCTGGACAGTGAGTTTTTCAGTGCAGCGGCGAAAGTCACCGATAGCAACTGCCCAGGGCTCTATGTCATTCATGGCTAtc < 1:305911/148‑1 (MQ=255) caccaGTTCGTTCGACCTCTCCAGAACAGCGCTGGAGGTGCGCGTCTGCGAGGTCAGCTCATCGAGCTGGACAGTGAGTTTTTCAGTGCAGCGGCGAAAGTCACCGATAGCAACTGCCCAGGGCTCTATGTCATTCATGGCTATCTcc > 8:80378/1‑148 (MQ=255) accaGTTCGTTCGACCTCTCCAGAACAGCGCTGGAGGTGCGCGTCTGCGAGGTCAGCTCATCGAGCTGGACAGTGAGTTTTTCAGTGCAGCGGCGAAAGTCACCGATAGCAACTGCCCAGGGCTCTATGTCATTCATGGCTATCTcc > 5:106517/1‑147 (MQ=255) gttcgACCTCTCCAGAACAGCGCTGGAGGTGCGCGTCTGCGAGGTCAGCTCATCGAGCTGGACAGTGAGTTTTTCAGTGCAGCGGCGAAAGTCACCGATAGCAACTGCCCAGGGCTCTATGTCATTCATGGCTATCTCCTAGggcggc < 2:3893/148‑1 (MQ=255) | GTCGACTCCGCGGCATGCAGCTGAATACGCTGATGCAGCGGCGCGCAAGGCAACCTCCTCCGCGTTCGACCAAGCCTTCTCCGCCTTTCGCACCTCCTCCTGAATCTGCCGGCCGACAGCGTCCACCTGCTCCACCAGTTCGTTCGACCTCTCCAGAACAGCGCTGGAGGTGCGCGTCTGCGAGGTCAGCTCATCGAGCTGGACAGTGAGTTTTTCAGTGCAGCGGCGAAAGTCACCGATAGCAACTGCCCAGGGCTCTATGTCATTCATGGCTATCTCCTAGGGCGGC > NC_002947/35358‑35646 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |