| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1358263 | 57 (1.080) | 5 (0.100) | 5/244 | NT | 7.7% | coding (1444/1608 nt) | PP_1182 | sensor histidine kinase |
| ? | NC_002947 | = 1358320 | 65 (1.280) | coding (1501/1608 nt) | PP_1182 | sensor histidine kinase | |||||
CTTGTCGGCAATGCCATGCGCCATGCCGAGGGCGAAGTGCGCCTGAGCTATCAGCTGGGCCAGCAACGTTGCCGTATCGATGTGGAGGATGACGGCCCGGGGATCCCCGAGGGCTTCTGGGACCGCATCTTCACGCCCTTCACCCGCCTCGATGACAGCCGTACCCGTGCCTCGGGCGGGCACGGGTTGGGCTTGTCGATCGTACGGCGGATCATCTACTGGCACGCGGGCCGGGCCACAGTGGGCCGCAGCGAGGCGTTGGGCGGTGCCTGCTTCAGCCTGAACTGGCCAAGG > NC_002947/1358116‑1358409 | cTTGTCGGCAATGCCATGCGCCATGCCGAGGGCGAAGTGCGCCTGAGCTATCAGCTGGGCCAGCAACGTTGCCGTATCGATGTGGAGGATGACGGCCCGGGGATCCCCGAGGGCTTCTGGGACCGCATCTTCACGCCCTTCACCCGCCg > 3:197329‑M1/1‑148 (MQ=255) ttGTCGGCAATGCCATGCGCCATGCCGAGGGCGAAGTGCGCCTGAGCTATCAGCTGGGCCAGCAACGTTGCCGTATCGATGTGGAGGATGACGGCCCGGGGATCCCCGAGGGCTTCTGGGACCGCATCTTCACGCCCTTCACCCGCCTc > 4:74952/1‑149 (MQ=255) ttGTCGGCAATGCCATGCGCCATGCCGAGGGCGAAGTGCGCCTGAGCTATCAGCTGGGCCAGCAACGTTGCCGTATCGATGTGGAGGATGACGGCCCGGGGATCCCCGAGGGCTTCTGGGACCGCATCTTCACGCCCTTCACCCGCCTc > 4:176505/1‑149 (MQ=255) gTCGGCAATGCCATGCGCCATGCCGAGGGCGAAGTGCGCCTGAGCTATCAGCTGGGCCAGCAACGTTGCCGTATCGATGTGGAGGATGACGGCCCGGGGATCCCCGAGGGCTTCTGGGACCGCATCTTCACGCCCTTCACCCGCCTc < 2:71954/147‑1 (MQ=255) ggCAATGCCATGCGCCATGCCGAGGGCGAAGTGCGCCTGAGCTATCAGCTGGGCCAGCAACGTTGCCGTATCGATGTGGAGGATGACGGCCCGGGGATCCCCGAGGGCTTCTGGGACCGCATCTTCACGCCCTTCACCCGCCTCGATGa < 2:204769/149‑1 (MQ=255) gCAATGCCATGCGCCATGCCGAGGGCGAAGTGCGCCTGAGCTATCAGCTGGGCCAGCAACGTTGCCGTATCGATGTGGAGGATGACGGCCCGGGGATCCCCGAGGGCTTCTGGGACCGCATCTTCACGCCCTTCACCCGCCTCGATGa > 5:15178/1‑148 (MQ=255) tGCCATGCGCCATGCCGAGGGCGAAGTGCGCCTGAGCTATCAGCTGGGCCAGCAACGTTGCCGTATCGATGTGGAGGATGACGGCCCGGGGATCCCCGAGGGCTTCTGGGACCGCATCTTCACGCCCTTCACCCGCCTCGATGACAGcc < 3:74952/149‑1 (MQ=255) atgcgccatgcCGAGGGCGAAGTGCGCCTGAGCTATCAGCTGGGCCAGCAACGTTGCCGTATCGATGTGGAGGATGACGGCCCGGGGATCCCCGAGGGCTTCTGGGACCGCATCTTCACGCCCTTCACCCGCCTCGATGACAGCCGTAc > 5:168536/1‑149 (MQ=255) gccatgcCGAGGGCGAAGTGCGCCTGAGCTATCAGCTGGGCCAGCAACGTTGCCGTATCGATGTGGAGGATGACGGCCCGGGGATCCCCGAGGGCTTCTGGGACCGCATCTTCACGCCCTTCACCCGCCTCGATGACAGCCGTACCCGt < 1:17146/149‑1 (MQ=255) ccGAGGGCGAAGTGCGCCTGAGCTATCAGCTGGGCCAGCAACGTTGCCGTATCGATGTGGAGGATGACGGCCCGGGGATCCCCGAGGGCTTCTGGGACCGCATCTTCACGCCCTTCACCCGCCTCGATGACAGCCGTACCCGTGCCTcg > 2:4898/1‑149 (MQ=255) cGAGGGCGAAGTGCGCCTGAGCTATCAGCTGGGCCAGCAACGTTGCCGTATCGATGTGGAGGATGACGGCCCGGGGATCCCCGAGGGCTTCTGGGACCGCATCTTCACGCCCTTCACCCGCCTCGATGACAGCCGTACCCGTGCCTcgg > 5:138923/1‑149 (MQ=255) gAGGGCGAAGTGCGCCTGAGCTATCAGCTGGGCCAGCAACGTTGCCGTATCGATGTGGAGGATGACGGCCCGGGGATCCCCGAGGGCTTCTGGGACCGCATCTTCACGCCCTTCACCCGCCTCGATGACAGCCGTACCCGTGCCTcggg > 7:325438/1‑149 (MQ=255) gTGCGCCTGAGCTATCAGCTGGGCCAGCAACGTTGCCGTATCGATGTGGAGGATGACGGCCCGGGGATCCCCGAGGGCTTCTGGGACCGCATCTTCACGCCCTTCACCCGCCTCGATGACAGCCGTACCCGTGCCTCGGGCGGGCACgg < 2:182816/149‑1 (MQ=255) gTGCGCCTGAGCTATCAGCTGGGCCAGCAACGTTGCCGTATCGATGTGGAGGATGACGGCCCGGGGATCCCCGAGGGCTTCTGGGACCGCATCTTCACGCCCTTCACCCGCCTCGATGACAGCCGTACCCGTGCCTCGGGCGGGCACgg < 6:15178/149‑1 (MQ=255) ccTGAGCTATCAGCTGGGCCAGCAACGTTGCCGTATCGATGTGGAGGATGACGGCCCGGGGATCCCCGAGGGCTTCTGGGACCGCATCTTCACGCCCTTCACCCGCCTCGATCACAGCCGTACCCGTGCCACGGGCGGGCACGGGTTgg > 3:282023/1‑149 (MQ=255) cTGAGCTATCAGCTGGGCCAGCAACGTTGCCGTATTGATGTGGAGGATGACGGCCCGGGGATCCCCGAGGGCTTCTGGGACCGCATCTTCACGCCCTTCACCCGCCTCGATGACAGCCGTACCCGTGCCTCGGGCGGGCACGGGTTggg < 7:274664/149‑1 (MQ=255) tGAGCTATCAGCTGGGCCAGCAACGTTGCCGTATCGATGTGGAGGATGACGGCCCGGGGATCCCCGAGGGCTTCTGGGACCGCATCTTCACGCCCTTCACCCGCCTCGATGACAGCCGTACCCGTGCCTCGGGCGGGCACggg < 7:197007/143‑1 (MQ=255) tGAGCTATCAGCTGGGCCAGCAACGTTGCCGTATCGATGTGGAGGATGACGGCCCGGGGATCCCCGAGGGCTTCTGGGACCGCATCTTCACGCCCTTCACCCGCCTCGATGACAGCCGTACCCGTGCCTCGGGCGGGCACggg > 8:197007/1‑143 (MQ=255) tGAGCTATCAGCTGGGCCAGCAACGTTGCCGTATCGATGTGGAGGATGACGGCCCGGGGATCCCCGAGGGCTTCTGGGACCGCATCTTCACGCCCTTCACCCGCCTCGATGACAGCCGTACCCGTGCCTCGGGCGGGCACGGGTTGGGc > 7:139342/1‑149 (MQ=255) gAGCTATCAGCTGGGCCAGCAACGTTGCCGTATCGATGTGGAGGATGACGGCCCGGGGATCCCCGAGGGCTTCTGGGACCGCATCTTCACGCCCTTCACCCGCCTCGATGACAGCCGTACCCGTGCCTCGGGCGGGCACgg > 2:342870/1‑141 (MQ=255) gAGCTATCAGCTGGGCCAGCAACGTTGCCGTATCGATGTGGAGGATGACGGCCCGGGGATCCCCGAGGGCTTCTGGGACCGCATCTTCACGCCCTTCACCCGCCTCGATGACAGCCGTACCCGTGCCTCGGGCGGGCACgg < 1:342870/141‑1 (MQ=255) tATCAGCTGGGCCAGCAACGTTGCCGTATCGATGTGGAGGATGACGGCCCGGGGATCCCCGAGGGCTTCTGGGACCGCATCTTCACGCCCTTCACCCGCCTCGATGACAGCCGTACCCGTGCCTCGGGCGGGCACGGGTTgg > 5:206495/1‑142 (MQ=255) tATCAGCTGGGCCAGCAACGTTGCCGTATCGATGTGGAGGATGACGGCCCGGGGATCCCCGAGGGCTTCTGGGACCGCATCTTCACGCCCTTCACCCGCCTCGATGACAGCCGTACCCGTGCCTCGGGCGGGCACGGGTTgg < 6:206495/142‑1 (MQ=255) gCTGGGCCAGCAACGTTGCCGTATCGATGTGGAGGATGACGGCCCGGGGATCCCCGAGGGCTTCTGGGACCGCATCTTCACGCCCTTCACCCGCCTCGATGACAGCCGTACCCGTGCCTCGGGCGGGCACGGGTTGGGCTTGTCGATCg > 4:241631/1‑149 (MQ=255) gCTGGGCCAGCAACGTTGCCGTATCGATGTGGAGGATGACGGCCCGGGGATCCCCGAGGGCTTCTGGGACCGCATCTTCACGCCCTTCACCCGCCTCGATGACAGCCGTACCCGTGCCTCGGGCGGGCACGGGTTGGGCTTGTCGATCg > 8:322016/1‑149 (MQ=255) gCAACGTTGCCGTATCGATGTGGAGGATGACGGCCCGGGGATCCCCGAGGGCTTCTGGGACCGCATCTTCACGCCCTTCACCCGCCTCGATGACAGCCGTACCCGTGCCTCGGGCGGGCACGGGTTGGGCTTGTCGATCGTACGGCGGa < 5:182922/149‑1 (MQ=255) aaCGTTGCCGTATCGATGTGGAGGATGACGGCCCGGGGATCCCCGAGGGCTTCTGGGACCGCATCTTCACGCCCTTCACCCGCCgtacgatcgacaagcccaacccgtgcccgcccgaggcacgggtacggctgtcatcgaggcgggtg < 4:197329‑M1/149‑66 (MQ=255) ccGTATCGATGTGGAGGATGACGGCCCGGGGATCCCCGAGGGCTTCTGGGACCGCATCTTCACGCCCTTCACCCGCCTCGATGACAGCCGTACCCGTGCCTCGGGCGGGCACGGGTTGGGCTTGTCGATCGTACGGCGGATCATCTAc < 8:139342/148‑1 (MQ=255) cGTATCGATGTGGAGGATGACGGCCCGGGGATCCCCGAGGGCTTCTGGGACCGCATCTTCACGCCCTTCACCCGCCTCGATGACAGCCGTACCCGTGCCTCGGGCGGGCACGGGTTGGGCTTGTCGATCGTACGGCGGATCATCTACTg < 8:325438/149‑1 (MQ=255) cttgcggaggaTGACGGCGCGGGGATCCCCGAGGGCTTCTGGGACCGCATCTTCACGCCCTTCACCCGCCTCGATGACAGCCGTACCCGTGCCTCGGGCGGGCACGGGTTGGGCTTGTCGATCGTACGGCGGATCATCTACTGGCAcgc < 4:282023/144‑1 (MQ=255) tgGAGGATGACGGCCCGGGGATCCCCGAGGGCTTCTGGGACCGCATCTTCACGCCCTTCACCCGCCTCGATGACAGCCGTACCCGTGCCTCGGGCGGGCACGGGTTGGGCTTGTCGATCGTACGGCGGATCATCTACTGGCACGcgggc > 1:121237/1‑149 (MQ=255) tgGAGGATGACGGCCCGGGGATCCCCGAGGGCTTCTGGGACCGCATCTTCACGCCCTTCACCCGCCTCGATGACAGCCGTACCCGTGCCTCGGGCGGGCACGGGTTGGGCTTGTCGATCGTACGGCGGATCATCTACTGGCACGcggg < 1:4898/148‑1 (MQ=255) aggaTGACGGCCCGGGGATCCCCGAGGGCTTCTGGGACCGCATCTTCACGCCCTTCACCCGCCTCGATGACAGCCGTACCCGTGCCTCGGGCGGGCACGGGTTGGGCTTGTCGATCGTACGGCGGATCATCTACTGGCACGcgggccgg < 1:148570/149‑1 (MQ=255) ggaTGACGGCCCGGGGATCCCCGAGGGCTTCTGGGACCGCATCTTCACGCCCTTCACCCGCCTCGATGACAGCCGTACCCGTGCCTCGGGCGGGCACGGGTTGGGCTTGTCGATCGTACGGCGGATCATCTACTGGCACGcgggccggg > 6:21981/1‑149 (MQ=255) gACGGCCCGGGGATCCCCGAGGGCTTCTGGGACCGCATCTTCACGCCCTTCACCGGCCTCGATGACAGCCGTACCCGTGCCTCGGGCGGGCACGGGTTGGGCTTGTCGATCGTACGGCGGATCATCTACTGGCACGCGGGCCGGGCca < 6:138923/148‑1 (MQ=255) ggCCCGGGGATCCCCGAGGGCTTCTGGGACCGCATCTTCACGCCCTTCACCCGCCTCGATGACAGCCGTACCCGTGCCTCGGGCGGGCACGGGTTGGGCTTGTCGATCGTAc < 4:109624/112‑1 (MQ=255) ggCCCGGGGATCCCCGAGGGCTTCTGGGACCGCATCTTCACGCCCTTCACCCGCCTCGATGACAGCCGTACCCGTGCCTCGGGCGGGCACGGGTTGGGCTTGTCGATCGTAc > 3:109624/1‑112 (MQ=255) cccGGGGATCCCCGAGGGCTTCTGGGACCGCATCTTCACGCCCTTCACCCGCCTCGATGACAGCCGTACCCGTGCCTCGGGCGGGCACGGGTTGGGCTTGTCGATCGTACGGCGGATCATCTACTGGCACGCGGGCCGGGCCACAGTgg < 2:121237/149‑1 (MQ=255) ccGGGGATCCCCGAGGGCTTCTGGGACCGCATCTTCACGCCCTTCACCCGCCTCGATGACAGCCGTACCCGTGCCTCGGGCGGGCACGGGTTGGGCTTGTCGATCGTACGGTGGatcatc < 1:216520/120‑1 (MQ=255) ccGGGGATCCCCGAGGGCTTCTGGGACCGCATCTTCACGCCCTTCACCCGCCTCGATGACAGCCGTACCCGTGCCTCGGGCGGGCACGGGTTGGGCTTGTCGATCGTACGGTGGatcatc > 2:216520/1‑120 (MQ=255) ccccGAGGGCTTCTGGGACCGCATCTTCACGCCCTTCACCCGCCTCGATGACAGCCGTACCCGTGCCTCGGGCGGGCACGGGTTGGGCTTGTCGATCGTACGGCGGATCATCTACTGGCACGCGGGCCGGGCCACAGTGGGCCGCAGCg > 3:240832/1‑149 (MQ=255) ccGAGGGCTTCTGGGACCGCATCTTCACGCCCTTCACCCGCCtcgatgacagcccaacccgtgcccgcccgaggcacgggtacggctgtcatcg > 7:98273‑M1/1‑42 (MQ=255) ccGAGGGCTTCTGGGACCGCATCTTCACGCCCTTCACCCGCCtcgatgacagcccaacccgtgcccgcccgaggcacgggtacggctgtcatcg < 8:98273‑M1/94‑53 (MQ=255) ccGAGGGCTTCTGGGACCGCATCTTCACGCCCTTCACCCGCCTCGATGACAGCCGTACCCGTGCCTCGGGCGGGCACGGGTTGGGCTTGTCGATCGTACGGCGGATCATCTACTGGCACGCGGGCCGGGCCACAGTGGGCCGCAGc > 1:90356/1‑146 (MQ=255) ccGAGGGCTTCTGGGACCGCATCTTCACGCCCTTCACCCGCCTCGATGACAGCCGTACCCGTGCCTCGGGCGGGCACGGGTTGGGCTTGTCGATCGTACGGCGGATCATCTACTGGCACGCGGGCCGGGCCACAGTGGGCCGCAGCGa < 2:90356/148‑1 (MQ=255) ccGAGGGCTTCTGGGACCGCATCTTCACGCCCTTCACCCGCCTCGATGACAGCCGTACCCGTGCCTCGGGCGGGCACGGGTTGGGCTTGTCGATCGTACGGCGGATCATCTACTGGCACGCGGGCCGGGCCACAGTGGGCCGCAGCGAg > 5:109433/1‑149 (MQ=255) ccGAGGGCTTCTGGGACCGCATCTTCACGCCCTTCACCCGCCTCGATGACAGCCGTACCCGTGCCTCGGGCGGGCACGGGTTGGGCTTGTCGATCGTACGGCGGATCATCTACTGGCACGCGGGCCGGGCCACAGTGGGCCGCAGCGAg < 7:322016/149‑1 (MQ=255) cGAGGGCTTCTGGGACCGCATCTTCACGCCCTTCACCCGCCgtacgatcgacaagcccaacccgtgcccgcccgaggcacgggtacggctgtcatcgaggcgggtgaagggcgtgaagat > 4:145444‑M1/1‑41 (MQ=255) cGAGGGCTTCTGGGACCGCATCTTCACGCCCTTCACCCGCCgtacgatcgacaagcccaacccgtgcccgcccgaggcacgggtacggctgtcatcgaggcgggtgaagggcgtgaagat < 3:145444‑M1/120‑80 (MQ=255) cGAGGGCTTCTGGGACCGCATCTTCACGCCCTTCACCCGCCTCGATGACAGCCGTACCCGTGCCTCGGGCGGGCACGGGTTGGGCTTGTCGATCGTACGGCGGATCATCTACTGGCACGCGGGCCGGGCCACAGTGGGCCGCAGCGAgg > 4:103412/1‑149 (MQ=255) ggCTTCTGGGACCGCATCTTCACGCCCTTCACCCGCCTCGATGACAGCCGTACCCGTGCCTCGGGCGGGCACGGGTTGGGCTTGTCGATCGTACGGCGGATCATCTACTGGCACGCGGGCCGGGCCACAGTGGGCCGCAGCGAGGCGtt < 5:21981/149‑1 (MQ=255) ggCTTCTGGGACCGCATCTTCACGCCCTTCACCCGCCTCGATGACAGCCGTACCCGTGCCTCGGGCGGGCACGGGTTGGGCTTGTCGATCGTACGGCGGATCATCTACTGGCACGCGGGCCGGGCCACAGTGGGCCGCAGCGAGGCGt < 6:109433/148‑1 (MQ=255) ggACCGCATCTTCACGCCCTTCACCCGCCTCGATGACAGCCGTACCCGTGCCTCGGGCGGGCACGGGTTGGGCTTGTCGATCGTACGGCGGATCATCTACTGGCACGCGGGCCGGGCCACAGTGGGCCGCAGCGAGGCGTTGGGCg < 3:103412/146‑1 (MQ=255) ggACCGCATCTTCACGCCCTTCACCCGCCTCGATGACAGCCGTACCCGTGCCTCGGGCGGGCACGGGTTGGGCTTGTCGATCGTACGGCGGATCATCTACTGGCACGCGGGCCGGGCCACAGTGGGCCGCAGCGAGGCGTTGGGCGGt < 4:240832/148‑1 (MQ=255) aCCGCATCTTCACGCCCTTCACCCGCCTCGATGACAGCCGTACCCGTGCCTCGGGCGGGCACGGGTTGGGCTTGTCGATCGTACGGCGGATCATCTACTGGCACGCGGGCCGGGCCACAGTg < 8:184196/122‑1 (MQ=255) cATCTTCACGCCCTTCCCCCGCCTCGATGACAGCCGTACCCGTGCCTCGGGCGGGCACGGGTTGGGCTTGTCGATCGTACGGCGGATCATCTACTGGCACGcgggccggg > 2:230011/1‑110 (MQ=255) cATCTTCACGCCCTTCACCCGCCTCGATGACAGCCGTACCCGTGCCTCGGGCGGGCACGGGTTGGGCTTGTCGATCGTACGGCGGATCATCTACTGGCACGcgggccggg < 1:230011/110‑1 (MQ=255) aTCTTCACGCCCTTCACCCGCCTCGATGACAGCCGTACCCGTGCCTCGGGCGGGCACGGGTTGGGCTTGTCGATCGTACggcgggtgaagggcgtgaagatgcggtcccagaagccctcg < 3:145444‑M2/120‑42 (MQ=255) aTCTTCACGCCCTTCACCCGCCTCGATGACAGCCGTACCCGTGCCTCGGGCGGGCACGGGTTGGGCTTGTCGATCGTACggcgggtgaagggcgtgaagatgcggtcccagaagccctcg > 4:145444‑M2/1‑79 (MQ=255) aTCTTCACGCCCTTCACCCGCCTCGATGACAGCCGTACCCGTGCCTCGGGCGGGCACGGGTTGGGCTTGTCGATCGTACGGCGGATCATCTACTGGCACGCGGGCCGGGCCACAGTGGGCCGCAGCGAGGCGTTGGGCGGTGCCTGCtt > 3:152172/1‑149 (MQ=255) tCTTCACGCCCTTCACCCGCCTCGATGACAGCCGTACCCGTGCCTCGGGCGGGCACGGGTTGGGCTTGTCGATCGTACGGCGGATCATCTACTGGCACGCGGGCCGGGCCACAGTGGGCCGCAGCGAGGCGTTGGGCGGTGCCTGCtt > 3:89329/1‑148 (MQ=255) tCACGCCCTTCACCCGCCTCGATGACAGCCGTACCCGTGCCTCGGGCGGGCACGGGTTGGGCTTGTCGATCGTACGGCGGATCATCTACTGGCACGCGGGCCGGGCCACAGTGGGCCGCa < 1:176211/120‑1 (MQ=255) tCACGCCCTTCACCCGCCTCGATGACAGCCGTACCCGTGCCTCGGGCGGGCACGGGTTGGGCTTGTCGATCGTACGGCGGATCATCTACTGGCACGCGGGCCGGGCCACAGTGGGCCGCa > 2:176211/1‑120 (MQ=255) cACGCCCTTCACCCGCCTCGATGACAGCCGTACCCGTGCCTCGGGCGGGCACGGGTTGGGCTTGTCGATCGTACGGCGGATCATCTACTGGCACGCGGGCCGGGCCACAGTGGGCCGCAGCGAGGCGTTGGGCGGTGCCTGCTTCAGcc > 1:51868/1‑149 (MQ=255) aCGCCCTTCACCCGCCTCGATGACAGCCGTACCCGTGCCTCGGGCGGGCACGGGTTGGGCTTGTCGATCGTACGGCGGATCATCTACTGGCACGCGGGCCGGGCCACAGTGGGCCGCAGCGAGGCGTTGGGCGGTGCCTGCTTCAGCCt > 7:4591/1‑149 (MQ=255) cccTTCACCCGCCTCGATGACAGCCGTACCCGTGCCTCGGGCGGGCACGGGTTGGGCTTGTCGATCGTACGGCGGATCATCTACTGGCACGCGGGCCGGGCCACAGTGGGCCGCAGCGAGGCGTTGGGCGGTGCCTGCTTCAGCCTGaa < 3:241631/149‑1 (MQ=255) ccTTCACCCGCCTCGATGACAGCCGTACCCGTGCCTCGGGCGGGCACGGGTTGGGCTTGTCGATCGTACGGCGGATCATCTACTGGCACGCGGGCCGGGCCACAGTGGGCCGCAGCGAGGCGTTGGGCGGTGCCTGCTTCAGCCTg < 2:214301/146‑1 (MQ=255) ccTTCACCCGCCTCGATGACAGCCGTACCCGTGCCTCGGGCGGGCACGGGTTGGGCTTGTCGATCGTACGGCGGATCATCTACTGGCACGCGGGCCGGGCCACAGTGGGCCGCAGCGAGGCGTTGGGCGGTGCCTGCTTCAGCCTg > 1:214301/1‑146 (MQ=255) cACCCGCCTCGATGACAGCCGTACCCGTGCCTCGGGCGGGCACGGGTTGGGCTTGTCGATCGTACggcgggtgaagggcgtgaagatgcggtcccagaagccctcggggatccccgggccgtcatcctccacatcgatacggcaacgtt < 4:197329‑M2/149‑85 (MQ=255) ccGCCTCGATGACAGCCGTACCCGTGCCTCGGGCGGGCACGGGTTGGGCTTGTCGATCGTACGGCGGATCATCTACTGGCACGCGGGCCGGGCCACAGTGGGCCGCAGCGAGGCGTTGGGCGGTGCCTGCTTCAGCCTGAACTGGcc > 7:49994/1‑147 (MQ=255) gCCTCGATGACAGCCGTACCCGTGCCTCGGGCGGGCACGGGTTGGGCTTGTCGATCGTACGGCGGATCATCTACTGGCACGCGGGCCGGGCCACAGTGGGCCGCAGCGAGGCGTTGGGCGGTGCCTGCTTCAGCCTGAACTGGCCAAgg < 8:4591/149‑1 (MQ=255) cTCGATGACAGCCGTACCCGTGCCTCGGGCGGGCACGGGTTGGGCTTGTCGATCGTACGGCGGATCATCTACTGGCACGCGGGCCGGGCCACAGTGGGCCGCAGCGAGGCGTTGGGCGGTGCCTGCTTCAGCCTGAACTGGCCAAgg > 1:200519/1‑147 (MQ=255) | CTTGTCGGCAATGCCATGCGCCATGCCGAGGGCGAAGTGCGCCTGAGCTATCAGCTGGGCCAGCAACGTTGCCGTATCGATGTGGAGGATGACGGCCCGGGGATCCCCGAGGGCTTCTGGGACCGCATCTTCACGCCCTTCACCCGCCTCGATGACAGCCGTACCCGTGCCTCGGGCGGGCACGGGTTGGGCTTGTCGATCGTACGGCGGATCATCTACTGGCACGCGGGCCGGGCCACAGTGGGCCGCAGCGAGGCGTTGGGCGGTGCCTGCTTCAGCCTGAACTGGCCAAGG > NC_002947/1358116‑1358409 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |