New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3733332	66 (1.250)	4 (0.080)	4/248	NT	5.8%	coding (21/615 nt)	PP_3300	Transcriptional regulator, tetR family
	?	NC_002947	= 3733344	66 (1.280)					coding (33/615 nt)	PP_3300	Transcriptional regulator, tetR family

TGGCGCTCAACAGCAGAGCAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTTTCTGACTTAGCCAAATCGATTGGCTTTTCAAAGGCCTACATCTACAAAT  >  NC_002947/3733189‑3733480                                                                                                                                                |                                                                                                                                                     tGGCGCTCAACAGCAGAGCAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGcc                                                                                                                                                 >  1:220844/1‑149 (MQ=255)     gcTCAACAGCAGAGCAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGgct                                                                                                                                             >  4:279678/1‑148 (MQ=255)        cAACAGCAGAGCAATCGTTCGGTAGGGAAGCATGATGATTCCCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGgcgcgc                                                                                                                                          >  2:186805/1‑149 (MQ=255)         aaCAGCAGAGCAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCg                                                                                                                                         <  5:169336‑M2/149‑2 (MQ=255)         aaCAGCAGAGCAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCg                                                                                                                                         <  2:262482‑M2/149‑2 (MQ=255)          actgcagAGCAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCgg                                                                                                                                        <  1:64703/146‑1 (MQ=255)          aCAGCAGAGCAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCgcgcgccggcgagg                                                                                                                                        >  6:14312‑M1/1‑135 (MQ=255)           cagcagAGCAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCggg                                                                                                                                       >  1:122204‑M2/1‑146 (MQ=255)           cagcagAGCAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCggg                                                                                                                                       <  3:214123‑M2/149‑4 (MQ=255)              cagAGCAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGgcgcgc                                                                                                                                          <  4:51719/143‑1 (MQ=255)              cagAGCAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCAACCTCGCCGgcgcgc                                                                                                                                          >  3:51719/1‑143 (MQ=255)                   cAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGa                                                                                                                               >  3:238797/1‑149 (MQ=255)                      tCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCa                                                                                                                            >  3:259625/1‑149 (MQ=255)                           cGGTAGGGAAGCATGATGATTCCCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCacgac                                                                                                                        <  1:186805/148‑1 (MQ=255)                                 ggAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCGCGCGCCGGCGAgggtggagaagatttactcattttt                                                                                                                 >  5:14312‑M2/1‑124 (MQ=255)                                    aGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGgatc                                                                                                              <  4:259625/149‑1 (MQ=255)                                    aGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGgatc                                                                                                              <  3:187841/149‑1 (MQ=255)                                     gCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGgatca                                                                                                             <  1:262482/149‑1 (MQ=255)                                           ccgatctcatagACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCGCGCGCCGGCGAgggtggagaagatttactcatttttgaagcatcct                                                                                                       >  1:276481‑M2/5‑114 (MQ=255)                                                  cATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCt                                                                                                >  6:322094/1‑149 (MQ=255)                                                   aTAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCGCGCGCCGGCGAgggtggagaagatttactcatttttgaagcatcct                                                                                                       <  2:276481‑M2/141‑36 (MQ=255)                                                    tAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGc                                                                                              <  5:322094/149‑1 (MQ=255)                                                      gACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCa                                                                                            >  6:47879/1‑149 (MQ=255)                                                       aCCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCAt                                                                                           >  4:317610/1‑149 (MQ=255)                                                         cAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAACGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATg                                                                                          >  4:200988/1‑148 (MQ=255)                                                          aaGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGa                                                                                        <  5:282245/149‑1 (MQ=255)                                                          aaGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAACGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGa                                                                                        <  3:200988/149‑1 (MQ=255)                                                           agagGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAg                                                                                       <  4:214123/149‑1 (MQ=255)                                                               gaggTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACt                                                                                   >  3:104728/1‑149 (MQ=255)                                                                     tgACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATgg                                                                                         <  5:198388/137‑1 (MQ=255)                                                                     tgACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATgg                                                                                         >  6:198388/1‑137 (MQ=255)                                                                       aCCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCa                                                                            <  4:238797/148‑1 (MQ=255)                                                                       aCCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCa                                                                            <  1:136537/148‑1 (MQ=255)                                                                        ccaaaatataatATGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCAt                                                                           >  8:55040/7‑148 (MQ=255)                                                                          atattatattTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTAt                                                                        >  4:298267/1‑149 (MQ=255)                                                                          atattatattTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTAt                                                                        >  7:137315/1‑149 (MQ=255)                                                                           aaatataatATGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGTGATCAGATCATACAGGCTGCAATGGAGCACTTCGCCCATTATg                                                                       >  8:121760/4‑149 (MQ=255)                                                                                      ggTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACaa                                                             <  2:220844/148‑1 (MQ=255)                                                                                       gTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGa                                                           >  8:253359/1‑149 (MQ=255)                                                                                       gTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTAGCCGGCTCGCGGGCCAGCCGACAACGACGTGAGGGATAAGATCATCCAGGCTGCCATGGAGCACTTCGACCATTATGGGTAAGACaat                                                            >  8:248632/1‑147 (MQ=255)                                                                                          acacTCTTTCAATCATGTCCAGGATGCTTCAAAAATGAGTAAATCTTATCCACCCTCGCCGGCGCGCGGGCCAGCCGACCAATAAGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCa                                                        <  7:248632/149‑1 (MQ=255)                                                                                          acacTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCa                                                        <  7:253359/149‑1 (MQ=255)                                                                                            acTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACt                                                      <  3:298267/149‑1 (MQ=255)                                                                                              tctGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGTCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGt                                                    >  7:235443/1‑149 (MQ=255)                                                                                                  tCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTTTCt                                                >  1:339570/1‑149 (MQ=255)                                                                                                    aaTCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTTTCTg                                               >  4:84010/1‑148 (MQ=255)                                                                                                    aaTCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTTTCTg                                               >  7:65037/1‑148 (MQ=255)                                                                                                    aaTCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTTTCTGa                                              <  6:169336/149‑1 (MQ=255)                                                                                                    aaTCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTTTCTGa                                              >  8:116709/1‑149 (MQ=255)                                                                                                     aTCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTTTCTGAc                                             >  1:138344/1‑149 (MQ=255)                                                                                                         gTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTTTCTGACTTAg                                         <  7:55040/149‑1 (MQ=255)                                                                                                             cAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCAGGCGCGCGGGCCAGCAGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAATACCACTGTTTCTGACTTAGCCa                                      >  1:2969/1‑148 (MQ=255)                                                                                                              aGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCtcgccggcgcgcgggtggagaagatttactcatttttgaagcatcctggaactgattgacagagtgtgaccaaaatataatatggtcacacctcctcttggtctatgagatcgg                                    >  1:276481‑M1/1‑35 (MQ=255)                                                                                                              aGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCtcgccggcgcgcgggtggagaagatttactcatttttgaagcatcctggaactgattgacagagtgtgaccaaaatataatatggtcacacctcctcttggtctat                                            <  2:276481‑M1/141‑107 (MQ=255)                                                                                                                    cTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTTTCTGACTTAGCCAAATCGAtt                              <  8:137315/149‑1 (MQ=255)                                                                                                                    cTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTTTCTGACTTAGCCAAATCGAtt                              <  7:121760/149‑1 (MQ=255)                                                                                                                     ttCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATg                                                                                          >  4:337196/1‑88 (MQ=255)                                                                                                                     ttCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATg                                                                                          <  3:337196/88‑1 (MQ=255)                                                                                                                     ttCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTTTCTGACTTAGCCAAATCGATTg                             >  2:77746/1‑149 (MQ=255)                                                                                                                     ttCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTTTCTGACTTAGCCAAATCGATTg                             >  7:206357/1‑149 (MQ=255)                                                                                                                      tCAAAAATGAGTAAATCTTCTCGACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTTTCTGACTTAGCCAAATCGATTgg                            >  7:53264/1‑149 (MQ=255)                                                                                                                       cAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTTTCTGACTTAGCCAAATCGAtt                              <  7:116709/146‑1 (MQ=255)                                                                                                                       cAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTTTCTGACTTAGCCAAATCGATTg                             <  3:317610/147‑1 (MQ=255)                                                                                                                        aaaaaTGAGTAAATCTTCTCCACCCtcgccggcgcgcgggtggagaagatttactcatttttgaagcatcctggaactgattgacagagtgtgaccaaaatataatatggtcacacctcctcttggtctatgagaatcatcatgcttcc                          >  5:14312‑M1/1‑25 (MQ=255)                                                                                                                          aaaTGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTTTCTGACTTAGCCAAATCGATTGGCttt                        <  4:104728/149‑1 (MQ=255)                                                                                                                                gTAAATGTTCTCCACCCTCGGCGGCGCGCGGGCCAGCCGACGACGACGTGTGGGATCAGATCATCCAGGCTGCCATGGAGCACTTAGCCGATTATGGGTACGACAAGACCACTGTTTCTGACTTAGCCTAATCGATTGGCTTTTCaaa                   <  2:2969/148‑1 (MQ=255)                                                                                                                                 tAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTTTCTGACTTAGCCAAATCGAtt                              >  7:200532/1‑136 (MQ=255)                                                                                                                                 tAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTTTCTGACTTAGCCAAATCGAtt                              <  8:200532/136‑1 (MQ=255)                                                                                                                                 tAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTGTCTGACTTAGCCAAATCGATTGGCTGTTCAAAgg                 >  5:157266/1‑149 (MQ=255)                                                                                                                                   aaTCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTTTCTGACTTAGCCAAATCGATTGGCTTTTCAAAGGcc               <  2:339570/149‑1 (MQ=255)                                                                                                                                    aTCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTTTCTGAc                                             <  6:108999/118‑1 (MQ=255)                                                                                                                                    aTCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTTTCTGAc                                             >  5:108999/1‑118 (MQ=255)                                                                                                                                    aTCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTTTCTGACTTAGCCAAATCGATTGGCTTTTCAAAGTCCt              <  8:65037/149‑1 (MQ=255)                                                                                                                                     tcttctCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTTTCTGACTTAGCCAAATCGATTGGCTTTTCAAAGGCCTa             >  7:23767/1‑149 (MQ=255)                                                                                                                                      cttctCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTTTCTGACTTAGCCAAATCGATTGGCTTTTCAAAg                  >  1:299472/1‑143 (MQ=255)                                                                                                                                      cttctCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTTTCTGACTTAGCCAAATCGATTGGCTTTTCAAAg                  <  2:299472/143‑1 (MQ=255)                                                                                                                                         ctcCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTTTCTGACTTAGCCAAATCGATTGGCTTTTCAAAGGCCTACAt          <  8:23767/148‑1 (MQ=255)                                                                                                                                          tcCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGACCATTATGGGTACGAGAAGACCACTGTTTCTGACTTAGCCAAATCGATTGGCTTTTCAAAGGCGTACATc         >  3:190614/1‑148 (MQ=255)                                                                                                                                            cACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTTTCTGACTTAGCCAAATCGATTGGCTTTTCAAAGGCCTACATCTa       <  3:84010/148‑1 (MQ=255)                                                                                                                                              cccgcgcgccggcgagggtggagaagatttactcatttttgaagcatcctggaactgattgacagagtgtgaccaaaatataatatggtcacacctcctcttggtctatgagaatcatcatgcttccctaccgaacgattgctctgctg    >  1:122204‑M1/1‑3 (MQ=255)                                                                                                                                              cccgcgcgccggcgagggtggagaagatttactcatttttgaagcatcctggaactgattgacagagtgtgaccaaaatataatatggtcacacctcctcttggtctatgagaatcatcatgcttccctaccgaacgattgctctgctg    <  3:214123‑M1/149‑147 (MQ=255)                                                                                                                                               ccTCGCCGGCGCGCgggtggagaagatttactcatttttgaagcatcctggaactgattgacagagtgtgaccaaaatataatatggtcacacctcctcttggtctatgagaatcatcatgcttccctaccgaacgattgctctgctgt   >  6:14312‑M2/1‑14 (MQ=255)                                                                                                                                                cgcgcgccggcgagggtggagaagatttactcatttttgaagcatcctggaactgattgacagagtgtgaccaaaatataatatggtcacacctcctcttggtctatgagaatcatcatgcttccctaccgaacgattgctctgctgtt  <  2:262482‑M1/149‑149 (MQ=255)                                                                                                                                                cgcgcgccggcgagggtggagaagatttactcatttttgaagcatcctggaactgattgacagagtgtgaccaaaatataatatggtcacacctcctcttggtctatgagaatcatcatgcttccctaccgaacgattgctctgctgtt  <  5:169336‑M1/149‑149 (MQ=255)                                                                                                                                                cTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTTTCTGACTTAGCCAAATCGATTGGCTTTTCAAAGGCCTACATCTACAAAt  >  5:18176/1‑149 (MQ=255)                                                                                                                                                |                                                                                                                                                     TGGCGCTCAACAGCAGAGCAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTTTCTGACTTAGCCAAATCGATTGGCTTTTCAAAGGCCTACATCTACAAAT  >  NC_002947/3733189‑3733480

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.