New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3733332	66 (1.250)	4 (0.080)	4/248	NT	5.8%	coding (21/615 nt)	PP_3300	Transcriptional regulator, tetR family
	?	NC_002947	= 3733344	66 (1.280)					coding (33/615 nt)	PP_3300	Transcriptional regulator, tetR family

CAACAGCAGAGCAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTTTCTGACTTAGCCAAATCGATTGGCTTTTCAAAGGCCTACATCTACAAATTCTTCGAAT  >  NC_002947/3733196‑3733489                                                                                                                                                     |                                                                                                                                                  cAACAGCAGAGCAATCGTTCGGTAGGGAAGCATGATGATTCCCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGgcgcgc                                                                                                                                                   >  2:186805/1‑149 (MQ=255)  aaCAGCAGAGCAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCg                                                                                                                                                  <  5:169336‑M2/149‑2 (MQ=255)  aaCAGCAGAGCAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCg                                                                                                                                                  <  2:262482‑M2/149‑2 (MQ=255)   actgcagAGCAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCgg                                                                                                                                                 <  1:64703/146‑1 (MQ=255)    cagcagAGCAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCggg                                                                                                                                                >  1:122204‑M2/1‑146 (MQ=255)    cagcagAGCAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCggg                                                                                                                                                <  3:214123‑M2/149‑4 (MQ=255)       cagAGCAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGgcgcgc                                                                                                                                                   <  4:51719/143‑1 (MQ=255)       cagAGCAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCAACCTCGCCGgcgcgc                                                                                                                                                   >  3:51719/1‑143 (MQ=255)            cAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGa                                                                                                                                        >  3:238797/1‑149 (MQ=255)               tCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCa                                                                                                                                     >  3:259625/1‑149 (MQ=255)                    cGGTAGGGAAGCATGATGATTCCCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCacgac                                                                                                                                 <  1:186805/148‑1 (MQ=255)                          ggAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCGCGCGCCGGCGAgggtggagaagatttactcattttt                                                                                                                          >  5:14312‑M2/1‑124 (MQ=255)                             aGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGgatc                                                                                                                       <  4:259625/149‑1 (MQ=255)                             aGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGgatc                                                                                                                       <  3:187841/149‑1 (MQ=255)                              gCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGgatca                                                                                                                      <  1:262482/149‑1 (MQ=255)                                    ccgatctcatagACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCGCGCGCCGGCGAgggtggagaagatttactcatttttgaagcatcct                                                                                                                >  1:276481‑M2/5‑114 (MQ=255)                                           cATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCt                                                                                                         >  6:322094/1‑149 (MQ=255)                                            aTAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCGCGCGCCGGCGAgggtggagaagatttactcatttttgaagcatcct                                                                                                                <  2:276481‑M2/141‑36 (MQ=255)                                             tAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGc                                                                                                       <  5:322094/149‑1 (MQ=255)                                               gACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCa                                                                                                     >  6:47879/1‑149 (MQ=255)                                                aCCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCAt                                                                                                    >  4:317610/1‑149 (MQ=255)                                                  cAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAACGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATg                                                                                                   >  4:200988/1‑148 (MQ=255)                                                   aaGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGa                                                                                                 <  5:282245/149‑1 (MQ=255)                                                   aaGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAACGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGa                                                                                                 <  3:200988/149‑1 (MQ=255)                                                    agagGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAg                                                                                                <  4:214123/149‑1 (MQ=255)                                                        gaggTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACt                                                                                            >  3:104728/1‑149 (MQ=255)                                                              tgACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATgg                                                                                                  <  5:198388/137‑1 (MQ=255)                                                              tgACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATgg                                                                                                  >  6:198388/1‑137 (MQ=255)                                                                aCCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCa                                                                                     <  1:136537/148‑1 (MQ=255)                                                                aCCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCa                                                                                     <  4:238797/148‑1 (MQ=255)                                                                 ccaaaatataatATGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCAt                                                                                    >  8:55040/7‑148 (MQ=255)                                                                   atattatattTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTAt                                                                                 >  7:137315/1‑149 (MQ=255)                                                                   atattatattTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTAt                                                                                 >  4:298267/1‑149 (MQ=255)                                                                    aaatataatATGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGTGATCAGATCATACAGGCTGCAATGGAGCACTTCGCCCATTATg                                                                                >  8:121760/4‑149 (MQ=255)                                                                               ggTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACaa                                                                      <  2:220844/148‑1 (MQ=255)                                                                                gTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGa                                                                    >  8:253359/1‑149 (MQ=255)                                                                                gTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTAGCCGGCTCGCGGGCCAGCCGACAACGACGTGAGGGATAAGATCATCCAGGCTGCCATGGAGCACTTCGACCATTATGGGTAAGACaat                                                                     >  8:248632/1‑147 (MQ=255)                                                                                   acacTCTTTCAATCATGTCCAGGATGCTTCAAAAATGAGTAAATCTTATCCACCCTCGCCGGCGCGCGGGCCAGCCGACCAATAAGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCa                                                                 <  7:248632/149‑1 (MQ=255)                                                                                   acacTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCa                                                                 <  7:253359/149‑1 (MQ=255)                                                                                     acTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACt                                                               <  3:298267/149‑1 (MQ=255)                                                                                       tctGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGTCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGt                                                             >  7:235443/1‑149 (MQ=255)                                                                                           tCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTTTCt                                                         >  1:339570/1‑149 (MQ=255)                                                                                             aaTCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTTTCTg                                                        >  7:65037/1‑148 (MQ=255)                                                                                             aaTCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTTTCTg                                                        >  4:84010/1‑148 (MQ=255)                                                                                             aaTCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTTTCTGa                                                       >  8:116709/1‑149 (MQ=255)                                                                                             aaTCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTTTCTGa                                                       <  6:169336/149‑1 (MQ=255)                                                                                              aTCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTTTCTGAc                                                      >  1:138344/1‑149 (MQ=255)                                                                                                  gTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTTTCTGACTTAg                                                  <  7:55040/149‑1 (MQ=255)                                                                                                      cAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCAGGCGCGCGGGCCAGCAGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAATACCACTGTTTCTGACTTAGCCa                                               >  1:2969/1‑148 (MQ=255)                                                                                                             cTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTTTCTGACTTAGCCAAATCGAtt                                       <  8:137315/149‑1 (MQ=255)                                                                                                             cTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTTTCTGACTTAGCCAAATCGAtt                                       <  7:121760/149‑1 (MQ=255)                                                                                                              ttCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATg                                                                                                   <  3:337196/88‑1 (MQ=255)                                                                                                              ttCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATg                                                                                                   >  4:337196/1‑88 (MQ=255)                                                                                                              ttCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTTTCTGACTTAGCCAAATCGATTg                                      >  7:206357/1‑149 (MQ=255)                                                                                                              ttCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTTTCTGACTTAGCCAAATCGATTg                                      >  2:77746/1‑149 (MQ=255)                                                                                                               tCAAAAATGAGTAAATCTTCTCGACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTTTCTGACTTAGCCAAATCGATTgg                                     >  7:53264/1‑149 (MQ=255)                                                                                                                cAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTTTCTGACTTAGCCAAATCGAtt                                       <  7:116709/146‑1 (MQ=255)                                                                                                                cAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTTTCTGACTTAGCCAAATCGATTg                                      <  3:317610/147‑1 (MQ=255)                                                                                                                   aaaTGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTTTCTGACTTAGCCAAATCGATTGGCttt                                 <  4:104728/149‑1 (MQ=255)                                                                                                                         gTAAATGTTCTCCACCCTCGGCGGCGCGCGGGCCAGCCGACGACGACGTGTGGGATCAGATCATCCAGGCTGCCATGGAGCACTTAGCCGATTATGGGTACGACAAGACCACTGTTTCTGACTTAGCCTAATCGATTGGCTTTTCaaa                            <  2:2969/148‑1 (MQ=255)                                                                                                                          tAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTTTCTGACTTAGCCAAATCGAtt                                       <  8:200532/136‑1 (MQ=255)                                                                                                                          tAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTTTCTGACTTAGCCAAATCGAtt                                       >  7:200532/1‑136 (MQ=255)                                                                                                                          tAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTGTCTGACTTAGCCAAATCGATTGGCTGTTCAAAgg                          >  5:157266/1‑149 (MQ=255)                                                                                                                            aaTCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTTTCTGACTTAGCCAAATCGATTGGCTTTTCAAAGGcc                        <  2:339570/149‑1 (MQ=255)                                                                                                                             aTCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTTTCTGAc                                                      <  6:108999/118‑1 (MQ=255)                                                                                                                             aTCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTTTCTGAc                                                      >  5:108999/1‑118 (MQ=255)                                                                                                                             aTCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTTTCTGACTTAGCCAAATCGATTGGCTTTTCAAAGTCCt                       <  8:65037/149‑1 (MQ=255)                                                                                                                              tcttctCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTTTCTGACTTAGCCAAATCGATTGGCTTTTCAAAGGCCTa                      >  7:23767/1‑149 (MQ=255)                                                                                                                               cttctCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTTTCTGACTTAGCCAAATCGATTGGCTTTTCAAAg                           <  2:299472/143‑1 (MQ=255)                                                                                                                               cttctCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTTTCTGACTTAGCCAAATCGATTGGCTTTTCAAAg                           >  1:299472/1‑143 (MQ=255)                                                                                                                                  ctcCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTTTCTGACTTAGCCAAATCGATTGGCTTTTCAAAGGCCTACAt                   <  8:23767/148‑1 (MQ=255)                                                                                                                                   tcCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGACCATTATGGGTACGAGAAGACCACTGTTTCTGACTTAGCCAAATCGATTGGCTTTTCAAAGGCGTACATc                  >  3:190614/1‑148 (MQ=255)                                                                                                                                     cACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTTTCTGACTTAGCCAAATCGATTGGCTTTTCAAAGGCCTACATCTa                <  3:84010/148‑1 (MQ=255)                                                                                                                                        ccTCGCCGGCGCGCgggtggagaagatttactcatttttgaagcatcctggaactgattgacagagtgtgaccaaaatataatatggtcacacctcctcttggtctatgagaatcatcatgcttccctaccgaacgattgctctgctgt            >  6:14312‑M2/1‑14 (MQ=255)                                                                                                                                         cTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTTTCTGACTTAGCCAAATCGATTGGCTTTTCAAAGGCCTACATCTACAAAt           >  5:18176/1‑149 (MQ=255)                                                                                                                                            gaccgcgcccGGGCCAGCCGACCACTACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCACCCATTATCGGTACGACAAGACCACTGTTTATGACTTAGCCAAATCGATTGGCTTATCAAAGGCGTACATCTACAAAttc         >  6:301523/5‑148 (MQ=255)                                                                                                                                            gCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTTTCTGACTTAGCCAAATCGATTGGCTTTTCAAAGGCCTACATCTACAAAttct        <  8:206357/149‑1 (MQ=255)                                                                                                                                             ccGGCGCGCGGGTCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTTTCTGACTTAGCCAAATCGATTGGCTTTTCAAAGGCCTACATCTACAAAttctt       <  8:235443/149‑1 (MQ=255)                                                                                                                                                  gcgcgGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTTTCTGACTTAGCCAAATCGATTGGCTTTTCAAAGGCCTACATCTACAAATTCTTCGAAt  >  1:332011/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                  CAACAGCAGAGCAATCGTTCGGTAGGGAAGCATGATGATTCTCATAGACCAAGAGGAGGTGTGACCATATTATATTTTGGTCACACTCTGTCAATCAGTTCCAGGATGCTTCAAAAATGAGTAAATCTTCTCCACCCTCGCCGGCGCGCGGGCCAGCCGACCACGACGTGAGGGATCAGATCATCCAGGCTGCCATGGAGCACTTCGCCCATTATGGGTACGACAAGACCACTGTTTCTGACTTAGCCAAATCGATTGGCTTTTCAAAGGCCTACATCTACAAATTCTTCGAAT  >  NC_002947/3733196‑3733489

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.