New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4377989 =	56 (1.060)	3 (0.060)	3/242	NT	5.7%	coding (188/531 nt)	PP_5638	hypothetical protein
	?	NC_002947	4378032 =	46 (0.910)					coding (145/531 nt)	PP_5638	hypothetical protein

GGCGGTATCCGAGCCGGGGCAACTGATGGTGGCGGCGAGCTGGGTGGCATCACTCCGCAGCCGCAGACCAGCAGCATCGGCGTCAGCAGCGCCAGCATCAGCAATGGTTCTTTCGTCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGCCTGGCCGGCAACCGCACGCTCCACCGACCGGCCATGCTGGTAGGCGCCCCAGTAGGAC  >  NC_002947/4377841‑4378132                                                                                                                                                     |                                                                                                                                                  ggcgtgaatggctgggtcagggccgcagccttggtccttgtggtggcgtcctactggggcgcctaccagcatggccggtcggtggagcgtgcggttgccggccaggcgtcagcgcagcgagacagcggtgatcgcctagccgaggtaat                                                                                                                                                   >  5:205543‑M1/149‑149 (MQ=255) gcgtgaatggctgggtcagggccgcagccttggtccttgtggtggcgtcctactggggcgcctaccagcatggccggtcggtggagcgtgcggttgccggccagcgcgtcagcgcagcgagacagcggtgatcgcctagccgaggtaat                                                                                                                                                   >  1:73483‑M1/149‑149 (MQ=255)           gAGCCGTGTCAACTGATGGTGGCGGCGATCTGGGTGGCATAACTCCGCAGCCGCAGACCAGCAGCATCGGCGTAAGCAGCGCCAGCATCAGCAATGGTTCTTTCGTCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCg                                                                                                                                         <  8:223383/149‑1 (MQ=38)           gAGCCGGGGCAACTGATGGTGGCGGCGAGCTGGGTGGCATCACTCCGCAGCCGCAGACCAGCAGCATCGGCGTCAGCAGCGCCAGCATCAGCAATGGTTCTTTCGTCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCg                                                                                                                                         <  8:227335/149‑1 (MQ=255)            ctgggtcagggccgcagccttggtccttgtggtggcgtcctactggggcgcctaccagcatggccggtcggtggagcgtgcggttgccggccaggcgtcagcgcagcgagacagcggtgatcgcctagccgaggtaaTCGgcg                                                                                                                                              >  4:24789‑M1/138‑143 (MQ=255)            ctgggtcagggccgcagccttggtccttgtggtggcgtcctactggggcgcctaccagcatggccggtcggtggagcgtgcggttgccggccaggcgtcagcgcagcgagacagcggtgatcgcctagccgaggtaaTCGgcg                                                                                                                                              <  3:24789‑M1/6‑1 (MQ=255)              ccGGGGCAACTGATGGTGGCGGCGAGCTGGGTGGCATCACTCCGCAGCCGCAGACCAGCAGCATCGGCGTCAGCAGCGCCAGCATCAGCAATGGTTCTTTCGTCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTg                                                                                                                                      <  7:79298/149‑1 (MQ=255)                 gggCAACTGATGGTGGCGGCGAGCTGGGTGGCATCACTCCGCAGCCGCAGACCAGCAGCATCGGCGTCAGCAGCGCCAGCATCAGCAATGGTTCTTTCGTCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGttc                                                                                                                                   <  6:188063/149‑1 (MQ=255)                  ggCAACTGATGGTGGCGGCGAGCTGGGTGGCATCACTCCGCAGCCGCAGACCAGCAGCATCGGCGTCAGCAGCGCCAGCATCAGCAATGGTTCTTTCGTCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGttct                                                                                                                                  >  2:200040/1‑149 (MQ=255)                   gCAACTGATGGTGGCGGCGAGCTGGGTGGCATCACTCCGCAGCCGCAGACCAGCAGCATCGGCGTCAGCAGCGCCAGCATCAGCAATGGTTCTTTCGTCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGttc                                                                                                                                   >  4:70651/1‑147 (MQ=255)                   gCAACTGATGGTGGCGGCGAGCTGGGTGGCATCACTCCGCAGCCGCAGACCAGCAGCATCGGCGTCAGCAGCGCCAGCATCAGCAATGGTTCTTTCGTCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGttc                                                                                                                                   <  3:70651/147‑1 (MQ=255)                     aaCTGATGGTGGCGGCGAGCTGGGTGGCATCACTCCGCAGCCGCAGACCAGCAGCATCGGCGTCAGCAGCGCCAGCATCAGCAATGGTTCTTTCGTCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTcc                                                                                                                               <  4:279511/149‑1 (MQ=255)                        tGATGGTGGCGGCGAGCTGGGTGGCATCACTCCGCAGCCGCAGACCAGCAGCATCGGCGTCAGCAGCGCCAGCATCAGCAATGGTTCTTTCGTCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGa                                                                                                                            >  6:358019/1‑149 (MQ=255)                          aTGGTGGCGGCGAGCTGGGTGGCATCACTCCGCAGCCGCAGACCAGCAGCATCGGCGTCAGCAGCGCCAGCATCAGCAATGGTTCTTTCGTCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACg                                                                                                                          <  6:53957/149‑1 (MQ=255)                           tggtggCGGCGAGCTGGGTGGCATCACTCCGCAGCCGCAGACCAGCAGCATCGGCGTCAGCAGCGCCAGCATCAGCAATGGTTCTTTCGTCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACgg                                                                                                                         <  1:200040/149‑1 (MQ=255)                               ttggtccttgtggtggcgtcctactgggccgcctaccagcatggccggtcggtggagcgtgcggttgccggccaggcgtcagcgcagcgagacagcggtgatcgcctagccgaggtaaTCg                                                                                                                                                 <  3:189957‑M1/3‑1 (MQ=255)                               ttggtccttgtggtggcgtcctactgggccgcctaccagcatggccggtcggtggagcgtgcggttgccggccaggcgtcagcgcagcgagacagcggtgatcgcctagccgaggtaaTCg                                                                                                                                                 >  4:189957‑M1/119‑121 (MQ=255)                               ggcggcGAGCTGGGTGGCATCACTCCGCAGCCGCAGACCAGCAGCATCGGCGTCAGCAGCGCCAGCATCAGCAATGGTTCTTTCGTCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGcac                                                                                                                     >  1:80339/1‑149 (MQ=255)                                     cttgtggtggcgtcctactggggcgcctaccagcatggccggtcggtggagcgtgcggttgccggccaggcgtcagcgcagcgagacagcggtgatcgcctagccgaggtaaTCgg                                                                                                                                                >  1:291336‑M1/113‑116 (MQ=255)                                     cttgtggtggcgtcctactggggcgcctaccagcatggccggtcggtggagcgtgcggttgccggccaggcgtcagcgcagcgagacagcggtgatcgcctagccgaggtaaTCgg                                                                                                                                                <  2:291336‑M1/4‑1 (MQ=255)                                             tGGCATCACTCCGCAGCCGCAGACCAGCAGCATCGGCGTCAGCAGCGCCAGCATCAGCAATGGTTCTTTCGTCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGAtt                                                                                                     <  5:358019/149‑1 (MQ=255)                                               cgtcctactggggcgcctaccagcatggccggtcggtggagcgtgcggttgccggccaggcgtcagctcagcgagacagcggtgatcgcctagccgatgtaaTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTAc                                                                                                   >  5:207502‑M1/103‑149 (MQ=255)                                                 aTCACTCCGCAGCCGCAGACCAGCAGCATCGGCGTCAGCAGCGCCAGCATCAGCAATGGTTCTTTCGTCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCt                                                                                                 >  5:256379/1‑149 (MQ=255)                                                   cACTCCGCAGCCGCAGACCAGCAGCATCGGCGTCAGCAGCGCCAGCATCAGCAATGGTTCTTTCGTCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACggg                                                                                                                        >  6:181262/1‑126 (MQ=255)                                                   cACTCCGCAGCCGCAGACCAGCAGCATCGGCGTCAGCAGCGCCAGCATCAGCAATGGTTCTTTCGTCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACggg                                                                                                                        <  5:181262/126‑1 (MQ=255)                                                     cTCCGCAGCCGCAGACCAGCAGCATCGGCGTCAGCAGCGCCAGCATCAGCAATGGTTCTTTCGTCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGc                                                                                             <  5:295135/149‑1 (MQ=255)                                                      tCCGCTGCCGCAGACCAGCAGCATCGGCGTCAGCAGCGCCAGCATCAGCAATGGTTCTTTCGGCCTGTGCATGGGCCCTCGCCTCCTCCTCCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCt                                                                                                 <  7:108603/144‑1 (MQ=255)                                                      tCCGCAGCCGCAGACCAGCAGCATCCGCGTCAGCAGCGCCAGCATAAGCAATGGTTCTTTCGACCTGTGCATGGGCCCTCGCCTCCTCCTGCCCCAAGGCCCGTCGCTGATCGTCCTGACGGGCACCACGC‑‑TCGCAGATTACCt                                                                                                 >  8:108603/1‑144 (MQ=255)                                                               gcagACCAGCAGCATCGGCGTCAGCAGCGCCAGCATCAGCAATGGTTCTTTCGTCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCa                                                                                   <  6:256379/149‑1 (MQ=255)                                                                  gACCAGCAGCATCGGCGTCAGCAGCGCCAGCATCAGCAATGGTTCTTTCGTCCTGTGCATGAGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCg                                                                                >  2:296744/1‑149 (MQ=255)                                                                      agcagcATCGGCGTCAGCAGCGCCAGCATCAGCAATGGTTCTTTCGTCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGttcttc                                                                                                                                >  4:240249/1‑99 (MQ=255)                                                                      agcagcATCGGCGTCAGCAGCGCCAGCATCAGCAATGGTTCTTTCGTCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGttcttc                                                                                                                                <  3:240249/99‑1 (MQ=255)                                                                      agcagcATCGGCGTCAGCAGCGCCAGCATCAGCAATGGTTCTTTCGTCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCt                                                                                                 <  6:75557/128‑1 (MQ=255)                                                                      agcagcATCGGCGTCAGCAGCGCCAGCATCAGCAATGGTTCTTTCGTCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCt                                                                                                 >  5:75557/1‑128 (MQ=255)                                                                                  gTCAGCAGCGCCAGCATCAGCAATGGTTCTTTCGTCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTcgctgcgct                                                                 >  5:77462/1‑148 (MQ=255)                                                                                            ccAGCATCAGCAATGGTTCTTTCGTCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGCCTGGcc                                                      >  8:165752/1‑149 (MQ=255)                                                                                             cAGCATCAGCAATGGTTCTTTCGTCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGCCTGGCCg                                                     <  2:80339/149‑1 (MQ=255)                                                                                                  ccggccaggcgtcagcgcagcgagacagcggtgatcgcctagccgaggtaaTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGAtt                                                                                                     <  5:329860‑M1/45‑1 (MQ=255)                                                                                                  ccggccaggcgtcagcgcagcgagacagcggtgatcgcctagccgaggtaaTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGAtt                                                                                                     >  6:329860‑M1/52‑96 (MQ=255)                                                                                                       aaTGGTTCTTTCGTCCTGTGCATGAGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGCCTGGCCGGCAACCGCAc                                           <  1:296744/149‑1 (MQ=255)                                                                                                            ttCTTTCGTCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCg                                                                                >  3:187822/1‑107 (MQ=255)                                                                                                            ttCTTTCGTCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCg                                                                                <  4:187822/107‑1 (MQ=255)                                                                                                            ttCTTTCGTCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGCCTGGCCg                                                     >  6:259444/1‑134 (MQ=255)                                                                                                            ttCTTTCGTCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGCCTGGCCg                                                     <  5:259444/134‑1 (MQ=255)                                                                                                              cTTTCGTCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGCCTGGCCGGCAACCGCACGCTCCa                                     <  6:77462/148‑1 (MQ=255)                                                                                                              cTTTCGTCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGCCTGGCCGGCAACCGCACGCTCCa                                     <  7:165752/148‑1 (MQ=255)                                                                                                               tttCGTCCTGTGCATGGGCCCTCTCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGCCTGGCCGGCa                                                  <  6:140502/134‑1 (MQ=255)                                                                                                               tttCGTCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGCCTGGCCGGCa                                                  >  5:140502/1‑134 (MQ=255)                                                                                                                ttCGTCCTGTGCATGGGCCCTCGTCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGCCTGGCCGGCAACCGCACGCTCCacc                                   >  2:240562/1‑148 (MQ=255)                                                                                                                   gTCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGCCTGGCCGGCAACCGCACGCt                                        <  1:325834/140‑1 (MQ=255)                                                                                                                   gTCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGCCTGGCCGGCAACCGCACGCt                                        >  2:325834/1‑140 (MQ=255)                                                                                                                    tCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGTGAACACCGCTGTCTCGCTGCGCTGACGCCTGGCCGGCAACCGCACGCTCCaccgaccg                              >  3:232317/1‑149 (MQ=255)                                                                                                                    tCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGCCTGGccag                                                    >  1:184930/1‑125 (MQ=255)                                                                                                                    tCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGCCTGGccag                                                    <  2:184930/127‑3 (MQ=255)                                                                                                                           cATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGAtt                                                                                                     <  6:291981/71‑1 (MQ=255)                                                                                                                           cATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGAtt                                                                                                     >  5:291981/1‑71 (MQ=255)                                                                                                                            aTGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGCCTGGCCGGCAACCGCACGCTCCACCGACCGGCCATGCt                      >  5:158284/1‑149 (MQ=255)                                                                                                                             tGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTc                                                                                                <  4:303789/74‑1 (MQ=255)                                                                                                                             tGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTc                                                                                                >  3:303789/1‑74 (MQ=255)                                                                                                                              gggCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGCCTGGCCg                                                     >  6:265141/1‑116 (MQ=255)                                                                                                                              gggCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGCCTGGCCg                                                     <  5:265141/116‑1 (MQ=255)                                                                                                                              gggCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGCCTGGCCGGCAACCGCACGCTCCACCGACCGGCCATGCTgg                    >  2:238614/1‑149 (MQ=255)                                                                                                                                gCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGCGGTCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGCCTGGCCGGCAACCGCACGCTCCACCGACCGGCCATGCTgg                    >  1:96607/1‑149 (MQ=255)                                                                                                                                 cccTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGCCTGGCCGGCAACCGCACGCTCCACCGACCGGCCATGCTGGTAg                 <  2:167376/149‑1 (MQ=255)                                                                                                                                    tCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGCCTGGCCg                                                     >  4:50313/1‑110 (MQ=255)                                                                                                                                    tCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGCCTGGCCg                                                     <  3:50313/110‑1 (MQ=255)                                                                                                                                              ctGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGTGATCACCGCTGTCTCGCTGCGCTGACGCCTGGCCGGCAACCGCACGCTCGACCGACCGGCCATGCTGGTAGGCGCCCCAGTAgg    <  4:232317/149‑1 (MQ=255)                                                                                                                                                gcgcCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGCCTGGCCGGCAACCGCACGCTCCACCGACCGGCCATGCTGGTAGGCGCCCCAGTAGGAc  >  8:111143/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                  GGCGGTATCCGAGCCGGGGCAACTGATGGTGGCGGCGAGCTGGGTGGCATCACTCCGCAGCCGCAGACCAGCAGCATCGGCGTCAGCAGCGCCAGCATCAGCAATGGTTCTTTCGTCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGCCTGGCCGGCAACCGCACGCTCCACCGACCGGCCATGCTGGTAGGCGCCCCAGTAGGAC  >  NC_002947/4377841‑4378132

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.