New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4377989 =	56 (1.060)	3 (0.060)	3/242	NT	5.7%	coding (188/531 nt)	PP_5638	hypothetical protein
	?	NC_002947	4378032 =	46 (0.910)					coding (145/531 nt)	PP_5638	hypothetical protein

TGGCATCACTCCGCAGCCGCAGACCAGCAGCATCGGCGTCAGCAGCGCCAGCATCAGCAATGGTTCTTTCGTCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGC‑CTGGCCGGCAACCGCACGCTCCACCGACCGGCCATGCTGGTAGGCGCCCCAGTAGGACGCCACCACAAGGACCAAGGCTGCGGCCCTGACCCAGCCATTCACGCC  >  NC_002947/4377885‑4378179                                                                                                                                                      |                                                                                                                                                     tGGCATCACTCCGCAGCCGCAGACCAGCAGCATCGGCGTCAGCAGCGCCAGCATCAGCAATGGTTCTTTCGTCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGAtt                                                                                                                                                     <  5:358019/149‑1 (MQ=255)   cgtcctactggggcgcctaccagcatggccggtcggtggagcgtgcggttgccggccaggcgtcagctcagcgagacagcggtgatcgcctagccgatgtaaTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTAc                                                                                                                                                   >  5:207502‑M1/103‑149 (MQ=255)     aTCACTCCGCAGCCGCAGACCAGCAGCATCGGCGTCAGCAGCGCCAGCATCAGCAATGGTTCTTTCGTCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCt                                                                                                                                                 >  5:256379/1‑149 (MQ=255)         cTCCGCAGCCGCAGACCAGCAGCATCGGCGTCAGCAGCGCCAGCATCAGCAATGGTTCTTTCGTCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGc                                                                                                                                             <  5:295135/149‑1 (MQ=255)          tCCGCTGCCGCAGACCAGCAGCATCGGCGTCAGCAGCGCCAGCATCAGCAATGGTTCTTTCGGCCTGTGCATGGGCCCTCGCCTCCTCCTCCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCt                                                                                                                                                 <  7:108603/144‑1 (MQ=255)          tCCGCAGCCGCAGACCAGCAGCATCCGCGTCAGCAGCGCCAGCATAAGCAATGGTTCTTTCGACCTGTGCATGGGCCCTCGCCTCCTCCTGCCCCAAGGCCCGTCGCTGATCGTCCTGACGGGCACCACGC‑‑TCGCAGATTACCt                                                                                                                                                 >  8:108603/1‑144 (MQ=255)                   gcagACCAGCAGCATCGGCGTCAGCAGCGCCAGCATCAGCAATGGTTCTTTCGTCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCa                                                                                                                                   <  6:256379/149‑1 (MQ=255)                      gACCAGCAGCATCGGCGTCAGCAGCGCCAGCATCAGCAATGGTTCTTTCGTCCTGTGCATGAGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCg                                                                                                                                >  2:296744/1‑149 (MQ=255)                          agcagcATCGGCGTCAGCAGCGCCAGCATCAGCAATGGTTCTTTCGTCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCt                                                                                                                                                 >  5:75557/1‑128 (MQ=255)                          agcagcATCGGCGTCAGCAGCGCCAGCATCAGCAATGGTTCTTTCGTCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCt                                                                                                                                                 <  6:75557/128‑1 (MQ=255)                                      gTCAGCAGCGCCAGCATCAGCAATGGTTCTTTCGTCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTcgctgcgct                                                                                                                 >  5:77462/1‑148 (MQ=255)                                                ccAGCATCAGCAATGGTTCTTTCGTCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGC‑CTGGcc                                                                                                     >  8:165752/1‑149 (MQ=255)                                                 cAGCATCAGCAATGGTTCTTTCGTCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGC‑CTGGCCg                                                                                                    <  2:80339/149‑1 (MQ=255)                                                      ccggccaggcgtcagcgcagcgagacagcggtgatcgcctagccgaggtaaTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGAtt                                                                                                                                                     >  6:329860‑M1/52‑96 (MQ=255)                                                      ccggccaggcgtcagcgcagcgagacagcggtgatcgcctagccgaggtaaTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGAtt                                                                                                                                                     <  5:329860‑M1/45‑1 (MQ=255)                                                           aaTGGTTCTTTCGTCCTGTGCATGAGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGC‑CTGGCCGGCAACCGCAc                                                                                          <  1:296744/149‑1 (MQ=255)                                                                ttCTTTCGTCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCg                                                                                                                                >  3:187822/1‑107 (MQ=255)                                                                ttCTTTCGTCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCg                                                                                                                                <  4:187822/107‑1 (MQ=255)                                                                ttCTTTCGTCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGC‑CTGGCCg                                                                                                    <  5:259444/134‑1 (MQ=255)                                                                ttCTTTCGTCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGC‑CTGGCCg                                                                                                    >  6:259444/1‑134 (MQ=255)                                                                  cTTTCGTCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGC‑CTGGCCGGCAACCGCACGCTCCa                                                                                    <  6:77462/148‑1 (MQ=255)                                                                  cTTTCGTCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGC‑CTGGCCGGCAACCGCACGCTCCa                                                                                    <  7:165752/148‑1 (MQ=255)                                                                   tttCGTCCTGTGCATGGGCCCTCTCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGC‑CTGGCCGGCa                                                                                                 <  6:140502/134‑1 (MQ=255)                                                                   tttCGTCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGC‑CTGGCCGGCa                                                                                                 >  5:140502/1‑134 (MQ=255)                                                                    ttCGTCCTGTGCATGGGCCCTCGTCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGC‑CTGGCCGGCAACCGCACGCTCCacc                                                                                  >  2:240562/1‑148 (MQ=255)                                                                       gTCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGC‑CTGGCCGGCAACCGCACGCt                                                                                       >  2:325834/1‑140 (MQ=255)                                                                       gTCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGC‑CTGGCCGGCAACCGCACGCt                                                                                       <  1:325834/140‑1 (MQ=255)                                                                        tCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGTGAACACCGCTGTCTCGCTGCGCTGACGC‑CTGGCCGGCAACCGCACGCTCCaccgaccg                                                                             >  3:232317/1‑149 (MQ=255)                                                                        tCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGC‑CTGGccag                                                                                                   >  1:184930/1‑125 (MQ=255)                                                                        tCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGC‑CTGGccag                                                                                                   <  2:184930/127‑3 (MQ=255)                                                                               cATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGAtt                                                                                                                                                     <  6:291981/71‑1 (MQ=255)                                                                               cATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGAtt                                                                                                                                                     >  5:291981/1‑71 (MQ=255)                                                                                aTGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGC‑CTGGCCGGCAACCGCACGCTCCACCGACCGGCCATGCt                                                                     >  5:158284/1‑149 (MQ=255)                                                                                 tGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTc                                                                                                                                                <  4:303789/74‑1 (MQ=255)                                                                                 tGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTc                                                                                                                                                >  3:303789/1‑74 (MQ=255)                                                                                  gggCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGC‑CTGGCCg                                                                                                    >  6:265141/1‑116 (MQ=255)                                                                                  gggCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGC‑CTGGCCg                                                                                                    <  5:265141/116‑1 (MQ=255)                                                                                  gggCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGC‑CTGGCCGGCAACCGCACGCTCCACCGACCGGCCATGCTgg                                                                   >  2:238614/1‑149 (MQ=255)                                                                                    gCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGCGGTCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGC‑CTGGCCGGCAACCGCACGCTCCACCGACCGGCCATGCTgg                                                                   >  1:96607/1‑149 (MQ=255)                                                                                     cccTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGC‑CTGGCCGGCAACCGCACGCTCCACCGACCGGCCATGCTGGTAg                                                                <  2:167376/149‑1 (MQ=255)                                                                                        tCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGC‑CTGGCCg                                                                                                    >  4:50313/1‑110 (MQ=255)                                                                                        tCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGC‑CTGGCCg                                                                                                    <  3:50313/110‑1 (MQ=255)                                                                                                  ctGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGTGATCACCGCTGTCTCGCTGCGCTGACGC‑CTGGCCGGCAACCGCACGCTCGACCGACCGGCCATGCTGGTAGGCGCCCCAGTAgg                                                   <  4:232317/149‑1 (MQ=255)                                                                                                    gcgcCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGC‑CTGGCCGGCAACCGCACGCTCCACCGACCGGCCATGCTGGTAGGCGCCCCAGTAGGAc                                                 >  8:111143/1‑149 (MQ=255)                                                                                                       gtaatcggcgagcgtggtgcccgtcaggaagaacagcgacgcgccgaTTACATCGGCTAGGCGATCACCGCTGTCTCGCTGAGCTGACGC‑CTGGCCGGCAACCGCACGCTCCACCGACCGGCCATGCTGGTAGGCGCCCCAGTAGGACg                                                >  5:207502‑M2/48‑149 (MQ=255)                                                                                                         aatcggcgagcgtggtgcccgtcaggaagaacagcgacgcgccgaTTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGC‑CTGGCCgg                                                                                                   <  5:329860‑M2/51‑1 (MQ=255)                                                                                                         aatcggcgagcgtggtgcccgtcaggaagaacagcgacgcgccgaTTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGC‑CTGGCCgg                                                                                                   >  6:329860‑M2/46‑96 (MQ=255)                                                                                                                gTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGC‑CTGGCCGGCAACCGCACGCTCCACCGACCGGCCATGCTGGTAGGCGCCCCAGTAGGACGCCACCACAAgg                                     <  1:238614/149‑1 (MQ=255)                                                                                                                       ttcttcCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGC‑CTGGCCGGCAACCGCACGCTCCACCGACCGGCCATGCTGGTAGGCGCCCCAGTAGGACGCCACCACAAGGACCaa                                <  1:240562/147‑1 (MQ=255)                                                                                                                           tcCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGC‑CTGGCCGGCAACCGCACGCTCCACCGACCGGCCATGCTGGTAGGCGCCCCAGTAGGACGCCACCACAAGGACCAAGGCTGc                          >  5:73576/1‑149 (MQ=255)                                                                                                                            ccTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGC‑CTGGCCGGCAACCGCACGCTCCACCGACCGGCCATGCTGGTAGGCGCCCCAGTAGGACGCCACCACAAGGACCAAGGCTGCg                         >  2:256225/1‑149 (MQ=255)                                                                                                                             cTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGC‑CTGGCCGGCAACCGCACGCTCCACCGACCGGCCATGCTGGTAGGCGCCCCAGTAGGACGCCACCACAAGGACCAAGGCTGCgg                        <  7:111143/149‑1 (MQ=255)                                                                                                                             cTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGC‑CTGGCCGGCAACCGCACGCTCCACCGACCGGCCATGCTGGTAGGCGCCCCAGTAGGACGCCACCACAAGGACCAAGGCTGCgg                        <  2:96607/149‑1 (MQ=255)                                                                                                                                  gggCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGC‑CTGGCCGGCAACCGCACGCTCCACCGACCGGCCATGCTGGTAGGCGCCCCAGTAGGACGCCACCACAAGGACCAAGGCTGCGGCCCt                    >  5:158683/1‑148 (MQ=255)                                                                                                                                        cacGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGC‑CTGGCCGGCAACCGCACGCTCCACCGACCGGCCATGCTGGTAGGCGCCCCAGTAGGACGCCACCACAAGGACCAAGGCTGCGGCCCTGACCCAg             <  6:158284/149‑1 (MQ=255)                                                                                                                                         acGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGC‑CTGGCCGGCAACCGCACGCTCCACCGACCGGCCATGCTGGTAGGCGCCCCAGTAGGACGCCACCACAAGGACCAAGGCTGCgg                        >  3:26236/1‑137 (MQ=255)                                                                                                                                         acGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGC‑CTGGCCGGCAACCGCACGCTCCACCGACCGGCCATGCTGGTAGGCGCCCCAGTAGGACGCCACCACAAGGACCAAGGCTGCgg                        <  4:26236/137‑1 (MQ=255)                                                                                                                                          cGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGC‑CTGGCCGGCAACCGCACGCTCCACCGACCGGCCATGCTGGTAGGCGCCCCAGTAGGACGCCACCACAAGGACCAAGGCTGCGGCCCTGACCCAGc            >  3:4631/1‑148 (MQ=255)                                                                                                                                           gC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGC‑CTGGCCGGCAACCGCACGCTCCACCGACCGGCCATGCTGGTAGGCGCCCCAGTAgg                                                   >  3:202462/1‑108 (MQ=255)                                                                                                                                           gC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGC‑CTGGCCGGCAACCGCACGCTCCACCGACCGGCCATGCTGGTAGGCGCCCCAGTAgg                                                   <  4:202462/108‑1 (MQ=255)                                                                                                                                                cgccgaTTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGC‑CTGGCCGGCAACCGCACGCTCCACCGACCGGCCATGCTGGTAGGCGCCCCAGTAGGACGCCACCACAAGGACCAAGGCTGCGGCCCTGACCCAg             <  3:24789‑M2/137‑1 (MQ=255)                                                                                                                                                cgccgaTTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGC‑CTGGCCGGCAACCGCACGCTCCACCGACCGGCCATGCTGGTAGGCGCCCCAGTAGGACGCCACCACAAGGACCAAGGCTGCGGCCCTGACCCAg             >  4:24789‑M2/7‑143 (MQ=255)                                                                                                                                                  ccgaTTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGC‑CTGGCCGGCAACCGCACGCTCCACCGACCGGCCATGCTGGTAGGCGCCCCAGTAGGACGCCACCACAAg                                      <  2:291336‑M2/112‑1 (MQ=255)                                                                                                                                                  ccgaTTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGC‑CTGGCCGGCAACCGCACGCTCCACCGACCGGCCATGCTGGTAGGCGCCCCAGTAGGACGCCACCACAAg                                      >  1:291336‑M2/5‑116 (MQ=255)                                                                                                                                                   cgaTTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGC‑CTGGCCGGCAACCGCACGCTCCACCGACCGGCCATGCTGGTAGGCGGCCCAGTAGGACGCCACCACAAGGACCaa                                <  3:189957‑M2/118‑1 (MQ=255)                                                                                                                                                   cgaTTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGC‑CTGGCCGGCAACCGCACGCTCCACCGACCGGCCATGCTGGTAGGCGGCCCAGTAGGACGCCACCACAAGGACCaa                                >  4:189957‑M2/4‑121 (MQ=255)                                                                                                                                                     aTTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGCGCTGGCCGGCAACCGCACGCTCCACCGACCGGCCATGCTGGTAGGCGCCCCAGTAGGACGCCACCACAAGGACCAAGGCTGCGGCCCTGACCCAGCCATTCACGc   >  1:73483‑M2/2‑149 (MQ=255)                                                                                                                                                     aTTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGC‑CTGGCCGGCAACCGCACGCTCCACCGACCGGCCATGCTGGTAGGCGCCCCAGTAGGACGCCACCACAAGGACCAAGGCTGCGGCCCTGACCCAGCCATTCACGcc  >  5:205543‑M2/2‑149 (MQ=255)                                                                                                                                                      |                                                                                                                                                     TGGCATCACTCCGCAGCCGCAGACCAGCAGCATCGGCGTCAGCAGCGCCAGCATCAGCAATGGTTCTTTCGTCCTGTGCATGGGCCCTCGCCTCCTCCTGCGCCTCGGCGCGTCGCTGTTCTTCCTGACGGGCACCACGC‑‑TCGCCGATTACCTCGGCTAGGCGATCACCGCTGTCTCGCTGCGCTGACGC‑CTGGCCGGCAACCGCACGCTCCACCGACCGGCCATGCTGGTAGGCGCCCCAGTAGGACGCCACCACAAGGACCAAGGCTGCGGCCCTGACCCAGCCATTCACGCC  >  NC_002947/4377885‑4378179

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.