New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4766124 | 44 (0.830) | 4 (0.080) | 4/246 | NT | 8.1% | coding (777/2439 nt) | fpvA | TonB‑dependent outer membrane ferripyoverdine receptor FpvA |
? | NC_002947 | = 4766159 | 48 (0.940) | coding (812/2439 nt) | fpvA | TonB‑dependent outer membrane ferripyoverdine receptor FpvA |
CCTGATGTTCGATGGCCTGCCCACCACCTACAACGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCGAGATCGTGCGGGGCGCCACCGGCATGATGCAAGGTGCCGGCAACCCGTCGGCAGCCATCAACATGGTGCGCAAACGCCCTACCAAGGATTTCCAGGGCAGCGTCACCGGCTCGGCCGGCAGCTGGGACAATTACCGCGGCGAACTCGATCTCAGCGGCCCACTGAATGACAACGGCAGCG‑TCCGTGGCCGCTTCGTCGGCGCCTACAACGACAA > NC_002947/4765977‑4766270 | ccTGATGTTCGATGGCCTGCCCACCACCTACAACGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCGAGATCGTGCGGGGCGCCACCGGCATGATGCAAGGTGCCGGCAACCCGTCGGCAGCCATCAACATGGTgc > 1:106958/1‑149 (MQ=255) gTTCGATGGCCTGCCCACCACCTACAACGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCGAGATCGTGCGGGGCGCCACCGGCATGATGCAAGGTGCCGGCAACCCGTCGGCAGCCATCAACATGGTGCGCAAAc > 6:104955/1‑149 (MQ=255) cGATGGCCTGCCCACCACCTACAACGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCGAGATCGTGCGGGGCGCCACCGGCATGATGCAAGGTGCCGGCAACCCGTCGGCAGCCATCAACATGGTGCGCAAACGcc > 8:333896/1‑149 (MQ=255) gATGGCCTGCCCACCACCTACAACGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCGAGATCGTGCGGGGCGCCACCGGCATGATGCAAGGTGCCGGCAACCCGTCGGCAGCCATCAACATGGTGCGCAAACGccc > 7:95215/1‑149 (MQ=255) gATGGCCTGCCCACCACCTACAACGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCGAGATCGTGCGGGGCGCCACCGGCATGATGCAAGGTGCCGGCAACCCGTCGGCAGCCATCAACATGGTGCGCAAACGccc < 6:293638/149‑1 (MQ=255) gATGGCCTGCCCACCACCTACAACGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCGAGATCGTGCGGGGCGCCACCGGCATGATGCAAGGTGCCGGCAACCCGTCGGCAGCCATCAACATGGTG > 1:105954‑M1/1‑138 (MQ=255) gATGGCCTGCCCACCACCTACAACGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCGAGATCGTGCGGGGCGCCACCGGCATGATGCAAGGTGCCGGCAACCCGTCGGCAGCCATCAACATGGTG < 2:105954‑M1/138‑1 (MQ=255) cTGCCCACCACCTACAACGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCGAGATCGTGCGGGGCGCCACCGGCATGATGCAAGGTGCCGGCAACCCGTCGGCAGCCATCAACATGGTgc < 3:263148/133‑1 (MQ=255) cccACCACCTACAACGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCGAGATCGTGCGGGGCGCCACCGGCATGATGCAAGGTGCCGGCAACCCGTCGGCAGCCATCAACATGGTGCGCAAACGCCCTACCAAGGa < 8:274004/149‑1 (MQ=255) caccacCTACAACGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCGAGATCGTGCGGGGCGCCACCGGCATGATGCAAGGTGCCGGCAACCCGTCGGCAGCCATCAACATGGTGCGCAAACGCCCTACCAAGGAtt > 3:115400/1‑149 (MQ=255) ccaccTACAACGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCGAGATCGTGCGGGGCGCCACCGGCATGATGCAAGGTGCCGGCAACCCGTCGGCAGCCATCAACATGGTGCGCAAACGCCCTACCAAGGATTTc > 3:267526/1‑149 (MQ=255) cTACAACGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCGAGATCGTGCGGGGCGCCACCGGCATGATGCAAGGTGCCGGCAACCCGTCGGCAGCCATCAACATGGTGCGCAAACGCCCTACCAAGGATTTCCAgg < 5:104955/149‑1 (MQ=255) tACAACGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCGAGATCGTGCGGGGCGCCACCGGCATGATGCAAGGTGCCGGCAACCCGTCGGCAGCCATCAACATGGTGCGCAAACGCCCTACCAAGGATTTCCAggg > 3:66033/1‑149 (MQ=255) ggTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCGAGATCGTGCGGGGCGCCACCGGCATGATGCAAGGTGCCGGCAACCCGTCGGCAGCCATCAACATGGTGCGCAAACGCCCTACCAAGGATTTCCAGGGCAGCGTCACCGGCt > 2:307465/1‑149 (MQ=255) ccgcGGCCGACATGGCGCCCTACGACCGCGTCGAGATCGTGCGGGGCGCCACCGGCATGATGCAAGGTGCCGGCAACCCGTCGGCAGCCATCAACATGGTGacgctgccctggaaatccttggtagggcgtttgcgcaccatgttga > 4:287273‑M1/1‑101 (MQ=255) ccgcGGCCGACATGGCGCCCTACGACCGCGTCGAGATCGTGCGGGGCGCCACCGGCATGATGCAAGGTGCCGGCAACCCGTCGGCAGCCATCAACATGGTGacgctgccctggaaatccttggtagggcgtttgcgcaccatgttga < 3:287273‑M1/147‑47 (MQ=255) gcgcCCTACGACCGCGTCGAGATCGTGCGGGGCGCCACCGGCATGATGCAAGGTGCCGGCAACCCGTCGGCAGCCATCAACATGGTGCGCAAACGCCCTACCAAGGATTTCCAGGGCAGCGTCACCGGCTCGGCCGGCAGCTGGGACaa < 2:106958/149‑1 (MQ=255) cgcCCTACGACCGCGTCGAGATCGTGCGGGGCGCCACCGGCATGATGCAAGGTGCCGGCAACCCGTCGGCAGCCATCAACATGGTGCGCAAACGCCCTACCAAGGATTTCCAGGGCAGCGTCACCGGCTCGGCCGGCAGCTGGGACAAt > 5:131041/1‑149 (MQ=255) cgcgTCGAGATCGTGCGGGGCGCCACCGGCATGATGCAAGGTGCCGGCAACCCGTCGGCAGCCATCAACATGGTGCGCAAACGCCCTACCAAGGATTTCCAGGGCAGCGTCACCGGCTCGGCCGGCAGCTGGGACAATTACCgcggcg > 1:251429/1‑148 (MQ=255) gTCGAGATCGTGCGGGGCGCCACCGGCATGATGCAAGGTGCCGGCAACCCGTCGGCAGCCATCAACATGGTGCGCAAACGCCCTACCAAGGATTTCCAGGGCAGCGTCACCGGCTCGGCCGGCAg < 3:329586/125‑1 (MQ=255) gTCGAGATCGTGCGGGGCGCCACCGGCATGATGCAAGGTGCCGGCAACCCGTCGGCAGCCATCAACATGGTGCGCAAACGCCCTACCAAGGATTTCCAGGGCAGCGTCACCGGCTCGGCCGGCAg > 4:329586/1‑125 (MQ=255) gagaTCGTGCGGGGCGCCACCGGCATGATGCAAGGTGCCGGCAACCCGTCGGCAGCCATCAACATGGTGacgctgccctggaaatccttggtagggcgtttgcgcaccatgt < 2:330835‑M1/112‑44 (MQ=255) gagaTCGTGCGGGGCGCCACCGGCATGATGCAAGGTGCCGGCAACCCGTCGGCAGCCATCAACATGGTGacgctgccctggaaatccttggtagggcgtttgcgcaccatgt > 1:330835‑M1/1‑69 (MQ=255) gagaTCGTGCGGGGCGCCACCGGCATGATGCAAGGTGCCGGCAACCCGTCGGCAGCCATCAACATGGTGCGCAAACGCCCTACCAAGGATTTCCAGGGCAGCGTCACCGGCTCGGCCGGCAGCTGGGACAATTACCGCGGCGAACTCGa > 2:49217/1‑149 (MQ=255) agaTCGTGCGGGGCGCCACCGGCATGATGCAAGGTGCCGGCAACCCGTCGGCAGCCATCAACATGGTGCGCAAACGCCCTACCAAGGATTTCCAGGGCAGCGTCACCGGCTCGGCCGGCAGCTGGGACAATTACCGCGGCGAACTCGa > 6:142717/1‑148 (MQ=255) gaTCGTGCGGGGCGCCACCGGCATGATGCAAGGTGCCGGCAACCCGTCGGCAGCCATCAACATGGTGCGCAAACGCCCTACCAAGGATTTCCAGGGCAGCGTCACCGGCTCGGCCGGCAGCTGGGACAATTACCGCGGCGAACTCGAtc < 6:131041/149‑1 (MQ=255) gTGCGGGGCGCCACCGGCATGATGCAAGGTGCCGGCAACCCGTCGGCAGCCATCAACATGGTGCGCAAACGCCCTACCAAGGATTTCCAGGGCAGCGTCACCGGCTCGGCCGGCAGCTGGGACAATTACCGCGGCGAACTCGATCTCa < 2:251429/148‑1 (MQ=255) gTGCGGGGCGCCACCGGCATGATGCAAGGTGCCGGCAACCCGTCGGCAGCCATCAACATGGTGCGCAAACGCCCTACCAAGGATTTCCAGGGCAGCGTCACCGGCTCGGCCGGCAGCTGGGACAATTACCGCGGCGAACTCGATCTCa < 8:158348/148‑1 (MQ=255) tGCGGGGCGCCACCGGCATGATGCAAGGTGCCGGCAACCCGTCGGCAGCCATCAACATGGTGCGCAAACGCCCTACCAAGGATTTCCAGGGCAGCGTCACCGGCTCGGCCGGCAGCTGGGACAATTACCGCGGCGAACTCGATCTCAGc < 4:115400/149‑1 (MQ=255) gCGGGGCGCCACCGGCATGATGCAAGGTGCCGGCAACCCGTCGGCAGCCATCAACATGGTGCGCAAACGCCCTACCAAGGATTTCCAGGGCAGCGTCACCGGCTCGGCCGGCAGCTGGGACAATTACCGCGGCGAACTCGATCTCAGCg > 5:222258/1‑149 (MQ=255) gggCGCCACCGGCATGATGCAAGGTGCCGGCAACCCGTCGGCAGCCATCAACATGGTGCGCAAACGCCCTACCAAGGATTTCCAGGGCAGCGTCACCGGCTCGGCCGGCAGCTGGGACAATTACCGCGGCGAACTCGATCTCAGCGGcc < 8:95215/149‑1 (MQ=255) caacGGCATGATGCAAGGTGCCGGCAACCCGTCGGCAGCCATCAACATGGTGCGCAAACGCCCTACCAAGGATTTCCAGGGCAGCGTCACCGGCTCGGCCGGCAGCTGGGACAATTACCGCGGCGAACTCGATCTAAGCGGCCCACTGa < 5:214581/146‑1 (MQ=255) aCCGGCATGATGCAAGGTGCCGGCAACCCGTCGGCAGCCATCAACATGGTGCGCAAACGCCCTACCAAGGATTTCCAGGGCAGCGTCACCGGCTCGGCCGGCAGCTGGGACAATTACCGCGGCGAACTCGATCTCAGCGGCCCACTGaa > 2:26556/1‑149 (MQ=255) aCCGGCATGATGCAAGGTGCCGGCAACCCGTCGGCAGCCATCAACATGGTGCGCAAACGCCCTACCAAGGATTTCCAGGGCAGCGTCACCGGCTCGGCCGGCAGCTGGGACAATTACCGCGGCGAACTCGATCTCAGCGGCCCACTGaa < 7:333896/149‑1 (MQ=255) aCCGGCATGATGCAAGGTGCCGGCAACCCGTCGGCAGCCATCAACATGGTGCGCAAACGCCCTACCAAGGATTTCCAGGGCAGCGTCACCGGCTCGGCCGGCAGCTGGGACAATTAACGCGGCGAACTCGATCTCAGCGGCCCACTGaa > 7:110784/1‑149 (MQ=255) tgatgCAAGGTGCCGGCAACCCGTCGGCAGCCATCAACATGGTGCGCAAACGCCCTACCAAGGATTTCCAGGGCAGCGTCACCGGCTCGGCCGGCAGCTGGGACAATTACCGCGGCGAACTCGATCTCAGCGGCCCACTGAATGACAAc < 5:142717/149‑1 (MQ=255) atgCAAGGTGCCGGCAACCCGTCGGCAGCCATCAACATGGTGCGCAAACGCCCTACCAAGGATTTCCAGGGCAGCGTCACCGGCTCGGCCGGCAGCTGGGACAATTACCGCTGCGAACTCGATCTCAGCGGCCCACTGAATGACAACgg < 8:110784/149‑1 (MQ=255) atgCAAGGTGCCGGCAACCCGTCGGCAGCCATCAACATGGTGCGCAAACGCCCTACCAAGGATTTCCAGGGCAGCGTCACCGGCTCGGCCGGCAGCTGGGACAATTACCGCGGCGAACTCGATCTCAGCGGCCCACTGAATGACAACg < 4:66033/148‑1 (MQ=255) aaGGTGCCGGCAACCCGTCGGCAGCCATCAACATGGTGCGCAAACGCCCTACCAAGGATTTCCAGGGCAGCGTCACCGGCTCGGCCGGCAGCTGGGACAATTACCGCGGCGAACTCGATCTCAGCGGCCCACTGAATGACAACGGCAGc < 1:307465/149‑1 (MQ=255) aaGGTGCCGGCAACCCGTCGGCAGCCATCAACATGGTGCGCAAACGCCCTACCAAGGATTTCCAGGGCAGCGTCACCGGCTCGGCCGGCAGCTGGGACAATTACCGCGGCGAACTCGATCTCAGCGGCCCACTGAATGACAACGGCAGc < 1:49217/149‑1 (MQ=255) gTGCCGGCAACCCGTCGGCAGCCATCAACATGGTGCGCAAACGCCCTACCAAGGATTTCCAGGGCAGCGTCACCGGCTCGGCCGGCAGCTGGGACAATTACCGCGGCGAACTCGATCTCAGCGGCCCACTGAAt < 2:188945/134‑1 (MQ=255) gTGCCGGCAACCCGTCGGCAGCCATCAACATGGTGCGCAAACGCCCTACCAAGGATTTCCAGGGCAGCGTCACCGGCTCGGCCGGCAGCTGGGACAATTACCGCGGCGAACTCGATCTCAGCGGCCCACTGAAt > 1:188945/1‑134 (MQ=255) aCCCGTCGGCAGCCATCAACATGGTGCGCAAACGCCCTACCAAGGATTTCCAGGGCAGCGTCACCGGCTCGGCCGGCAGCTGGGACAATTACCGCGGCGAACTCGATCTCAGCGGCCCACTGAATGACAACGGCAGCG‑TCCGTGGCCGc < 4:267526/149‑1 (MQ=255) ccGTCGGCAGCCATCAACATGGTGCGCAAACGCCCTACCAAGGATTTCCAGGGCAGCGTCACCGGCTCGGCCGGCAGCTGGGACAATTACCGCGGCGAACTCGATCTCAGCGGCCCACTGAATGACAACGGCAGCG‑TCCGTGGCCGCtt > 6:115754/1‑149 (MQ=255) ggCAGCCATCAACATGGTGCGCAAACGCCCTACCAAGGATTTCCAGGGCAGCGTCACCGGCTCGGCCGGCAGCTGGGACAATTACCGCGGCGAACTCGATCTCAGCGGCCCACTGAATGACAACGGCAGCG‑TCCGTGGCCGCTtcgtcg < 6:222258/149‑1 (MQ=255) cAGCCATCAACATGGTGCGCAAACGCCCTACCAAGGATTTCCAGGGCAGCGTCACCGGCTCGGCCGGCAGCTGGGACAATTACCGCGGCGAACTCGATCTCAGCGGCCCACTGAATGACAACGGCAGCG‑TCCGTGGCCGCTTCGTCGgc > 3:32069/1‑149 (MQ=255) ccATCAACATGGTGCGCAAACGCCCTACCAAGGATTTCCAGGGCAGCGTCACCGGCTCGGCCGGCAGCTGGGACAATTACCGCGACGAACTCGATCTCAGCGGCCCACTGAATGACAACGGCAGCG‑TCCGTGGCCGCTTCGTCGgc > 3:68830/1‑146 (MQ=255) ccATCAACATGGTGCGCAAACGCCCTACCAAGGATTTCCAGGGCAGCGTCACCGGCTCGGCCGGCAGCTGGGACAATTACCGCGACGAACTCGATCTCAGCGGCCCACTGAATGACAACGGCAGCG‑TCCGTGGCCGCTTCGTCGgc < 4:68830/146‑1 (MQ=255) aTCAACATGGTGCGCAAACGCCCTACCAAGGATTTCCAGGGCAGCGTCACCGGCTCGGCCGGCAGCTGGGACAATTACCGCGGCGAACTCGATCTCAGCGGCCCACTGAATGACAACGGCAGCG‑TCCGTGGCCGCTTCGTCGGCGCCTa > 5:357685/1‑149 (MQ=255) tCAACATGGTGCGCAAACGCCCTACCAAGGATTTCCAGGGCAGCGTcaccatgttgatggctgccgacgggttgccggcaccttgcatcatgccggtggcgccccgcacgatctcgacgcggtcgtagggcgccatgtcggccgcgg > 4:287273‑M2/1‑46 (MQ=255) tCAACATGGTGCGCAAACGCCCTACCAAGGATTTCCAGGGCAGCGTcaccatgttgatggctgccgacgggttgccggcaccttgcatcatgccggtggcgccccgcacgatctcgacgcggtcgtagggcgccatgtcggccgcgg < 3:287273‑M2/147‑102 (MQ=255) tCAACATGGTGCGCAAACGCCCTACAAAGGATTTCCAGGGCAGCGTCACCGGCTCGGCCGGCAGCTGGGACAATTACCGCGGCGAACTCGATCTCAGCGGCCCACTGAATGACAACGGCAGCG‑TCCGTGGCCGCTTCGTCGGCGCCTa > 6:266419/1‑148 (MQ=255) aCATGGTGCGCAAACGCCCTACCAAGGATTTCCAGGGCAGCGTcaccatgttgatggctgccgacgggttgccggcaccttgcatcatgccggtggcgccccgcacgatctc > 1:330835‑M2/1‑43 (MQ=255) aCATGGTGCGCAAACGCCCTACCAAGGATTTCCAGGGCAGCGTcaccatgttgatggctgccgacgggttgccggcaccttgcatcatgccggtggcgccccgcacgatctc < 2:330835‑M2/112‑70 (MQ=255) aCATGGTGCGCAAACGCCCTACCAAGGATTTCCAGGGCAGCGTCACCGGCTCGGCCGGCAGCTGGGACAATTACCGCGGCGAACTCGATCTCAGCGGCCCACTGAATGACAACGGCAGCG‑TCCGTGGCCGCTTCGTCGGCGCCTACAAc < 6:357685/149‑1 (MQ=255) cATGGTGCGCAAACGCCCTACCAAGGATTTCCAGGGCAGCGTCACCGGCTCGGCCGGCAGCTGGGACAATTACCGCGGCGAACTCGATCTCAGCGGCCCACTGAATGACAACGGCAGCGCTCCGTGGCCGCTTCGTCGGCGCCTACAAc < 1:26556/149‑1 (MQ=255) tGGTGCGCAAACGCCCTACCAAGGATTTCCAGGGCAGCGTCACCGGCTCGGCCGGCAGCTGGGACAATTACCGCGGCGAACTCGATCTCAGCGGCCCACTGAATGACAACGGCAGCG‑TCCGTGGCCGCTTCGTCGGCGCCTACAACGAc < 4:32069/149‑1 (MQ=255) ggTGCGCAAACGCCCTACCAAGGATTTCCAGGGCAGCGTCACCGGCTCGGCCGGCAGCTGGGACAATTACCGCGGCGAACTCGATCTCAGCGGCCCACTGAATGACAACGGCAGCG‑TCCGTGGCCGCTTCGTCGGCGCCTACAACGAc > 6:327895/1‑148 (MQ=255) gTGCGCAAACGCCCTACCAAGGATTTCCAGGGCAGCGTCACCGGCTCGGCCGGCAGCTGGGACAATTACCGCGGCGAACTCGATCTCAGCGGCCCACTGAATGACAACGGCAGCG‑TCCGTGGCCGCTTCGTCGGCGCCTACAACGACaa < 5:327895/149‑1 (MQ=255) | CCTGATGTTCGATGGCCTGCCCACCACCTACAACGCCGACTGGGTCGCCGCGGCCGACATGGCGCCCTACGACCGCGTCGAGATCGTGCGGGGCGCCACCGGCATGATGCAAGGTGCCGGCAACCCGTCGGCAGCCATCAACATGGTGCGCAAACGCCCTACCAAGGATTTCCAGGGCAGCGTCACCGGCTCGGCCGGCAGCTGGGACAATTACCGCGGCGAACTCGATCTCAGCGGCCCACTGAATGACAACGGCAGCG‑TCCGTGGCCGCTTCGTCGGCGCCTACAACGACAA > NC_002947/4765977‑4766270 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |