New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4925742 =	52 (0.980)	4 (0.080)	4/244	NT	7.0%	coding (284/858 nt)	PP_4335	flagellar motor protein
	?	NC_002947	4925811 =	57 (1.120)					coding (215/858 nt)	PP_4335	flagellar motor protein

ACCACTGCCAAACAGCAGCGAAGAGTTGAGCTCGATCTCGATCCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGCATCGC‑‑GCACGTCATCGCTGATGGTTTTCAACGGGTCGACATTGGTCGCCGCCAGGCCCGCTTCGGTCTGC‑TCGCTGTCTTTGACCAGCGGTTCGGCCGGGCGCACGCTGAGCGGCTGCTCATCGCCAATCGGGATCGGCTTCATGCTGCGCTCGGGGTCGTTGAATACCCCTAGCAAAGCCTGGGAAATAACCTT  >  NC_002947/4925597‑4925890                                                                                                                                                    |                                                                                                                                                      accacTGCCAAACAGCAGCGAAGAGTTGAGCTCGATCTCGATCCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGCATCGC‑‑GCACGTCATCGCTGATGGTTTTCAACGGGTCGACATTGGTcgccg                                                                                                                                                    >  3:236977/1‑149 (MQ=255)   cacTGCCAAACAGCAGCGAAGAGTTGAGCTCGATCTCGATCCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGCATCGC‑‑GCACGTCATCGCTGATGGTTTTCAACGGGTCGACATTGGTcgccgc                                                                                                                                                   >  1:105702/1‑148 (MQ=255)          aaaCAGCAGCGAAGAGTTGAGCTCGATCTCGATCCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGCATCGC‑‑GCACGTCATCGCTGATGGTTTTCAACGGGTCGACATTGGTCGCCGCCAGGCCCg                                                                                                                                           >  5:68061/1‑149 (MQ=255)              agcagcGAAGAGTTGAGCTCGATCTCGATCCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGCATCGC‑‑GCACGTCATCGCTGATGGTTTTCAACGGGTCGACATTGGTCGCCGCCAGGCCCGCTTc                                                                                                                                       >  3:105065/1‑149 (MQ=255)                cagcGAAGAGTTGAGCTCGATCTCGATCCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGCATCGC‑‑GCACGTCATCGCTGATGGTTTTCAACGGGTCGACATTGGTCGCCGCCAGGCCCGCTTCgg                                                                                                                                     <  6:68061/149‑1 (MQ=255)                 agcGAAGAGTTGAGCTCGATCTCGATCCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGTATCGC‑‑GCACGTCATCGCTGATGGTTTTCAACGGGTCGACATTGGTCGCCGCCAGGCCCGCTTCGGt                                                                                                                                    <  6:133925/149‑1 (MQ=255)                        agTTGAGCTCGATCTCGATCCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGCATCGCTGGCACGTCATCGCTGATGGTTTTCAACGGGTCGACATTGGTCGCCGCCAGGCCCGCTTCGGTCTGC‑t                                                                                                                              <  1:104550/149‑1 (MQ=255)                        agTTGAGCTCGATCTCGATCCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGCATCGC‑‑GCACGTCATCGCTGATGGTTTTCAACGGGTCGACATTGGTCGCCGCCAGGCCCGCTTCGGTCTGC‑TCg                                                                                                                            <  4:105065/149‑1 (MQ=255)                              gCTCGATCTCGATCCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGCATCGC‑‑GCACGTCATCGCTGATGGTTTTCAACGGGTCGACATTGGTCGCCGCCAGGCCCGCTTCGGTc                                                                                                                                   >  8:186738/1‑137 (MQ=255)                              gCTCGATCTCGATCCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGCATCGC‑‑GCACGTCATCGCTGATGGTTTTCAACGGGTCGACATTGGTCGCCGCCAGGCCCGCTTCGGTc                                                                                                                                   <  7:186738/137‑1 (MQ=255)                              gCTCGATCTCGATCCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGCATCGC‑‑GCACGTCATCGCTGATGGTTTTCAACGGGTCGACATTGGTCGCCGCCAGGCCCGCTTCGGTCTGC‑TCGCTGTCt                                                                                                                      >  2:314042/1‑149 (MQ=255)                                  gatctcgatcCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGCATCGC‑‑GCACGTCATCGCTGATGGTTTTCAACGGGTCGACATTGGTCGCCGCCAGGCCCGCTTCGGTCTGC‑TCGCTGTCttt                                                                                                                    <  7:112621/147‑1 (MQ=255)                                  gatctcgatcCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGCATCGC‑‑GCACGTCATCGCTGATGGTTTTCAACGGGTCGACATTGGTCGCCGCCAGGCCCGCTTCGGTCTGC‑TCGCTGTCTTTGa                                                                                                                  <  4:236977/149‑1 (MQ=255)                                        gatcCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGCATCGC‑‑GCACGTCATCGCTGATGGTTTTCAACGGGTCGACATTGGTCGCCGCCAGGCCCGCTTCGGTCTGC‑TCGCTGTCTTTGAc                                                                                                                 <  1:314042/144‑1 (MQ=255)                                            cacaGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGCATCGC‑‑GCACGTCATCGCTGATGGTTTTCAACGGGTCGACATTGGTCGCCGCCAGGCCCGCTTCGGTCTGC‑TCGCTGTCTTTGACCa                                                                                                               >  1:255857/1‑142 (MQ=255)                                            cacaGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGCATCGC‑‑GCACGTCATCGCTGATGGTTTTCAACGGGTCGACATTGGTCGCCGCCAGGCCCGCTTCGGTCTGC‑TCGCTGTCTTTGACCa                                                                                                               <  2:255857/142‑1 (MQ=255)                                             acaGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGCATCGC‑‑GCACGTCATCGCTGATGGTTTTCAACGGGTCGACATTGGTCGCCGCCAGGCCCGCTTCGGTCTGC‑TCGCTGTCtt                                                                                                                     <  4:113302/135‑1 (MQ=255)                                             acaGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGCATCGC‑‑GCACGTCATCGCTGATGGTTTTCAACGGGTCGACATTGGTCGCCGCCAGGCCCGCTTCGGTCTGC‑TCGCTGTCtt                                                                                                                     >  3:113302/1‑135 (MQ=255)                                             acaGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGCATCGC‑‑GCACGTCATCGCTGATGGTTTTCAACGGGTCGACATTGGTCGCCGCCAGGCCCGCTTCGGTCTGC‑TCGCTGTCTTTGa                                                                                                                  <  1:192129/138‑1 (MQ=255)                                             acaGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGCATCGC‑‑GCACGTCATCGCTGATGGTTTTCAACGGGTCGACATTGGTCGCCGCCAGGCCCGCTTCGGTCTGC‑TCGCTGTCTTTGa                                                                                                                  >  2:192129/1‑138 (MQ=255)                                               tcgatcaacgagggtaagtacaaggttatttcccaggctttgctaggggtattcaacgaccccgagcgcagcatgaagccgatcccgattggcgatgagcaGCCGCCAGGCCCGCTTCGGTCTGC‑TCGCTGTCTTTGACCAGCGGTTCg                                                                                                       <  2:168279‑M1/48‑1 (MQ=255)                                               aGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGCATCGC‑‑GCACGTCATCGCTGATGGGTTTCAACGGGTCGACATTGGTCGCCGCCAGGCCCGCTTCGGTCTGC‑TCGCTGTCTTTGACCAGCGGTTCGGc                                                                                                     >  7:141398/1‑149 (MQ=255)                                                        ccGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGCATCGC‑‑GCACGTCATCGCTGATGGTTTTCAACGGGTCGACATTGGTCGCCGCCAGGCCCGCTTCGGTCTGC‑TCGCTGTCTTTGACCAGCGGTTCGGCCGGGCGCAc                                                                                            <  2:105702/149‑1 (MQ=255)                                                          gcgcACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGCATCGC‑‑GCACGTCATCGCTGATGGTTTTAAACGGGTCGACATTGGTCGCCGCCAGGCCCGCTTCGGTCTCC‑TCGCTCTCTTTTACAACCGGTTCGGCCGGGCGCACGc                                                                                          >  1:210055/1‑149 (MQ=255)                                                            gcACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGCATCGC‑‑GCACGTCATCGCTGATGGTTTTCAACGGGTCGACATTGGTCGCCGCCAGGCCCGCTTCGGTCTGC‑TCGCTGTCTTTGACCAGCGGTTCGGCCGGGCGCACGCt                                                                                         >  6:180376/1‑148 (MQ=255)                                                                   caaggttatttcccaggctttgctaggggtattcaacgaccccgagcgcagcatgaagccgatcccgattggcgatgagcaGCCGCCAGGCCCGCTTCGGTCTGC‑TCGCTGTCTTTGACCAGCGGTTCGGCCGGGCGCACGCTGAGCgg                                                                                   >  1:168279‑M1/82‑149 (MQ=255)                                                                        ggTCGCTGTTGATCAGGTCGCCGAAGGCATCGC‑‑GCACGTCATCGCTGATGGTTTTCAACGGGTCGACATTGGTCGCCGCCAGGCCCGCTTCg                                                                                                                                      >  4:516/1‑92 (MQ=255)                                                                        ggTCGCTGTTGATCAGGTCGCCGAAGGCATCGC‑‑GCACGTCATCGCTGATGGTTTTCAACGGGTCGACATTGGTCGCCGCCAGGCCCGCTTCg                                                                                                                                      <  3:516/92‑1 (MQ=255)                                                                        ggTCGCTGTTGATCAGGTCGCCGAAGGCATCGC‑‑GCACGTCATCGCTGATGGTTTTCAACGGGTCGACATTGGTCGCCGCCAGGCCCGCTTCGGTCTGC‑TCGCTGTCTTTGACCAGCGGTTCGGCCGGGCGCACGCTGAGCGGCTGCTCa                                                                            >  7:87635/1‑149 (MQ=255)                                                                         gTCGCTGTTGATCAGGTCGCCGAAGGCATCGC‑‑GCACGTCATCGCTGATGGTTTTCAACGGGTCGACATTGGTCGCCGCCAGGCCCGCTTCGGTCTGC‑TCGCTGTCt                                                                                                                      <  6:317455/106‑1 (MQ=255)                                                                                   aTCAGGTCGCCGAAGGCATCGC‑‑GCACGTCATCGCTGATGGTTTTCAACGGGTCGACATTGGTCGCCGCCAGGCCCGCTTCGGTCTGC‑TCGCTGTCTTTGACCAGCGGTTCGGCCGGGCGCACGCTGAGCGGCTGCTCATCGCCAATCgg                                                                 >  3:294785/1‑149 (MQ=255)                                                                                        gTCGCCGAAGGCATCGC‑‑GCACGTCATCGCTGATGGTTTTCAACGGGTCGACATTGGTCGCCGCCAGGCCCGCTTCGGTCTGC‑TCGCTGTCTTTGACCAGCGGTTCGGCCGGGCGCACGCTGAGCGGCTGCTCATCGCCAATCGGGATCg                                                            >  3:327103/1‑149 (MQ=255)                                                                                          taggggtattcaacgaccccgagcgcagcatgaagccgatcccgattggcgatgagcaGCCGCCAGGCCCGCTTCGGTCTGC‑TCGCTGTCTTTGACCAGCGGTTCGGCCGGGCGCACGCTGAGCGGCTGCTCAt                                                                           <  3:53993‑M1/76‑1 (MQ=255)                                                                                          taggggtattcaacgaccccgagcgcagcatgaagccgatcccgattggcgatgagcaGCCGCCAGGCCCGCTTCGGTCTGC‑TCGCTGTCTTTGACCAGCGGTTCGGCCGGGCGCACGCTGAGCGGCTGCTCAt                                                                           >  4:53993‑M1/59‑134 (MQ=255)                                                                                          cGCCGAAGGCATCGC‑‑GCACGTCATCGCTGATGGTTTTCAACGGGTCGACATTGGTCGCCGCCAGGCCCGCtt                                                                                                                                        >  3:90018/1‑72 (MQ=255)                                                                                          cGCCGAAGGCATCGC‑‑GCACGTCATCGCTGATGGTTTTCAACGGGTCGACATTGGTCGCCGCCAGGCCCGCtt                                                                                                                                        <  4:90018/72‑1 (MQ=255)                                                                                          cGCCGAAGGCATCGC‑‑GCACGTCATCGCTGATGGTTTTCAACGGGTCGACATTGGTCGCCGCCAGGCCCGCTTCGGTCTGC‑TCGCTGTCTTTGACCAGCGGTTCGGCCGGGCGCACGCTGAGCGgctg                                                                                <  1:334562/127‑1 (MQ=255)                                                                                          cGCCGAAGGCATCGC‑‑GCACGTCATCGCTGATGGTTTTCAACGGGTCGACATTGGTCGCCGCCAGGCCCGCTTCGGTCTGC‑TCGCTGTCTTTGACCAGCGGTTCGGCCGGGCGCACGCTGAGCGgctg                                                                                >  2:334562/1‑127 (MQ=255)                                                                                            ccGAAGGCATCGC‑‑GCACGTCATCGCTGATGGTTTTCAACGGGTCTACATTGGTCGCCGCCAGGCCCGCTTCGGTCTGC‑TCGCTGTCTTTGACCAGCGGTTCGGCCGGGCGCACGATGAGCGGCTGCTCATCGCCAATCTGGATAGGCt                                                         >  3:28822/1‑148 (MQ=255)                                                                                                 ggCATCGC‑‑GCACGTCATCGCTGATGGTTTTCAACGGGTCGACATTGGTCGCCGCCAGGCCCGCTTCGGTCTGC‑TCGCTGTCTTTGACCAGCGGTTCGGCCGGGCGCACGCTGAGCGGCTGCTCATCGCCAATCGGGATCGGCTTCAtgc                                                   <  4:340648/149‑1 (MQ=255)                                                                                                   cATCGC‑‑GCACGTCATCGCTGATGGTTTTCAACGGGTCGACATTGGTCGCCGCCAGGCCCGCTTCGGTCTGC‑TCGCTGTCTTTGACCAGCGGTTCGGCCGGGCGCACGCTGAGCGGCTGCTCATCGCCAATCGGGATCGGCTTCAtgctg                                                 <  8:87635/149‑1 (MQ=255)                                                                                                             aCGTCATCGCTGATGGTTTTCAACGGGTCGACATTGGTCGCCGCCAGGCCCGCTTCGGTCTGC‑TCGCTGTCTTTGACCAGCGGTTCGGCCGGGCGCACGCTGAGCGGCTGCTCATCGCCAATCGGGATCGGCTTCATGCTGCGCTCggg                                         <  8:141398/149‑1 (MQ=255)                                                                                                                 cATCGCTGATGGTTTTCAACGGGTCGACATTGGTCGCCGCCAGGCCCGCTTCGGTCTGC‑TCGCTGTCTTTGACCAGCGGTTCGGCCGGGCGCATGCTGAGCAGCCGCTCagcat                                                                        <  1:143722/114‑5 (MQ=255)                                                                                                                 cATCGCTGATGGTTTTCAACGGGTCGACATTGGTCGCCGCCAGGCCCGCTTCGGTCTGC‑TCGCTGTCTTTGACCAGCGGTTCGGCCGGGCGCATGCTGAGCAGCCGCTCagcat                                                                        >  2:143722/1‑110 (MQ=255)                                                                                                                 cATCGCTGATGGTTTTCAACGGGTCGACATTGGTCGCCGCCAGGCCCGCTTCGGTCTGC‑TCGCTGTCTTTGACCAGCGGTTCGGCCGGGCGCACGCTGAGCGGCTGCTCATCGCCAATCGGGATCGGCTTCATGCTGCGCTCGGGGTCg                                     >  6:60045/1‑149 (MQ=255)                                                                                                                   tCGCTGATTGTTTTCATCTGGTCGTCATTGGGCGCCGCCAGGCCCGCTTCGGTCTGC‑TCGCTGTCTTTGACCAGCGGTTCGGCCGGGCGCACGCTGAGCGGCTGCTCATCGCCAATCGGGATCGGCTTCATGCTGCGCTCGTGGTCGtt                                   <  2:210055/149‑1 (MQ=255)                                                                                                                   tCGCTGATGGTTTTCAACGGGTCGACATTGGTCGCCGCCAGGCCCGCTTCGGTCTGC‑TCGCTGTCTTTGACCAGCGGTTCGGCCGGGCGCACGCTGAGCGGCTGCTCATCGCCAATCGGGATCGGCTTCATGCTGCGCTCGGGGTCGtt                                   >  5:209860/1‑149 (MQ=255)                                                                                                                       tGATGGTTTTCAACGGGTCGACATTGGTCGCCGCCAGGCCCGCTTCGGTCTGC‑TCGCTGTCTTTGACCAGCGGTTCGGCCgg                                                                                                  <  8:151498/82‑1 (MQ=255)                                                                                                                       tGATGGTTTTCAACGGGTCGACATTGGTCGCCGCCAGGCCCGCTTCGGTCTGC‑TCGCTGTCTTTGACCAGCGGTTCGGCCgg                                                                                                  >  7:151498/1‑82 (MQ=255)                                                                                                                            gTTTTCAACGGGTCGACATTGGTCGCCGCCAGGCCCGCTTCGGTCTGC‑TCGCTGTCTTTGACCAGCGGTTCGGCCGGGCGCACGCTGAGCGGCTGCTCATCGCCAATCGGGATCGGCTTCATGCTGCGCTCGGGGTCGTTGAATAccc                           <  4:327103/148‑1 (MQ=255)                                                                                                                                 cAACGGGTCGACATTGGTCGCCGCCAGGCCCGCTTCGGTCTGC‑TCGCTGTCTTTGACCAGCGGTTCGGCCGGGCGCACGCTGAGCGGCTGCTCATCGCCAATCGGGATCGGc                                                          >  6:195470/1‑112 (MQ=255)                                                                                                                                 cAACGGGTCGACATTGGTCGCCGCCAGGCCCGCTTCGGTCTGC‑TCGCTGTCTTTGACCAGCGGTTCGGCCGGGCGCACGCTGAGCGGCTGCTCATCGCCAATCGGGATCGGc                                                          <  5:195470/112‑1 (MQ=255)                                                                                                                                     gggTCGACATTGGTCGCCGCCAGGCCCGCTTCGGTCTGC‑TCGCTGTCTTTGACCAGCGGTTCGGCCGGGCGCACGCTGAGCGGCTGCTCATCGCCAATCGGGATCGGCTTCATGCTGCGCTCGGGGTCGTTGAATACCCCTAGCAAAGc                 <  5:60045/149‑1 (MQ=255)                                                                                                                                        tCGACATTGGTCGCCGCCAGGCCCGCTTCGGTCTGC‑TCGCTGTCTTTGACCAGCGGTTCGGCCGGGCGCACGCTGAGCGGCTGCTCATCGCCAATCGGGATCGGCTTCATGCTGCGCTCGGGGTCGTTGAATACCCCTAGCAAAGCCTg              >  3:166756/1‑149 (MQ=255)                                                                                                                                          gACATTGGTCGCCGCCAGGCCCGCTTCGGTCTGC‑TCGCTGTCTTTGACCAGCGGTTCGGCCGGGCGCACGCTGAGCGGCTGCTCATCGCCAATCGGGATCGGCTTCATGCTGCGCTCGGGGTCGTTGAATAccc                           <  7:270039/134‑1 (MQ=255)                                                                                                                                          gACATTGGTCGCCGCCAGGCCCGCTTCGGTCTGC‑TCGCTGTCTTTGACCAGCGGTTCGGCCGGGCGCACGCTGAGCGGCTGCTCATCGCCAATCGGGATCGGCTTCATGCTGCGCTCGGGGTCGTTGAATAccc                           >  8:270039/1‑134 (MQ=255)                                                                                                                                            cATTGGTCGCCGCCAGGCCCGCTTCGGTCTGC‑TCGCTGTCTTTGACCAGCGGTTCGGCCGGGCGCACGCTGAGCGGCTGCTCATCGCCAATCGGGATCGGCTTCATGCTGCGCTCGGGGTCGTTGAATACCCCTAGCAAAGCCTgg             <  6:35999/146‑1 (MQ=255)                                                                                                                                            cATTGGTCGCCGCCAGGCCCGCTTCGGTCTGC‑TCGCTGTCTTTGACCAGCGGTTCGGCCGGGCGCACGCTGAGCGGCTGCTCATCGCCAATCGGGATCGGCTTCATGCTGCGCTCGGGGTCGTTGAATACCCCTAGCAAAGCCTgg             >  5:35999/1‑146 (MQ=255)                                                                                                                                                ggTCGCCGCCAGGCCCGCTTCGGTCTGCGTCGCTGTCTTTGACCAGCGGTTCGGCCGGGCGCACGCTGAGCGGCTGCTCATCGCCAATCGGGATCGGCTTCATGCTGCGCTCGGGGTCGTTGAATACCCCTAGCAAAGCCTGGGAAAt        >  1:196915/1‑148 (MQ=255)                                                                                                                                                ggTCGCCGCCAGGCCCGCTTCGGTCTGC‑TCGCTGTCTTTGACCAGCGGTTCGGCCGGGCGCACGCTGAGCGGCTGCTCATCGCCAATCGGGATCGGCTTCATGCTGCGCTCGGGGTCGTTGAATACCCCTAGCAAAGCCTGGGAAATa       <  4:294785/148‑1 (MQ=255)                                                                                                                                                  tCGCCGCCAGGCCCGCTTCGGTCTGC‑TCGCTGTCTTTGACCAGCGGTTCGGCCGGGCGCACGCTGAGCGGCTGCTCATCGCCAATCGGGATCGGCTTCATGCTGCGCTCGGGGTCGtt                                   >  2:206848/1‑118 (MQ=255)                                                                                                                                                  tCGCCGCCAGGCCCGCTTCGGTCTGC‑TCGCTGTCTTTGACCAGCGGTTCGGCCGGGCGCACGCTGAGCGGCTGCTCATCGCCAATCGGGATCGGCTTCATGCTGCGCTCGGGGTCGtt                                   <  1:206848/118‑1 (MQ=255)                                                                                                                                                  tCGCCGCCAGGCCCGCTTCGGTCTGC‑TCGCTGTCATTGACCAGCGGTTCGGCCGGGCGCACGCTGAGCGGCTGCTCATCGCCAATCGGGATCGGCTTCATCCTGCGCTCGGGGTCGTTGAATACCACTAGCAAATCCTGGGAAATAAca    >  8:56870/1‑148 (MQ=255)                                                                                                                                                    GCCGCCAGGCCCGCTTCGGTCTGC‑TCGCTGTCTTTGACCAGCGGTTCGGCCGGGCGCACGCTGAGCGGCTGCTCATCGCCAATCGGGATCGGCTTCATGCTGCGCTCGGGGTCGTTGAATACCCCTAGCAAAGCCTGGGAAATAACCtt  >  4:166756‑M1/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                      ACCACTGCCAAACAGCAGCGAAGAGTTGAGCTCGATCTCGATCCACAGCTCGTTGCCGCGCACGGTCATCTGGTCGCTGTTGATCAGGTCGCCGAAGGCATCGC‑‑GCACGTCATCGCTGATGGTTTTCAACGGGTCGACATTGGTCGCCGCCAGGCCCGCTTCGGTCTGC‑TCGCTGTCTTTGACCAGCGGTTCGGCCGGGCGCACGCTGAGCGGCTGCTCATCGCCAATCGGGATCGGCTTCATGCTGCGCTCGGGGTCGTTGAATACCCCTAGCAAAGCCTGGGAAATAACCTT  >  NC_002947/4925597‑4925890

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.