New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5177969 =	41 (0.780)	6 (0.120)	5/244	NT	13.6%	coding (16/1221 nt)	PP_4553	ECF family RNA polymerase sigma‑70 factor
	?	NC_002947	5178009 =	37 (0.730)					coding (479/486 nt)	PP_4554	hypothetical protein

GGGTTGGCGGGGATACCGTCGCGTTGCCAGCGTTCGACGGCAATGAAGAAGGCATCATGCATGGCCTCCTCGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAG‑‑TATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCCACCAGGCGGTCCAGGCTTTCTCCCCAGCCCTGGTGGAAGCCCATTTCTTCATGGGCCCGGCAGTCGGTGGCATTC  >  NC_002947/5177824‑5178107                                                                                                                                                    |                                                                                                                                           tgacgaggaacagggcaaaacccgctacaccgcccgtgcctggcactggaatgccaccgactgccgggcccatgaagaaatgggcttccaccagggctggggagaaagcctggaccgcctggtggaggtggtgacccagcggatgccc                                                                                                                                            >  7:153604‑M1/148‑148 (MQ=255) gggTTGGCGGGGCTCCCGTCGCGTTGACAGCGTTCGACGTCAATGAAGAAGGCATCATTCATGGCCTCCTCGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCGAG‑‑TATGCGCCGCGACTCCTGCCGGTACACAGCCTCGAc                                                                                                                                         <  8:150702/149‑1 (MQ=255)   acgaggaacagggcaaaacccgctacacctcccgtgcctggcactggaatgccaccgactgccgggcccatgaagaaatgggcttccaccagggctggggagaaagcctggaccgcctggtggaggtggtgacccagcggatgccCGAc                                                                                                                                         >  5:86807‑M1/146‑149 (MQ=255)    ttGGCGGGGATACCGTCGCGTTGCCAGCGTTCGACGGCAATGAAGAAGGCATCATGCATGGCCTCCTCGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAG‑‑TATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTc                                                                                                                                      <  4:136119/149‑1 (MQ=255)       gCGGGGATACCGTCGCGTTGCCAGCGTTCGACGGCAATGAAGAAGGCATCATGCATGGCCTCCTCGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAG‑‑TATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGgc                                                                                                                                   <  8:174331/149‑1 (MQ=255)              ggcaaaacccgctacaccgcccgtgcctggcactggaatgccaccgactgccgggcccatgaagaaatgggcttccaccagggctggggagaaagcctggaccgcctggtggaggtggtgacccagcggatgccCGACTTCGgcacgca                                                                                                                              <  6:80423‑M1/15‑1 (MQ=255)                 cGTCGCGTTGCCAGCGTTCGACGGCAATGAAGAAGGCATCATGCATGGCCTCCTCGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAG‑‑TATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTgg                                                                                                                         <  7:8612/149‑1 (MQ=255)                           ccAGCGTTCGACGGCAATGAAGAAGGCATCATGCATGGCCTCCTCGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAG‑‑TATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCgg                                                                                                               <  4:204685/149‑1 (MQ=255)                             aGCGTTCGACGGCAATGAAGAAGGCATCATGCATGGCCTCCTCGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAG‑‑TATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGc                                                                                                              >  3:163275/1‑148 (MQ=255)                                 ttCGACGGCAATGAAGAAGGCATCATGCATGGCCTCCTCGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAG‑‑TATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGgcacgcac                                                                                                                             <  5:352016/129‑1 (MQ=255)                                 ttCGACGGCAATGAAGAAGGCATCATGCATGGCCTCCTCGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAG‑‑TATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGgcacgcac                                                                                                                             >  6:352016/1‑129 (MQ=255)                                    gACGGCAATGAAGAAGGCATCATGCATGGCCTCCTCGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAGCCGATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAg                                                                                                        <  1:282304/149‑1 (MQ=255)                                      cGGCAATGAAGAAGGCATCATGCATGGCCTCCTCGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAG‑‑TATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCgg                                                                                                    <  7:79680/149‑1 (MQ=255)                                       ggCAATGAAGAAGGCATCATGCATGGCCTCCTCGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAG‑‑TATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCggg                                                                                                   >  5:294697/1‑149 (MQ=255)                                        ctggcactggaatgccaccgactgccgggcccatgaagaaatgggcttccaccagggctggggagaaagcctggaccgcctggtggaggtggtgacccagcggatgccCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCgg                                                                                                    >  5:80423‑M1/109‑149 (MQ=255)                                          aaTGAAGAAGGCATCATGCATGGCCTCCTCGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAG‑‑TATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCAt                                                                                                >  6:173044/1‑149 (MQ=255)                                          aaTGAAGAAGGCATCATGCATGGCCTCCTCGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAG‑‑TATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCAt                                                                                                >  1:272954/1‑149 (MQ=255)                                            tGAAGAAGGCATCATGCATGGTCTCCTCGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAG‑‑TATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATcc                                                                                              >  3:148204/1‑149 (MQ=255)                                             gaagaaGGCATCATGCATGGCCTCCTCGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAG‑‑TATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGc                                                                                                                       <  3:130263/123‑1 (MQ=255)                                             gaagaaGGCATCATGCATGGCCTCCTCGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAG‑‑TATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGc                                                                                                                       >  4:130263/1‑123 (MQ=255)                                              aagaagGCATCATGCATGGCCTCCTCGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAG‑‑TATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGc                                                                                            >  3:343809/1‑149 (MQ=255)                                                 aagGCATCATGCATGGCCTCCTCGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAG‑‑TATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTgg                                                                                         <  5:173044/149‑1 (MQ=255)                                                  agGCATCATGCATGGCCTCCTCGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAG‑‑TATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTggg                                                                                        >  4:292620/1‑149 (MQ=255)                                                   ggCATCATGCATGGCCTCCTCGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAG‑‑TATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATc                                                                                               >  8:276995/1‑141 (MQ=255)                                                   ggCATCATGCATGGCCTCCTCGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAG‑‑TATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATc                                                                                               <  7:276995/141‑1 (MQ=255)                                                    gCATCATGCATGGCCTCCTCGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAG‑‑TATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTgg                                                                                         <  6:84493/146‑1 (MQ=255)                                                    gCATCATGCATGGCCTCCTCGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAG‑‑TATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTgg                                                                                         >  5:84493/1‑146 (MQ=255)                                                            cATGGCCTCCTCGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAG‑‑TATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCATGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTC                                                                              >  2:60096‑M1/1‑149 (MQ=255)                                                             aTGGCCTCCTCGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAG‑‑TATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCC                                                                             >  3:17208‑M1/1‑149 (MQ=255)                                                             aTGGCCTCCTCGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAG‑‑TATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCC                                                                             >  3:266905‑M1/1‑149 (MQ=255)                                                              tGGCCTCCTCGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAG‑‑TATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCCA                                                                            <  3:292620‑M1/149‑1 (MQ=255)                                                                gCCTCCTCGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAG‑‑TATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCCACC                                                                          <  6:294697‑M1/149‑1 (MQ=255)                                                                gCCTCCTCGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAG‑‑TATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCCAC                                                                           >  5:42451‑M1/1‑148 (MQ=255)                                                                 cctcctCGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAG‑‑TATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTgg                                                                                         <  7:63190/133‑1 (MQ=255)                                                                 cctcctCGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAG‑‑TATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTgg                                                                                         >  8:63190/1‑133 (MQ=255)                                                                     ctcGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAG‑‑TATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCCACCAGGCg                                                                     >  2:17675/1‑149 (MQ=255)                                                                     ctcGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAG‑‑TATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCCACCAGGCg                                                                     <  4:17208/149‑1 (MQ=255)                                                                       cGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAG‑‑TATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCCACCAAGCGGt                                                                   >  2:316153/1‑149 (MQ=255)                                                                          ccAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAG‑‑TATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCCACCAGGCGGTCCa                                                                <  2:272954/149‑1 (MQ=255)                                                                          ccAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAG‑‑TATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCCACCAAGCGGTCCa                                                                <  1:316153/149‑1 (MQ=255)                                                                                    aTCACCCAGCAAGCGGATCAGTGTCGCCAG‑‑TATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCCACCAGGCGGTCCAGGCTTTCTcc                                                      <  4:148204/149‑1 (MQ=255)                                                                                        ccaccagggctgaggagaaagcctggaccgcctggtggaggtggtgacccagcggatgccCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCgg                                                                                                    >  4:294853‑M1/61‑101 (MQ=255)                                                                                        ccaccagggctgaggagaaagcctggaccgcctggtggaggtggtgacccagcggatgccCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCgg                                                                                                    <  3:294853‑M1/41‑1 (MQ=255)                                                                                           aGCAAGCGGATCAGTGTCGCCAG‑‑TATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCAt                                                                                                           >  2:166619/1‑89 (MQ=255)                                                                                            gCAAGCGGATCAGTGTCGCCAG‑‑TATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCCACCAGGCGGTCCAGGCTTTCTCCCCa                                                   <  4:87396/144‑1 (MQ=255)                                                                                            gCAAGCGGATCAGTGTCGCCAG‑‑TATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCCACCAGGCGGTCCAGGCTTTCTCCCCAgagat                                              >  3:87396/1‑145 (MQ=255)                                                                                                  ggATCAGTGTCGCCAG‑‑TATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCCACCAGGgctggggagaaagcctggaccgcctggtgga                                        <  4:343809‑M1/149‑32 (MQ=255)                                                                                                   gATCAGTGTCGCCAG‑‑TATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCCACCAGGCGGTCCAGGCTTTCTCCCCAGCCCTGGTGGaa                                       <  4:266905/149‑1 (MQ=255)                                                                                                     tCAGTGTCGCCAG‑‑TATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTcacca                                                                                  <  2:298519/104‑1 (MQ=255)                                                                                                     tCAGTGTCGCCAG‑‑TATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTcacca                                                                                  >  1:298519/1‑104 (MQ=255)                                                                                                         aaagcctggaccgcctggtggaggtggtgacccagcggatgccCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCa                                                                                                 >  7:267555‑M1/44‑87 (MQ=255)                                                                                                         aaagcctggaccgcctggtggaggtggtgacccagcggatgccCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCa                                                                                                 <  8:267555‑M1/44‑1 (MQ=255)                                                                                                               cAG‑‑TATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCCACCAGGCGGTCCAGGCTTTCTCCCCAGCcctg                                             >  6:253794‑M2/1‑127 (MQ=255)                                                                                                               cAG‑‑TATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCCACCAGGCGGTCCAGGCTTTCTCCCCAGCcctg                                             <  5:253794‑M2/131‑5 (MQ=255)                                                                                                                         gccgcGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCCACCAGGCGGTCCAGGCTTTCTCCCCAGCCCTGGTGGAAGCCCATttc                              <  4:100822/138‑1 (MQ=255)                                                                                                                         gccgcGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCCACCAGGCGGTCCAGGCTTTCTCCCCAGCCCTGGTGGAAGCCCATttc                              >  3:100822/1‑138 (MQ=255)                                                                                                                             cgACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCCACCAGGCGGTCCAGGCTTTCTCCCCAGCCCTGGTGGAAGCCCATTTCTTCATGGGCCCGGCa               <  2:73736/149‑1 (MQ=255)                                                                                                                                 tCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCCACCAGGgctggggagaaagcctggaccgcctggtgg                                         >  3:236553‑M1/1‑89 (MQ=255)                                                                                                                                 tCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCCACCAGGgctggggagaaagcctggaccgcctggtgg                                         <  4:236553‑M1/119‑31 (MQ=255)                                                                                                                                 tCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCCACCAGGCGGTCCAGGCTTTCTCCCCAGCCCTGGTGGAAGCCCATTTCTTCATGGGCCCGGCAGTCg           >  5:318828/1‑149 (MQ=255)                                                                                                                                          tACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCCACCAGGCGGTCCAGGCTTTCTCCCCAGCCCTGGTGGAAGCCCATTTCTTCATGGGCCCGGCAGTCGGTGGCATTc  <  1:17675/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                           GGGTTGGCGGGGATACCGTCGCGTTGCCAGCGTTCGACGGCAATGAAGAAGGCATCATGCATGGCCTCCTCGGCCAGGTCGAAATCACCCAGCAAGCGGATCAGTGTCGCCAG‑‑TATGCGCCGCGACTCCTGCCGGTACACAGCCTCGACTTCGGCACGCACCTGGGCCAGTGCGGCCATCAGTCGGGCATCCGCTGGGTCACCACCTCCACCAGGCGGTCCAGGCTTTCTCCCCAGCCCTGGTGGAAGCCCATTTCTTCATGGGCCCGGCAGTCGGTGGCATTC  >  NC_002947/5177824‑5178107

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.